RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CFAP45Q9UL16 551 aa33.21■■■□□ 2.91
VEGFA-211ENST00000476772 USP17L10C9JJH3 530 aa33.2■■■□□ 2.91
VEGFA-211ENST00000476772 FEZ1Q99689 392 aa33.2■■■□□ 2.91
VEGFA-211ENST00000476772 CEBPZQ03701 1054 aaKnown RBP33.2■■■□□ 2.9
VEGFA-211ENST00000476772 LEO1Q8WVC0 666 aaPredicted RBP33.2■■■□□ 2.9
VEGFA-211ENST00000476772 MTMR8Q96EF0 704 aa33.2■■■□□ 2.9
VEGFA-211ENST00000476772 SPATA32Q96LK8 384 aa33.2■■■□□ 2.9
VEGFA-211ENST00000476772 BRMS1Q9HCU9 246 aa33.2■■■□□ 2.9
VEGFA-211ENST00000476772 TMEM232C9JQI7 657 aa33.19■■■□□ 2.9
VEGFA-211ENST00000476772 PNMA8AQ86V59 439 aaPredicted RBP33.19■■■□□ 2.9
VEGFA-211ENST00000476772 CCDC148Q8NFR7 591 aa33.19■■■□□ 2.9
VEGFA-211ENST00000476772 GADD45BO75293 160 aaPredicted RBP33.18■■■□□ 2.9
VEGFA-211ENST00000476772 USP2O75604 605 aaPredicted RBP33.18■■■□□ 2.9
VEGFA-211ENST00000476772 PICK1Q9NRD5 415 aa33.18■■■□□ 2.9
VEGFA-211ENST00000476772 PNMA6FA0A0J9YX94 578 aa33.17■■■□□ 2.9
VEGFA-211ENST00000476772 FAM83BQ5T0W9 1011 aa33.17■■■□□ 2.9
VEGFA-211ENST00000476772 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.17■■■□□ 2.93e-6■□□□□ 9.7
VEGFA-211ENST00000476772 ELP1O95163 1332 aa33.17■■■□□ 2.9
VEGFA-211ENST00000476772 CALML3P27482 149 aa33.17■■■□□ 2.9
VEGFA-211ENST00000476772 NAPAP54920 295 aa33.17■■■□□ 2.9
VEGFA-211ENST00000476772 IKQ13123 557 aaPredicted RBP33.17■■■□□ 2.9
VEGFA-211ENST00000476772 SKOR2Q2VWA4 1001 aaPredicted RBP33.17■■■□□ 2.9
VEGFA-211ENST00000476772 CDCA5Q96FF9 252 aa33.17■■■□□ 2.9
VEGFA-211ENST00000476772 DDX49Q9Y6V7 483 aaKnown RBP33.17■■■□□ 2.9
VEGFA-211ENST00000476772 hCG_1984214I3L0E3 225 aa33.16■■■□□ 2.9
VEGFA-211ENST00000476772 ZBTB5O15062 677 aa33.16■■■□□ 2.9
VEGFA-211ENST00000476772 PTPRAP18433 802 aa33.16■■■□□ 2.9
VEGFA-211ENST00000476772 NOL9Q5SY16 702 aaKnown RBP33.16■■■□□ 2.9
VEGFA-211ENST00000476772 SYDE2Q5VT97 1194 aa33.16■■■□□ 2.9
VEGFA-211ENST00000476772 BTNL9Q6UXG8 535 aa33.16■■■□□ 2.9
VEGFA-211ENST00000476772 FAM177A1Q8N128 213 aaPredicted RBP33.16■■■□□ 2.9
VEGFA-211ENST00000476772 ZNF713Q8N859 430 aaPredicted RBP33.16■■■□□ 2.9
VEGFA-211ENST00000476772 KIAA1683Q9H0B3 1180 aa33.16■■■□□ 2.9
VEGFA-211ENST00000476772 PAPPA2Q9BXP8 1791 aa33.16■■■□□ 2.9
VEGFA-211ENST00000476772 ADAMTS3O15072 1205 aa33.15■■■□□ 2.9
VEGFA-211ENST00000476772 TNFRSF25Q93038 417 aa33.15■■■□□ 2.9
VEGFA-211ENST00000476772 PCDHA4Q9UN74 947 aa33.15■■■□□ 2.9
VEGFA-211ENST00000476772 PPP1R11O60927 126 aaPredicted RBP33.14■■■□□ 2.9
VEGFA-211ENST00000476772 GPT2Q8TD30 523 aa33.14■■■□□ 2.9
VEGFA-211ENST00000476772 CCDC12Q8WUD4 166 aaPredicted RBP33.14■■■□□ 2.9
VEGFA-211ENST00000476772 RTEL1Q9NZ71 1219 aa33.14■■■□□ 2.9
VEGFA-211ENST00000476772 CLIC4Q9Y696 253 aa33.14■■■□□ 2.9
VEGFA-211ENST00000476772 PHIPQ8WWQ0 1821 aa33.14■■■□□ 2.9
VEGFA-211ENST00000476772 OTOFQ9HC10 1997 aa33.14■■■□□ 2.89
VEGFA-211ENST00000476772 STAT2P52630 851 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 CDC37Q16543 378 aaPredicted RBP33.13■■■□□ 2.89
VEGFA-211ENST00000476772 BLIDQ8IZY5 108 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 COA7Q96BR5 231 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 WDR18Q9BV38 432 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 PPP1R12BO60237 982 aaPredicted RBP33.13■■■□□ 2.89
VEGFA-211ENST00000476772 POTEIP0CG38 1075 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 POTEJP0CG39 1038 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 QRICH1Q2TAL8 776 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 EARS2Q5JPH6 523 aaKnown RBP33.13■■■□□ 2.89
VEGFA-211ENST00000476772 DAGLBQ8NCG7 672 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 ZMYND12Q9H0C1 365 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 AS3MTQ9HBK9 375 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 POLR3EQ9NVU0 708 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 RCOR1Q9UKL0 485 aa33.13■■■□□ 2.89
VEGFA-211ENST00000476772 FAM205CA6NFA0 338 aa33.12■■■□□ 2.89
VEGFA-211ENST00000476772 UBE2HP62256 183 aa33.12■■■□□ 2.89
VEGFA-211ENST00000476772 MTMR2Q13614 643 aa33.12■■■□□ 2.89
VEGFA-211ENST00000476772 KLHL40Q2TBA0 621 aa33.12■■■□□ 2.89
VEGFA-211ENST00000476772 GALNT17Q6IS24 598 aa33.12■■■□□ 2.89
VEGFA-211ENST00000476772 CLEC11AQ9Y240 323 aa33.12■■■□□ 2.89
VEGFA-211ENST00000476772 SPP2Q13103 211 aa33.11■■■□□ 2.89
VEGFA-211ENST00000476772 DGKZQ13574 1117 aa33.11■■■□□ 2.89
VEGFA-211ENST00000476772 TPRNQ4KMQ1 711 aa33.11■■■□□ 2.89
VEGFA-211ENST00000476772 NOM1Q5C9Z4 860 aaKnown RBP33.11■■■□□ 2.89
VEGFA-211ENST00000476772 ANO1Q5XXA6 986 aa33.11■■■□□ 2.89
VEGFA-211ENST00000476772 PPP1R3FQ6ZSY5 799 aaPredicted RBP33.11■■■□□ 2.89
VEGFA-211ENST00000476772 PRR12Q9ULL5 1215 aa33.11■■■□□ 2.89
VEGFA-211ENST00000476772 SMCO2A6NFE2 343 aa33.1■■■□□ 2.89
VEGFA-211ENST00000476772 NF2P35240 595 aa33.1■■■□□ 2.89
VEGFA-211ENST00000476772 NASPP49321 788 aaPredicted RBP33.1■■■□□ 2.89
VEGFA-211ENST00000476772 TOB1P50616 345 aaPredicted RBP33.1■■■□□ 2.89
VEGFA-211ENST00000476772 MAP3K9P80192 1104 aa33.1■■■□□ 2.89
VEGFA-211ENST00000476772 ZNF280CQ8ND82 737 aa33.1■■■□□ 2.89
VEGFA-211ENST00000476772 LPAR1Q92633 364 aa33.1■■■□□ 2.89
VEGFA-211ENST00000476772 ZHX2Q9Y6X8 837 aa33.1■■■□□ 2.89
VEGFA-211ENST00000476772 SNAP25P60880 206 aa33.1■■■□□ 2.89
VEGFA-211ENST00000476772 VGLL4Q14135 290 aa33.1■■■□□ 2.89
VEGFA-211ENST00000476772 ESYT2A0FGR8 921 aa33.09■■■□□ 2.89
VEGFA-211ENST00000476772 M0R2N6 131 aa33.09■■■□□ 2.89
VEGFA-211ENST00000476772 RILPL1Q5EBL4 403 aa33.09■■■□□ 2.89
VEGFA-211ENST00000476772 LINC00301Q8NCQ3 95 aa33.09■■■□□ 2.89
VEGFA-211ENST00000476772 RASGRP4Q8TDF6 673 aa33.09■■■□□ 2.89
VEGFA-211ENST00000476772 RRAGCQ9HB90 399 aa33.09■■■□□ 2.89
VEGFA-211ENST00000476772 C6orf50Q9HD87 102 aa33.09■■■□□ 2.89
VEGFA-211ENST00000476772 SNCAIPQ9Y6H5 919 aa33.09■■■□□ 2.89
VEGFA-211ENST00000476772 WDR46O15213 610 aaKnown RBP33.08■■■□□ 2.89
VEGFA-211ENST00000476772 YEATS4O95619 227 aa33.08■■■□□ 2.89
VEGFA-211ENST00000476772 MBD3O95983 291 aa33.08■■■□□ 2.89
VEGFA-211ENST00000476772 USP14P54578 494 aa33.08■■■□□ 2.89
VEGFA-211ENST00000476772 STK38Q15208 465 aa33.08■■■□□ 2.89
VEGFA-211ENST00000476772 SF3A1Q15459 793 aaKnown RBP33.08■■■□□ 2.89
VEGFA-211ENST00000476772 PPP1R18Q6NYC8 613 aa33.08■■■□□ 2.89
VEGFA-211ENST00000476772 CHURC1Q8WUH1 139 aa33.08■■■□□ 2.89
VEGFA-211ENST00000476772 EMILIN3Q9NT22 766 aa33.08■■■□□ 2.89
VEGFA-211ENST00000476772 PLA2G6O60733 806 aa33.07■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms