RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 CTCFLQ8NI51 663 aaPredicted RBP11.66□□□□□ -0.54
COL8A1-206ENST00000474648 CCDC102AQ96A19 550 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 UBA5Q9GZZ9 404 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 CPVLQ9H3G5 476 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 RBM28Q9NW13 759 aaKnown RBP11.66□□□□□ -0.54
COL8A1-206ENST00000474648 DOCK1Q14185 1865 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 OTOFQ9HC10 1997 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 TMEM232C9JQI7 657 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 CYTH3O43739 400 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 PLA2G6O60733 806 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 IFNAR1P17181 557 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 SMARCA1P28370 1054 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 HOXA7P31268 230 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-206ENST00000474648 KIF5BP33176 963 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 SLC16A2P36021 539 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 GNAQP50148 359 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 GTF2A2P52657 109 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-206ENST00000474648 GPATCH4Q5T3I0 446 aaKnown RBP11.65□□□□□ -0.54
COL8A1-206ENST00000474648 CATSPERGQ6ZRH7 1159 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 FASTKD5Q7L8L6 764 aaKnown RBP11.65□□□□□ -0.54
COL8A1-206ENST00000474648 PROCA1Q8NCQ7 364 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-206ENST00000474648 BRI3BPQ8WY22 251 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 PTPN18Q99952 460 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 RPAP3Q9H6T3 665 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-206ENST00000474648 RIOX1Q9H6W3 641 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 TMOD4Q9NZQ9 345 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 TRPM7Q96QT4 1865 aa11.65□□□□□ -0.54
COL8A1-206ENST00000474648 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 USP17L15C9J2P7 530 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 USP17L13C9JLJ4 530 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 USP17L11C9JVI0 530 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 USP17L18D6R9N7 530 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 USP17L22D6RA61 530 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 USP17L17D6RBQ6 530 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 USP17L19D6RCP7 530 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 USP17L20D6RJB6 530 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 CETPP11597 493 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 FDPSP14324 419 aaKnown RBP11.64□□□□□ -0.55
COL8A1-206ENST00000474648 ANP32AP39687 249 aaKnown RBP11.64□□□□□ -0.55
COL8A1-206ENST00000474648 SLC4A3P48751 1232 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 HTRA3P83110 453 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 USP17L24Q0WX57 530 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 CCDC96Q2M329 555 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 DEFB115Q30KQ5 88 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 CYP4F22Q6NT55 531 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 GADL1Q6ZQY3 521 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
COL8A1-206ENST00000474648 CCDC82Q8N4S0 544 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 NSUN7Q8NE18 718 aaKnown RBP11.64□□□□□ -0.55
COL8A1-206ENST00000474648 SMARCC2Q8TAQ2 1214 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 ZIC5Q96T25 663 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 LZTS2Q9BRK4 669 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 JMJD4Q9H9V9 463 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 FBXO28Q9NVF7 368 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 FEM1BQ9UK73 627 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 PHIPQ8WWQ0 1821 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 MYH8P13535 1937 aa11.64□□□□□ -0.55
COL8A1-206ENST00000474648 CCL15-CCL14A0A0B4J2E2 113 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 DHX16O60231 1041 aaKnown RBP11.63□□□□□ -0.55
COL8A1-206ENST00000474648 JAK2O60674 1132 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 PPFIA3O75145 1194 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 BECN1Q14457 450 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 CCL15Q16663 113 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 SYDE2Q5VT97 1194 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 POTEEQ6S8J3 1075 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 ADGRF4Q8IZF3 695 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 CHURC1Q8WUH1 139 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 PHKBQ93100 1093 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 MTMR8Q96EF0 704 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 INTS4Q96HW7 963 aaKnown RBP11.63□□□□□ -0.55
COL8A1-206ENST00000474648 LLPHQ9BRT6 129 aaKnown RBP11.63□□□□□ -0.55
COL8A1-206ENST00000474648 SPZ1Q9BXG8 430 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 VAT1LQ9HCJ6 419 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 PRR12Q9ULL5 1215 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 AGTPBP1Q9UPW5 1226 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 V9GY48 417 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-206ENST00000474648 ATAD5Q96QE3 1844 aa11.63□□□□□ -0.55
COL8A1-206ENST00000474648 hCG_1642624A0A1W2PR95 340 aa11.62□□□□□ -0.55
COL8A1-206ENST00000474648 MANSC4A6NHS7 340 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-206ENST00000474648 BTBD19C9JJ37 291 aa11.62□□□□□ -0.55
COL8A1-206ENST00000474648 PRPF3O43395 683 aaKnown RBP11.62□□□□□ -0.55
COL8A1-206ENST00000474648 FMNL1O95466 1100 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-206ENST00000474648 C1QTNF8P60827 252 aa11.62□□□□□ -0.55
COL8A1-206ENST00000474648 KIF23Q02241 960 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-206ENST00000474648 COG2Q14746 738 aa11.62□□□□□ -0.55
COL8A1-206ENST00000474648 PKN1Q16512 942 aa11.62□□□□□ -0.55
COL8A1-206ENST00000474648 ANKRD23Q86SG2 305 aa11.62□□□□□ -0.55
COL8A1-206ENST00000474648 FAM160B2Q86V87 743 aa11.62□□□□□ -0.55
COL8A1-206ENST00000474648 P2RX7Q99572 595 aaKnown RBP11.62□□□□□ -0.55
COL8A1-206ENST00000474648 TANGO6Q9C0B7 1094 aa11.62□□□□□ -0.55
COL8A1-206ENST00000474648 PPP1R9AQ9ULJ8 1098 aa11.62□□□□□ -0.55
COL8A1-206ENST00000474648 ADAMTS5Q9UNA0 930 aa11.62□□□□□ -0.55
COL8A1-206ENST00000474648 CNTNAP5Q8WYK1 1306 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 PTPDC1A2A3K4 754 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 CPLX1O14810 134 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 AOC2O75106 756 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 FLOT1O75955 427 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 TM4SF4P48230 202 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms