RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 NEDD1Q8NHV4 660 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 LEO1Q8WVC0 666 aaPredicted RBP7.56□□□□□ -1.2
SDHB-205ENST00000475506 RNF141Q8WVD5 230 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 ASPNQ9BXN1 380 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 NOL6Q9H6R4 1146 aaKnown RBP7.56□□□□□ -1.2
SDHB-205ENST00000475506 MCM8Q9UJA3 840 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 FBXL21Q9UKT6 434 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 PCDHB12Q9Y5F1 795 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 FHOD1Q9Y613 1164 aa7.56□□□□□ -1.2
SDHB-205ENST00000475506 ASXL2Q76L83 1435 aa7.55□□□□□ -1.2
SDHB-205ENST00000475506 POU3F2P20265 443 aaPredicted RBP7.55□□□□□ -1.2
SDHB-205ENST00000475506 GABREP78334 506 aa7.55□□□□□ -1.2
SDHB-205ENST00000475506 SEPT7Q16181 437 aaKnown RBP7.55□□□□□ -1.2
SDHB-205ENST00000475506 PKN3Q6P5Z2 889 aa7.55□□□□□ -1.2
SDHB-205ENST00000475506 SEZ6L2Q6UXD5 910 aa7.55□□□□□ -1.2
SDHB-205ENST00000475506 Q6ZS46 218 aa7.55□□□□□ -1.2
SDHB-205ENST00000475506 FIBCD1Q8N539 461 aa7.55□□□□□ -1.2
SDHB-205ENST00000475506 TMEM145Q8NBT3 493 aa7.55□□□□□ -1.2
SDHB-205ENST00000475506 SYTL5Q8TDW5 730 aaPredicted RBP7.55□□□□□ -1.2
SDHB-205ENST00000475506 FBLIM1Q8WUP2 373 aa7.55□□□□□ -1.2
SDHB-205ENST00000475506 UBL7Q96S82 380 aaPredicted RBP7.55□□□□□ -1.2
SDHB-205ENST00000475506 NKX2-4Q9H2Z4 354 aa7.55□□□□□ -1.2
SDHB-205ENST00000475506 MINPP1Q9UNW1 487 aa7.55□□□□□ -1.2
SDHB-205ENST00000475506 EID1Q9Y6B2 187 aa7.55□□□□□ -1.2
SDHB-205ENST00000475506 GNB5O14775 395 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 VAMP4O75379 141 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 ARHGEF15O94989 841 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 PMLP29590 882 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 SGO2Q562F6 1265 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 NOL9Q5SY16 702 aaKnown RBP7.54□□□□□ -1.2
SDHB-205ENST00000475506 SLC35F1Q5T1Q4 408 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 GPAT2Q6NUI2 795 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 POMZP3Q6PJE2 187 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 TMC3Q7Z5M5 1100 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 ATL2Q8NHH9 583 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 CEP89Q96ST8 783 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 PRDM10Q9NQV6 1147 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 GFOD1Q9NXC2 390 aa7.54□□□□□ -1.2
SDHB-205ENST00000475506 ALG1L2C9J202 215 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 RASGRP1O95267 797 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 EOMESO95936 686 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 SCG5P05408 212 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 ETV3P41162 512 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 USP11P51784 963 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 MAP4K2Q12851 820 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 STRN3Q13033 797 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 CDK5R2Q13319 367 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 DDX46Q7L014 1031 aaKnown RBP7.53□□□□□ -1.2
SDHB-205ENST00000475506 PPM1KQ8N3J5 372 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 KCTD13Q8WZ19 329 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 EZH1Q92800 747 aaPredicted RBP7.53□□□□□ -1.2
SDHB-205ENST00000475506 PTPRN2Q92932 1015 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 FAM46AQ96IP4 442 aaKnown RBP7.53□□□□□ -1.2
SDHB-205ENST00000475506 ZDHHC15Q96MV8 337 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 MCMBPQ9BTE3 642 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 AKTIPQ9H8T0 292 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 DIS3Q9Y2L1 958 aaKnown RBP7.53□□□□□ -1.2
SDHB-205ENST00000475506 GPR55Q9Y2T6 319 aaPredicted RBP7.53□□□□□ -1.2
SDHB-205ENST00000475506 TRAF6Q9Y4K3 522 aa7.53□□□□□ -1.2
SDHB-205ENST00000475506 PHLDB1Q86UU1 1377 aa7.52□□□□□ -1.21
SDHB-205ENST00000475506 TCRBV16S1A1N1A0A5B0 115 aa7.52□□□□□ -1.21
SDHB-205ENST00000475506 KPNA6O60684 536 aa7.52□□□□□ -1.21
SDHB-205ENST00000475506 KATNA1O75449 491 aa7.52□□□□□ -1.21
SDHB-205ENST00000475506 ALDH1L1O75891 902 aa7.52□□□□□ -1.21
SDHB-205ENST00000475506 SNRPB2P08579 225 aaKnown RBP7.52□□□□□ -1.21
SDHB-205ENST00000475506 HOXC12P31275 282 aa7.52□□□□□ -1.21
SDHB-205ENST00000475506 KCNJ6P48051 423 aa7.52□□□□□ -1.21
SDHB-205ENST00000475506 GUCY2FP51841 1108 aa7.52□□□□□ -1.21
SDHB-205ENST00000475506 GRB10Q13322 594 aa7.52□□□□□ -1.21
SDHB-205ENST00000475506 CRACR2BQ8N4Y2 399 aaPredicted RBP7.52□□□□□ -1.21
SDHB-205ENST00000475506 KREMEN2Q8NCW0 462 aa7.52□□□□□ -1.21
SDHB-205ENST00000475506 C1GALT1Q9NS00 363 aa7.52□□□□□ -1.21
SDHB-205ENST00000475506 H0Y8X5 98 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 ARNTLO00327 626 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 OPA1O60313 960 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 EFCAB14O75071 495 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 LEFTY1O75610 366 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 ASLP04424 464 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 GLB1P16278 677 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 ECI1P42126 302 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 NEK4P51957 841 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 TTF1Q15361 905 aaPredicted RBP7.51□□□□□ -1.21
SDHB-205ENST00000475506 HSP90AB2PQ58FF8 381 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 KCNT2Q6UVM3 1135 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 SVOPQ8N4V2 548 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 TOP6BLQ8N6T0 577 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 TSR2Q969E8 191 aaKnown RBP7.51□□□□□ -1.21
SDHB-205ENST00000475506 Q96M66 194 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 ASPSCR1Q9BZE9 553 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 CYP26B1Q9NR63 512 aa7.51□□□□□ -1.21
SDHB-205ENST00000475506 SART1O43290 800 aaKnown RBP7.5□□□□□ -1.21
SDHB-205ENST00000475506 GAS2O43903 313 aaKnown RBP7.5□□□□□ -1.21
SDHB-205ENST00000475506 CRTAMO95727 393 aa7.5□□□□□ -1.21
SDHB-205ENST00000475506 JMJD7P0C870 316 aa7.5□□□□□ -1.21
SDHB-205ENST00000475506 KCNA6P17658 529 aa7.5□□□□□ -1.21
SDHB-205ENST00000475506 NOS3P29474 1203 aa7.5□□□□□ -1.21
SDHB-205ENST00000475506 DPY19L1Q2PZI1 675 aa7.5□□□□□ -1.21
SDHB-205ENST00000475506 ABHD17CQ6PCB6 329 aa7.5□□□□□ -1.21
SDHB-205ENST00000475506 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.5□□□□□ -1.21
SDHB-205ENST00000475506 FAM214BQ7L5A3 538 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms