RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 CHMP4CQ96CF2 233 aa10.63□□□□□ -0.71
SPTAN1-207ENST00000476825 PARK7Q99497 189 aaKnown RBP10.63□□□□□ -0.71
SPTAN1-207ENST00000476825 CPVLQ9H3G5 476 aa10.63□□□□□ -0.71
SPTAN1-207ENST00000476825 R3HDMLQ9H3Y0 253 aa10.63□□□□□ -0.71
SPTAN1-207ENST00000476825 RNF186Q9NXI6 227 aa10.63□□□□□ -0.71
SPTAN1-207ENST00000476825 SAGE1Q9NXZ1 904 aa10.63□□□□□ -0.71
SPTAN1-207ENST00000476825 PNMA3Q9UL41 463 aa10.63□□□□□ -0.71
SPTAN1-207ENST00000476825 MTMR7Q9Y216 660 aa10.63□□□□□ -0.71
SPTAN1-207ENST00000476825 SLC12A7Q9Y666 1083 aa10.63□□□□□ -0.71
SPTAN1-207ENST00000476825 MYH15Q9Y2K3 1946 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 CNTNAP5Q8WYK1 1306 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 GOLGA8BA8MQT2 603 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 TMEM232C9JQI7 657 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 ZBTB43O43298 467 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 CA12O43570 354 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 CYTH3O43739 400 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 RAD21O60216 631 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 FLOT1O75955 427 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 PLEKHA8P1O95397 391 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 ALDH1A1P00352 501 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 PARP1P09874 1014 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 CALM1P0DP23 149 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 CALM2P0DP24 149 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 CALM3P0DP25 149 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 BCRP11274 1271 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 OSBPP22059 807 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 PDIA3P30101 505 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 CDC27P30260 824 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 STAT2P52630 851 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 FUT2Q10981 343 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 FAM160B2Q86V87 743 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 IL27Q8NEV9 243 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 NUP133Q8WUM0 1156 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 ATG4CQ96DT6 458 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 MTMR8Q96EF0 704 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 ZNF274Q96GC6 653 aaPredicted RBP10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 P2RX7Q99572 595 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 SLF1Q9BQI6 1058 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 LARP6Q9BRS8 491 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 GPCPD1Q9NPB8 672 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 WBP1LQ9NX94 342 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 FEM1BQ9UK73 627 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 PRR12Q9ULL5 1215 aa10.62□□□□□ -0.71
SPTAN1-207ENST00000476825 ZNF536O15090 1300 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 MCM3APO60318 1980 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 FRMPD3Q5JV73 1810 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 GOLGA8AA7E2F4 631 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 TLR2O60603 784 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 PEX10O60683 326 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 SLC16A2P36021 539 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 IRX3P78415 501 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 FGD1P98174 961 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 COG2Q14746 738 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 ANKRD1Q15327 319 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 NTRK3Q16288 839 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 ME3Q16798 604 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 RTN1Q16799 776 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 SYDE2Q5VT97 1194 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 OTUD7BQ6GQQ9 843 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 C17orf99Q6UX52 265 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 TMTC3Q6ZXV5 915 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 CCDC144CPQ8IYA2 1237 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 FANCBQ8NB91 859 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 CTCFLQ8NI51 663 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 SPZ1Q9BXG8 430 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 RANBP17Q9H2T7 1088 aaKnown RBP10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 RIOX1Q9H6W3 641 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 TXNRD2Q9NNW7 524 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 BTBD7Q9P203 1132 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 RBPJLQ9UBG7 517 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 MORF4L1Q9UBU8 362 aa10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 ZNF214Q9UL59 606 aaPredicted RBP10.61□□□□□ -0.71
SPTAN1-207ENST00000476825 KLRF2D3W0D1 207 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 VWA5AO00534 786 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 PFKFB2O60825 505 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 SMARCA1P28370 1054 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 KIF5BP33176 963 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 GCLCP48506 637 aaPredicted RBP10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 METAP2P50579 478 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 MAP2K1Q02750 393 aaPredicted RBP10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 SCRN1Q12765 414 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 FAM110CQ1W6H9 321 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 NOM1Q5C9Z4 860 aaKnown RBP10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 SRBD1Q8N5C6 995 aaKnown RBP10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 PRPF38AQ8NAV1 312 aaKnown RBP10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 GTF3C2Q8WUA4 911 aaPredicted RBP10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 CHURC1Q8WUH1 139 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 GTF3C6Q969F1 213 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 UBA5Q9GZZ9 404 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 SLC38A10Q9HBR0 1119 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 RBM28Q9NW13 759 aaKnown RBP10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 KIAA1217Q5T5P2 1943 aa10.6□□□□□ -0.71
SPTAN1-207ENST00000476825 MYH7BA7E2Y1 1941 aa10.59□□□□□ -0.71
SPTAN1-207ENST00000476825 ATP2A1O14983 1001 aa10.59□□□□□ -0.71
SPTAN1-207ENST00000476825 ST18O60284 1047 aa10.59□□□□□ -0.71
SPTAN1-207ENST00000476825 PPP1R11O60927 126 aaPredicted RBP10.59□□□□□ -0.71
SPTAN1-207ENST00000476825 TRPA1O75762 1119 aa10.59□□□□□ -0.71
SPTAN1-207ENST00000476825 TMEM132BQ14DG7 1078 aa10.59□□□□□ -0.71
SPTAN1-207ENST00000476825 PPP2R5BQ15173 497 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms