RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 HAUS7Q99871 368 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 ZMYM5Q9UJ78 669 aa10.24□□□□□ -0.77
SMC5-203ENST00000475540 A0A087WZG4 1122 aa10.23□□□□□ -0.77
SMC5-203ENST00000475540 BMP8BP34820 402 aa10.23□□□□□ -0.77
SMC5-203ENST00000475540 KCNMB1Q16558 191 aa10.23□□□□□ -0.77
SMC5-203ENST00000475540 KIAA1211LQ6NV74 962 aa10.23□□□□□ -0.77
SMC5-203ENST00000475540 ADAT2Q7Z6V5 191 aaKnown RBP10.23□□□□□ -0.77
SMC5-203ENST00000475540 ZSWIM9Q86XI8 627 aa10.23□□□□□ -0.77
SMC5-203ENST00000475540 MYLIPQ8WY64 445 aa10.23□□□□□ -0.77
SMC5-203ENST00000475540 PRKAG3Q9UGI9 489 aa10.23□□□□□ -0.77
SMC5-203ENST00000475540 RNF114Q9Y508 228 aa10.23□□□□□ -0.77
SMC5-203ENST00000475540 FHOD1Q9Y613 1164 aa10.23□□□□□ -0.77
SMC5-203ENST00000475540 FKTNO75072 461 aa10.22□□□□□ -0.77
SMC5-203ENST00000475540 ENDOUP21128 410 aaKnown RBP10.22□□□□□ -0.77
SMC5-203ENST00000475540 CTSKP43235 329 aa10.22□□□□□ -0.77
SMC5-203ENST00000475540 NAALADL2Q58DX5 795 aa10.22□□□□□ -0.77
SMC5-203ENST00000475540 FYB2Q5VWT5 728 aa10.22□□□□□ -0.77
SMC5-203ENST00000475540 GBP3Q9H0R5 595 aa10.22□□□□□ -0.77
SMC5-203ENST00000475540 ACTR10Q9NZ32 417 aa10.22□□□□□ -0.77
SMC5-203ENST00000475540 WHRNQ9P202 907 aa10.22□□□□□ -0.77
SMC5-203ENST00000475540 ZNF281Q9Y2X9 895 aa10.22□□□□□ -0.77
SMC5-203ENST00000475540 SF3B6Q9Y3B4 125 aaKnown RBP10.22□□□□□ -0.77
SMC5-203ENST00000475540 CBFA2T2O43439 604 aa10.21□□□□□ -0.77
SMC5-203ENST00000475540 HPXP02790 462 aa10.21□□□□□ -0.77
SMC5-203ENST00000475540 VAV1P15498 845 aa10.21□□□□□ -0.77
SMC5-203ENST00000475540 ERVFC1P60507 584 aa10.21□□□□□ -0.77
SMC5-203ENST00000475540 TMEM67Q5HYA8 995 aa10.21□□□□□ -0.77
SMC5-203ENST00000475540 ABHD4Q8TB40 342 aa10.21□□□□□ -0.77
SMC5-203ENST00000475540 KLHL6Q8WZ60 621 aa10.21□□□□□ -0.77
SMC5-203ENST00000475540 ZNF408Q9H9D4 720 aa10.21□□□□□ -0.77
SMC5-203ENST00000475540 DIS3Q9Y2L1 958 aaKnown RBP10.21□□□□□ -0.77
SMC5-203ENST00000475540 R3HCC1Q9Y3T6 440 aaKnown RBP10.21□□□□□ -0.77
SMC5-203ENST00000475540 FITM1A5D6W6 292 aa10.2□□□□□ -0.78
SMC5-203ENST00000475540 PPM1BO75688 479 aa10.2□□□□□ -0.78
SMC5-203ENST00000475540 NOP2P46087 812 aaKnown RBP10.2□□□□□ -0.78
SMC5-203ENST00000475540 CHRNEQ04844 493 aa10.2□□□□□ -0.78
SMC5-203ENST00000475540 NCAPHQ15003 741 aa10.2□□□□□ -0.78
SMC5-203ENST00000475540 CARMIL2Q6F5E8 1435 aa10.2□□□□□ -0.78
SMC5-203ENST00000475540 CRTC3Q6UUV7 619 aa10.2□□□□□ -0.78
SMC5-203ENST00000475540 FIBCD1Q8N539 461 aa10.2□□□□□ -0.78
SMC5-203ENST00000475540 ANKS4BQ8N8V4 417 aa10.2□□□□□ -0.78
SMC5-203ENST00000475540 LINC01599Q8WXQ3 324 aa10.2□□□□□ -0.78
SMC5-203ENST00000475540 NOL6Q9H6R4 1146 aaKnown RBP10.2□□□□□ -0.78
SMC5-203ENST00000475540 TMEM82A0PJX8 343 aa10.19□□□□□ -0.78
SMC5-203ENST00000475540 EPHX1P07099 455 aa10.19□□□□□ -0.78
SMC5-203ENST00000475540 LCE3BQ5TA77 95 aa10.19□□□□□ -0.78
SMC5-203ENST00000475540 LARP1BQ659C4 914 aaKnown RBP10.19□□□□□ -0.78
SMC5-203ENST00000475540 FGD4Q96M96 766 aa10.19□□□□□ -0.78
SMC5-203ENST00000475540 CDADC1Q9BWV3 514 aa10.19□□□□□ -0.78
SMC5-203ENST00000475540 KLHL25Q9H0H3 589 aa10.19□□□□□ -0.78
SMC5-203ENST00000475540 H0Y8X5 98 aa10.18□□□□□ -0.78
SMC5-203ENST00000475540 ZNF205O95201 554 aa10.18□□□□□ -0.78
SMC5-203ENST00000475540 GLI1P08151 1106 aa10.18□□□□□ -0.78
SMC5-203ENST00000475540 POU4F1Q01851 419 aa10.18□□□□□ -0.78
SMC5-203ENST00000475540 LILRA2Q8N149 483 aa10.18□□□□□ -0.78
SMC5-203ENST00000475540 APBA2Q99767 749 aa10.18□□□□□ -0.78
SMC5-203ENST00000475540 EBF1Q9UH73 591 aa10.18□□□□□ -0.78
SMC5-203ENST00000475540 SUGT1Q9Y2Z0 365 aa10.18□□□□□ -0.78
SMC5-203ENST00000475540 ANKRD34BA5PLL1 514 aa10.17□□□□□ -0.78
SMC5-203ENST00000475540 NAT2P11245 290 aa10.17□□□□□ -0.78
SMC5-203ENST00000475540 PPP2R5DQ14738 602 aa10.17□□□□□ -0.78
SMC5-203ENST00000475540 NR0B2Q15466 257 aa10.17□□□□□ -0.78
SMC5-203ENST00000475540 FXNQ16595 210 aa10.17□□□□□ -0.78
SMC5-203ENST00000475540 ZPBP2Q6X784 338 aa10.17□□□□□ -0.78
SMC5-203ENST00000475540 ADCY4Q8NFM4 1077 aa10.17□□□□□ -0.78
SMC5-203ENST00000475540 MAP6Q96JE9 813 aa10.17□□□□□ -0.78
SMC5-203ENST00000475540 G6PC3Q9BUM1 346 aa10.17□□□□□ -0.78
SMC5-203ENST00000475540 FAM53CQ9NYF3 392 aa10.17□□□□□ -0.78
SMC5-203ENST00000475540 GSTM1P09488 218 aa10.16□□□□□ -0.78
SMC5-203ENST00000475540 TRHRP34981 398 aaPredicted RBP10.16□□□□□ -0.78
SMC5-203ENST00000475540 KIR2DL1P43626 348 aaPredicted RBP10.16□□□□□ -0.78
SMC5-203ENST00000475540 KIR2DL2P43627 348 aaPredicted RBP10.16□□□□□ -0.78
SMC5-203ENST00000475540 SLC14A2Q15849 920 aa10.16□□□□□ -0.78
SMC5-203ENST00000475540 FCRL2Q96LA5 508 aaPredicted RBP10.16□□□□□ -0.78
SMC5-203ENST00000475540 ZDHHC15Q96MV8 337 aa10.16□□□□□ -0.78
SMC5-203ENST00000475540 C8orf37Q96NL8 207 aa10.16□□□□□ -0.78
SMC5-203ENST00000475540 C19orf44Q9H6X5 657 aa10.16□□□□□ -0.78
SMC5-203ENST00000475540 AP5S1Q9NUS5 200 aa10.16□□□□□ -0.78
SMC5-203ENST00000475540 DDAH1O94760 285 aa10.15□□□□□ -0.78
SMC5-203ENST00000475540 ZNF143P52747 638 aaPredicted RBP10.15□□□□□ -0.78
SMC5-203ENST00000475540 C6orf15Q6UXA7 325 aaPredicted RBP10.15□□□□□ -0.78
SMC5-203ENST00000475540 FAM178BQ8IXR5 827 aa10.15□□□□□ -0.78
SMC5-203ENST00000475540 RCC1LQ96I51 464 aaKnown RBP10.15□□□□□ -0.78
SMC5-203ENST00000475540 FMNL2Q96PY5 1086 aa10.15□□□□□ -0.78
SMC5-203ENST00000475540 KRTAP4-12Q9BQ66 201 aa10.15□□□□□ -0.78
SMC5-203ENST00000475540 SLC12A9Q9BXP2 914 aa10.15□□□□□ -0.78
SMC5-203ENST00000475540 TNFRSF10DQ9UBN6 386 aa10.15□□□□□ -0.78
SMC5-203ENST00000475540 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.15□□□□□ -0.78
SMC5-203ENST00000475540 TXKP42681 527 aa10.14□□□□□ -0.79
SMC5-203ENST00000475540 SNX17Q15036 470 aa10.14□□□□□ -0.79
SMC5-203ENST00000475540 MPZL3Q6UWV2 235 aa10.14□□□□□ -0.79
SMC5-203ENST00000475540 ANKS3Q6ZW76 656 aa10.14□□□□□ -0.79
SMC5-203ENST00000475540 SP110Q9HB58 689 aa10.14□□□□□ -0.79
SMC5-203ENST00000475540 SUSD2Q9UGT4 822 aa10.14□□□□□ -0.79
SMC5-203ENST00000475540 ZNF503-AS2A6NEH8 195 aa10.13□□□□□ -0.79
SMC5-203ENST00000475540 RTP2Q5QGT7 225 aa10.13□□□□□ -0.79
SMC5-203ENST00000475540 CEP128Q6ZU80 1094 aa10.13□□□□□ -0.79
SMC5-203ENST00000475540 ARHGEF39Q8N4T4 335 aa10.13□□□□□ -0.79
SMC5-203ENST00000475540 HHIPL1Q96JK4 782 aa10.13□□□□□ -0.79
SMC5-203ENST00000475540 FCRL3Q96P31 734 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms