RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SLBPQ14493 270 aaKnown RBP eCLIP5.9□□□□□ -1.46
BRCA1-212ENST00000473961 NKG7Q16617 165 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 FNDC3BQ53EP0 1204 aaKnown RBP5.9□□□□□ -1.46
BRCA1-212ENST00000473961 ANKRD39Q53RE8 183 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 DALRD3Q5D0E6 543 aaKnown RBP5.9□□□□□ -1.46
BRCA1-212ENST00000473961 CT47A1Q5JQC4 288 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-212ENST00000473961 TDRD10Q5VZ19 366 aaKnown RBP5.9□□□□□ -1.46
BRCA1-212ENST00000473961 ARMCX6Q7L4S7 300 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 KRT26Q7Z3Y9 468 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 SCUBE1Q8IWY4 988 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 LRRN4CLQ8ND94 238 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 GIMAP7Q8NHV1 300 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 BAHD1Q8TBE0 780 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-212ENST00000473961 CHAC2Q8WUX2 184 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 COX4I2Q96KJ9 171 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 DHRS4Q9BTZ2 278 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 ASPNQ9BXN1 380 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 JAG2Q9Y219 1238 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 CD2APQ9Y5K6 639 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 ACTL7BQ9Y614 415 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 DNAJC25-GNG10A0A024R161 153 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 TRBV23-1A0A0A0MS06 115 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 EPHX1P07099 455 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 NEFMP07197 916 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 VIL1P09327 827 aaKnown RBP5.89□□□□□ -1.47
BRCA1-212ENST00000473961 FOSL1P15407 271 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 CPEP16870 476 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 MAP7Q14244 749 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 PKN1Q16512 942 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 TKFCQ3LXA3 575 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 NBPF12Q5TAG4 269 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-212ENST00000473961 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-212ENST00000473961 PPFIBP1Q86W92 1011 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 CILP2Q8IUL8 1156 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 BVESQ8NE79 360 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 MFSD14AQ96MC6 490 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 CEP89Q96ST8 783 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 MRPL4Q9BYD3 311 aaKnown RBP5.89□□□□□ -1.47
BRCA1-212ENST00000473961 TYW1Q9NV66 732 aaKnown RBP5.89□□□□□ -1.47
BRCA1-212ENST00000473961 FAM86C1Q9NVL1 165 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 CEP131Q9UPN4 1083 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 PCDHB12Q9Y5F1 795 aa5.89□□□□□ -1.47
BRCA1-212ENST00000473961 A0A1W2PQU0 124 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 FGFR1P11362 822 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 BMP3P12645 472 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 DRD2P14416 443 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 RAB6AP20340 208 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 PPP2R2AP63151 447 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 NBPF9Q3BBW0 867 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 NOL9Q5SY16 702 aaKnown RBP5.88□□□□□ -1.47
BRCA1-212ENST00000473961 AXDND1Q5T1B0 1012 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-212ENST00000473961 C7orf61Q8IZ16 206 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 C2CD4AQ8NCU7 369 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-212ENST00000473961 XAGE3Q8WTP9 111 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 RNF141Q8WVD5 230 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 RCC1LQ96I51 464 aaKnown RBP5.88□□□□□ -1.47
BRCA1-212ENST00000473961 KLHL25Q9H0H3 589 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 NCOA5Q9HCD5 579 aaKnown RBP5.88□□□□□ -1.47
BRCA1-212ENST00000473961 FAM105AQ9NUU6 356 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 PRR13Q9NZ81 148 aa5.88□□□□□ -1.47
BRCA1-212ENST00000473961 MRPS23Q9Y3D9 190 aaKnown RBP5.88□□□□□ -1.47
BRCA1-212ENST00000473961 A0A087WZG4 1122 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 C9IYK1 514 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 EFCAB14O75071 495 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 F13BP05160 661 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 CD247P20963 164 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 PABPC4Q13310 644 aaKnown RBP eCLIP5.87□□□□□ -1.47
BRCA1-212ENST00000473961 AUHQ13825 339 aaKnown RBP5.87□□□□□ -1.47
BRCA1-212ENST00000473961 TM4SF20Q53R12 229 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 WWC2Q6AWC2 1192 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 LETMD1Q6P1Q0 360 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 ZNF227Q86WZ6 799 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 CCDC140Q96MF4 163 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 KREMEN1Q96MU8 473 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 MIPEPQ99797 713 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 ASCC2Q9H1I8 757 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-212ENST00000473961 KCNF1Q9H3M0 494 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 CAAP1Q9H8G2 361 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 PAK6Q9NQU5 681 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-212ENST00000473961 ARHGEF4Q9NR80 690 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 INTS7Q9NVH2 962 aaKnown RBP5.87□□□□□ -1.47
BRCA1-212ENST00000473961 MCM8Q9UJA3 840 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 FBXL21Q9UKT6 434 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 AKT3Q9Y243 479 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 DAGLAQ9Y4D2 1042 aa5.87□□□□□ -1.47
BRCA1-212ENST00000473961 CBFA2T2O43439 604 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 ITGAVP06756 1048 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 MYCLP1P12525 358 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-212ENST00000473961 DCAF15Q66K64 600 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 NSMFQ6X4W1 530 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 AHI1Q8N157 1196 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 PRPF38AQ8NAV1 312 aaKnown RBP5.86□□□□□ -1.47
BRCA1-212ENST00000473961 AGBL5Q8NDL9 886 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 KISS1RQ969F8 398 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-212ENST00000473961 FGD4Q96M96 766 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 PCGF6Q9BYE7 350 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 ACSS3Q9H6R3 686 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 GP6Q9HCN6 339 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 ATG3Q9NT62 314 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 MAGEC2Q9UBF1 373 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms