RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 ABRAQ8N0Z2 381 aa7.98□□□□□ -1.13
CLDN4-205ENST00000476494 SHCBP1Q8NEM2 672 aa7.98□□□□□ -1.13
CLDN4-205ENST00000476494 ARHGAP45Q92619 1136 aa7.98□□□□□ -1.13
CLDN4-205ENST00000476494 HIPK3Q9H422 1215 aa7.98□□□□□ -1.13
CLDN4-205ENST00000476494 CWC22Q9HCG8 908 aaKnown RBP7.98□□□□□ -1.13
CLDN4-205ENST00000476494 SMC4Q9NTJ3 1288 aa7.98□□□□□ -1.13
CLDN4-205ENST00000476494 HERC5Q9UII4 1024 aaKnown RBP7.98□□□□□ -1.13
CLDN4-205ENST00000476494 GRIN2DO15399 1336 aa7.98□□□□□ -1.13
CLDN4-205ENST00000476494 CDK5RAP2Q96SN8 1893 aa7.98□□□□□ -1.13
CLDN4-205ENST00000476494 SIP14410 1827 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 GPR75-ASB3A0A0A6YYF3 556 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 A0A0U1RQG5 324 aaPredicted RBP7.97□□□□□ -1.13
CLDN4-205ENST00000476494 LCHNA4D1U4 455 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 ADCY6O43306 1168 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 BCAR3O75815 825 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 AKR1A1P14550 325 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 HOXB3P14651 431 aaPredicted RBP7.97□□□□□ -1.13
CLDN4-205ENST00000476494 ERCC3P19447 782 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 LTBRP36941 435 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 NKX3-2P78367 333 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 ZKSCAN2Q63HK3 967 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 DGLUCYQ7Z3D6 616 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 HERC6Q8IVU3 1022 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 RPUSD2Q8IZ73 545 aaKnown RBP7.97□□□□□ -1.13
CLDN4-205ENST00000476494 ADSSL1Q8N142 457 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 DNAAF4Q8WXU2 420 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 SSH1Q8WYL5 1049 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 ASIC4Q96FT7 647 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 SCLYQ96I15 445 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 GLT1D1Q96MS3 346 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 TINF2Q9BSI4 451 aa7.97□□□□□ -1.13
CLDN4-205ENST00000476494 ANKRD11Q6UB99 2663 aaPredicted RBP7.97□□□□□ -1.13
CLDN4-205ENST00000476494 SETXQ7Z333 2677 aaKnown RBP7.97□□□□□ -1.13
CLDN4-205ENST00000476494 ZBBXA8MT70 800 aa7.96□□□□□ -1.14
CLDN4-205ENST00000476494 BTDP43251 543 aa7.96□□□□□ -1.14
CLDN4-205ENST00000476494 NUBP1P53384 320 aa7.96□□□□□ -1.14
CLDN4-205ENST00000476494 ZXDAP98168 799 aa7.96□□□□□ -1.14
CLDN4-205ENST00000476494 SMAD2Q15796 467 aaKnown RBP7.96□□□□□ -1.14
CLDN4-205ENST00000476494 BEND3Q5T5X7 828 aa7.96□□□□□ -1.14
CLDN4-205ENST00000476494 SUGP1Q8IWZ8 645 aaKnown RBP7.96□□□□□ -1.14
CLDN4-205ENST00000476494 SLC9A7Q96T83 725 aa7.96□□□□□ -1.14
CLDN4-205ENST00000476494 STK31Q9BXU1 1019 aa7.96□□□□□ -1.14
CLDN4-205ENST00000476494 SPATC1LQ9H0A9 340 aa7.96□□□□□ -1.14
CLDN4-205ENST00000476494 UPF3AQ9H1J1 476 aaKnown RBP7.96□□□□□ -1.14
CLDN4-205ENST00000476494 CHMP4BQ9H444 224 aaKnown RBP7.96□□□□□ -1.14
CLDN4-205ENST00000476494 GINM1Q9NU53 330 aa7.96□□□□□ -1.14
CLDN4-205ENST00000476494 DLL3Q9NYJ7 618 aa7.96□□□□□ -1.14
CLDN4-205ENST00000476494 FRYLO94915 3013 aa7.95□□□□□ -1.14
CLDN4-205ENST00000476494 CACNA1FO60840 1977 aa7.95□□□□□ -1.14
CLDN4-205ENST00000476494 TLR3O15455 904 aaKnown RBP7.95□□□□□ -1.14
CLDN4-205ENST00000476494 DUSP11O75319 330 aaKnown RBP7.95□□□□□ -1.14
CLDN4-205ENST00000476494 SNAI1O95863 264 aaPredicted RBP7.95□□□□□ -1.14
CLDN4-205ENST00000476494 VCAM1P19320 739 aa7.95□□□□□ -1.14
CLDN4-205ENST00000476494 ERVK-21P61565 698 aa7.95□□□□□ -1.14
CLDN4-205ENST00000476494 ACAP1Q15027 740 aa7.95□□□□□ -1.14
CLDN4-205ENST00000476494 ZNF792Q3KQV3 632 aa7.95□□□□□ -1.14
CLDN4-205ENST00000476494 METTL24Q5JXM2 366 aa7.95□□□□□ -1.14
CLDN4-205ENST00000476494 MRPL50Q8N5N7 158 aaKnown RBP7.95□□□□□ -1.14
CLDN4-205ENST00000476494 PABPC5Q96DU9 382 aaKnown RBP7.95□□□□□ -1.14
CLDN4-205ENST00000476494 API5Q9BZZ5 524 aaKnown RBP7.95□□□□□ -1.14
CLDN4-205ENST00000476494 SLC5A4Q9NY91 659 aa7.95□□□□□ -1.14
CLDN4-205ENST00000476494 ZBTB21Q9ULJ3 1066 aa7.95□□□□□ -1.14
CLDN4-205ENST00000476494 DIS3Q9Y2L1 958 aaKnown RBP7.95□□□□□ -1.14
CLDN4-205ENST00000476494 PTPRCP08575 1304 aa7.95□□□□□ -1.14
CLDN4-205ENST00000476494 OTOGLQ3ZCN5 2332 aa7.95□□□□□ -1.14
CLDN4-205ENST00000476494 ATG2AQ2TAZ0 1938 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 MCM3APO60318 1980 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 GRM8O00222 908 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 GALR2O43603 387 aaPredicted RBP7.94□□□□□ -1.14
CLDN4-205ENST00000476494 B4GALT4O60513 344 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 PFKMP08237 780 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 GJA9P57773 515 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 FLIIQ13045 1269 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 PUM3Q15397 648 aaKnown RBP7.94□□□□□ -1.14
CLDN4-205ENST00000476494 ST3GAL2Q16842 350 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 ATF7IPQ6VMQ6 1270 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 PCSK9Q8NBP7 692 aaKnown RBP7.94□□□□□ -1.14
CLDN4-205ENST00000476494 FRAT1Q92837 279 aaPredicted RBP7.94□□□□□ -1.14
CLDN4-205ENST00000476494 TRPV6Q9H1D0 765 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 PPP4R2Q9NY27 417 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 PI4KBQ9UBF8 816 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 NOB1Q9ULX3 412 aaKnown RBP7.94□□□□□ -1.14
CLDN4-205ENST00000476494 MROH7-TTC4A0A0A0MT08 1334 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 ASPMQ8IZT6 3477 aa7.94□□□□□ -1.14
CLDN4-205ENST00000476494 GDF11O95390 407 aa7.93□□□□□ -1.14
CLDN4-205ENST00000476494 IFIT1P09914 478 aaKnown RBP7.93□□□□□ -1.14
CLDN4-205ENST00000476494 PUM1Q14671 1186 aaKnown RBP eCLIP7.93□□□□□ -1.14
CLDN4-205ENST00000476494 CTC1Q2NKJ3 1217 aa7.93□□□□□ -1.14
CLDN4-205ENST00000476494 RABL6Q3YEC7 729 aaPredicted RBP7.93□□□□□ -1.14
CLDN4-205ENST00000476494 FTSJ3Q8IY81 847 aaKnown RBP7.93□□□□□ -1.14
CLDN4-205ENST00000476494 NKD2Q969F2 451 aaPredicted RBP7.93□□□□□ -1.14
CLDN4-205ENST00000476494 SUCLG2Q96I99 432 aa7.93□□□□□ -1.14
CLDN4-205ENST00000476494 KIAA1683Q9H0B3 1180 aa7.93□□□□□ -1.14
CLDN4-205ENST00000476494 MROH8Q9H579 483 aa7.93□□□□□ -1.14
CLDN4-205ENST00000476494 FAM50BQ9Y247 325 aa7.93□□□□□ -1.14
CLDN4-205ENST00000476494 COL11A1P12107 1806 aaPredicted RBP7.93□□□□□ -1.14
CLDN4-205ENST00000476494 PARP14Q460N5 1801 aa7.93□□□□□ -1.14
CLDN4-205ENST00000476494 TRIP12Q14669 1992 aaPredicted RBP7.92□□□□□ -1.14
CLDN4-205ENST00000476494 MYO10Q9HD67 2058 aa7.92□□□□□ -1.14
CLDN4-205ENST00000476494 LINC01553A4QN01 128 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms