RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 HOXC10Q9NYD6 342 aa25.86■■□□□ 1.73
MCF2L2-209ENST00000475664 HPS5Q9UPZ3 1129 aa25.86■■□□□ 1.73
MCF2L2-209ENST00000475664 TLR2O60603 784 aa25.85■■□□□ 1.73
MCF2L2-209ENST00000475664 KIF5BP33176 963 aa25.85■■□□□ 1.73
MCF2L2-209ENST00000475664 SLC16A2P36021 539 aa25.85■■□□□ 1.73
MCF2L2-209ENST00000475664 FANCBQ8NB91 859 aa25.85■■□□□ 1.73
MCF2L2-209ENST00000475664 IL27Q8NEV9 243 aa25.85■■□□□ 1.73
MCF2L2-209ENST00000475664 R3HDMLQ9H3Y0 253 aa25.85■■□□□ 1.73
MCF2L2-209ENST00000475664 ADAMTS5Q9UNA0 930 aa25.85■■□□□ 1.73
MCF2L2-209ENST00000475664 PDIA3P30101 505 aaKnown RBP25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 GCLCP48506 637 aaPredicted RBP25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 IKQ13123 557 aaPredicted RBP25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 SYDE2Q5VT97 1194 aa25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 CCDC144CPQ8IYA2 1237 aa25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 GTF3C2Q8WUA4 911 aaPredicted RBP25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 KIFC2Q96AC6 838 aa25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 BEGAINQ9BUH8 593 aa25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 CPVLQ9H3G5 476 aa25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 PRR12Q9ULL5 1215 aa25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 TPCN1Q9ULQ1 816 aa25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 NAP1L2Q9ULW6 460 aaPredicted RBP25.84■■□□□ 1.73
MCF2L2-209ENST00000475664 GOLGA8AA7E2F4 631 aa25.83■■□□□ 1.73
MCF2L2-209ENST00000475664 KLRF2D3W0D1 207 aa25.83■■□□□ 1.73
MCF2L2-209ENST00000475664 TBC1D8O95759 1140 aa25.83■■□□□ 1.73
MCF2L2-209ENST00000475664 SAMD1Q6SPF0 538 aaPredicted RBP25.83■■□□□ 1.73
MCF2L2-209ENST00000475664 ZNF274Q96GC6 653 aaPredicted RBP25.83■■□□□ 1.73
MCF2L2-209ENST00000475664 UBA5Q9GZZ9 404 aa25.83■■□□□ 1.73
MCF2L2-209ENST00000475664 BCRP11274 1271 aa25.82■■□□□ 1.72
MCF2L2-209ENST00000475664 METAP2P50579 478 aaKnown RBP eCLIP25.82■■□□□ 1.72
MCF2L2-209ENST00000475664 RTN1Q16799 776 aa25.82■■□□□ 1.72
MCF2L2-209ENST00000475664 SLC35G1Q2M3R5 365 aa25.82■■□□□ 1.72
MCF2L2-209ENST00000475664 C17orf99Q6UX52 265 aa25.82■■□□□ 1.72
MCF2L2-209ENST00000475664 FAM217BQ9NTX9 383 aaPredicted RBP25.82■■□□□ 1.72
MCF2L2-209ENST00000475664 RBPJLQ9UBG7 517 aa25.82■■□□□ 1.72
MCF2L2-209ENST00000475664 PCNTO95613 3336 aa25.82■■□□□ 1.72
MCF2L2-209ENST00000475664 VWA5AO00534 786 aa25.81■■□□□ 1.72
MCF2L2-209ENST00000475664 CNMDO75829 334 aa25.81■■□□□ 1.72
MCF2L2-209ENST00000475664 GNAQP50148 359 aa25.81■■□□□ 1.72
MCF2L2-209ENST00000475664 NOL8Q76FK4 1167 aaKnown RBP25.81■■□□□ 1.72
MCF2L2-209ENST00000475664 MB21D1Q8N884 522 aa25.81■■□□□ 1.72
MCF2L2-209ENST00000475664 REPS2Q8NFH8 660 aa25.81■■□□□ 1.72
MCF2L2-209ENST00000475664 TXNRD2Q9NNW7 524 aa25.81■■□□□ 1.72
MCF2L2-209ENST00000475664 RBM28Q9NW13 759 aaKnown RBP25.81■■□□□ 1.72
MCF2L2-209ENST00000475664 MORF4L1Q9UBU8 362 aa25.81■■□□□ 1.72
MCF2L2-209ENST00000475664 CPA4Q9UI42 421 aa25.81■■□□□ 1.72
MCF2L2-209ENST00000475664 RABGAP1Q9Y3P9 1069 aa25.81■■□□□ 1.72
MCF2L2-209ENST00000475664 ST18O60284 1047 aa25.8■■□□□ 1.72
MCF2L2-209ENST00000475664 PLEKHA8P1O95397 391 aa25.8■■□□□ 1.72
MCF2L2-209ENST00000475664 FDX1P10109 184 aa25.8■■□□□ 1.72
MCF2L2-209ENST00000475664 CDC27P30260 824 aa25.8■■□□□ 1.72
MCF2L2-209ENST00000475664 PPP2R5BQ15173 497 aa25.8■■□□□ 1.72
MCF2L2-209ENST00000475664 TMTC3Q6ZXV5 915 aa25.8■■□□□ 1.72
MCF2L2-209ENST00000475664 NBPF11Q86T75 865 aa25.8■■□□□ 1.72
MCF2L2-209ENST00000475664 LZTS2Q9BRK4 669 aa25.8■■□□□ 1.72
MCF2L2-209ENST00000475664 SLC38A10Q9HBR0 1119 aa25.8■■□□□ 1.72
MCF2L2-209ENST00000475664 BTBD7Q9P203 1132 aa25.8■■□□□ 1.72
MCF2L2-209ENST00000475664 BAZ2BQ9UIF8 2168 aaKnown RBP25.79■■□□□ 1.72
MCF2L2-209ENST00000475664 MYH6P13533 1939 aa25.79■■□□□ 1.72
MCF2L2-209ENST00000475664 PEX10O60683 326 aa25.79■■□□□ 1.72
MCF2L2-209ENST00000475664 FAM110CQ1W6H9 321 aa25.79■■□□□ 1.72
MCF2L2-209ENST00000475664 ADGRF4Q8IZF3 695 aa25.79■■□□□ 1.72
MCF2L2-209ENST00000475664 ANKRD13CQ8N6S4 541 aa25.79■■□□□ 1.72
MCF2L2-209ENST00000475664 PAGR1Q9BTK6 254 aa25.79■■□□□ 1.72
MCF2L2-209ENST00000475664 RANBP17Q9H2T7 1088 aaKnown RBP25.79■■□□□ 1.72
MCF2L2-209ENST00000475664 RIOX1Q9H6W3 641 aa25.79■■□□□ 1.72
MCF2L2-209ENST00000475664 CYTH3O43739 400 aa25.78■■□□□ 1.72
MCF2L2-209ENST00000475664 ZBED4O75132 1171 aa25.78■■□□□ 1.72
MCF2L2-209ENST00000475664 LARGE1O95461 756 aa25.78■■□□□ 1.72
MCF2L2-209ENST00000475664 SMARCA1P28370 1054 aa25.78■■□□□ 1.72
MCF2L2-209ENST00000475664 TMEM132BQ14DG7 1078 aa25.78■■□□□ 1.72
MCF2L2-209ENST00000475664 SRBD1Q8N5C6 995 aaKnown RBP25.78■■□□□ 1.72
MCF2L2-209ENST00000475664 SPZ1Q9BXG8 430 aa25.78■■□□□ 1.72
MCF2L2-209ENST00000475664 JMJD4Q9H9V9 463 aa25.78■■□□□ 1.72
MCF2L2-209ENST00000475664 ZNF214Q9UL59 606 aaPredicted RBP25.78■■□□□ 1.72
MCF2L2-209ENST00000475664 LIMCH1Q9UPQ0 1083 aa25.78■■□□□ 1.72
MCF2L2-209ENST00000475664 CCDC196A0A1B0GTZ2 297 aa25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 PFKFB2O60825 505 aa25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 CD2BP2O95400 341 aaKnown RBP25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 ADD1P35611 737 aaKnown RBP25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 SNAP25P60880 206 aa25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 ERVK-9P63128 1117 aa25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 ERVK-24P63145 666 aa25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 CCT2P78371 535 aaKnown RBP25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 STK3Q13188 491 aa25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 ME3Q16798 604 aa25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 NOM1Q5C9Z4 860 aaKnown RBP25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 CMTR1Q8N1G2 835 aaKnown RBP25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 MTMR8Q96EF0 704 aa25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 NCOA5Q9HCD5 579 aaKnown RBP25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 TSKSQ9UJT2 592 aa25.77■■□□□ 1.72
MCF2L2-209ENST00000475664 FUT2Q10981 343 aa25.76■■□□□ 1.71
MCF2L2-209ENST00000475664 GPRC5AQ8NFJ5 357 aa25.76■■□□□ 1.71
MCF2L2-209ENST00000475664 SLKQ9H2G2 1235 aaPredicted RBP25.76■■□□□ 1.71
MCF2L2-209ENST00000475664 ZNF536O15090 1300 aa25.76■■□□□ 1.71
MCF2L2-209ENST00000475664 CNTNAP5Q8WYK1 1306 aa25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 GPR25O00155 361 aa25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 ATP2A1O14983 1001 aa25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 DHX16O60231 1041 aaKnown RBP25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 HSPA1AP0DMV8 641 aaKnown RBP25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 HSPA1BP0DMV9 641 aaKnown RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms