RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 NUCB1Q02818 461 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 LRMPQ12912 555 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 WLSQ5T9L3 541 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 NCAPG2Q86XI2 1143 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 DRC7Q8IY82 874 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 CNTNAP3BQ96NU0 1288 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 NOC4LQ9BVI4 516 aaKnown RBP5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 CNTNAP3Q9BZ76 1288 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 LIN7BQ9HAP6 207 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 SETBP1Q9Y6X0 1596 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 SRGAP3O43295 1099 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 PSAPP07602 524 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 CD33P20138 364 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 MCM2P49736 904 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 SLC8A3P57103 927 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 RCSD1Q6JBY9 416 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 CWC27Q6UX04 472 aaKnown RBP5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 NFXL1Q6ZNB6 911 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 DDX46Q7L014 1031 aaKnown RBP5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 PLA2G4DQ86XP0 818 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 ANKRD24Q8TF21 1146 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 ZNF837Q96EG3 531 aaPredicted RBP5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 COPRSQ9NQ92 184 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 ATXN7L1Q9ULK2 861 aaPredicted RBP5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 INPP5FQ9Y2H2 1132 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 CCDC141Q6ZP82 1450 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 ATXN2Q99700 1313 aaKnown RBP5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 CDC45O75419 566 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 GCKP35557 465 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 ZNF75DP51815 510 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 RARSP54136 660 aaKnown RBP5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 UBE2HP62256 183 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 MAP3K10Q02779 954 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 HYAL2Q12891 473 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 GNL2Q13823 731 aaKnown RBP5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 LAPTM4AQ15012 233 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 CDC37Q16543 378 aaPredicted RBP5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 FOXR1Q6PIV2 292 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 GPR161Q8N6U8 529 aaKnown RBP5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 ZKSCAN3Q9BRR0 538 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 CARD11Q9BXL7 1154 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 USP26Q9BXU7 913 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 TANGO6Q9C0B7 1094 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 RANBP17Q9H2T7 1088 aaKnown RBP5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 PRKAG2Q9UGJ0 569 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 TMEM131LA2VDJ0 1609 aa5.86□□□□□ -1.47
TMEM39A-206ENST00000473684 ERVK-7P63135 1459 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 TMEM238LA0A1B0GVL6 79 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 ITGA6P23229 1130 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 FCGRTP55899 365 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 PLAURQ03405 335 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 MYBPC2Q14324 1141 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 PLEKHO1Q53GL0 409 aaPredicted RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 DHX32Q7L7V1 743 aaKnown RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 IQCA1Q86XH1 822 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 CCAR2Q8N163 923 aaKnown RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 ZGPATQ8N5A5 531 aaKnown RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 CACTINQ8WUQ7 758 aaKnown RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 BHMTQ93088 406 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 KIFC2Q96AC6 838 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 OXCT2Q9BYC2 517 aaPredicted RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 FUT8Q9BYC5 575 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 MAF1Q9H063 256 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 SENP2Q9HC62 589 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 BATF3Q9NR55 127 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 TTF2Q9UNY4 1162 aaKnown RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 PIK3C2GO75747 1445 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 KDRP35968 1356 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 ERC2O15083 957 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 NPHP1O15259 732 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 TADA3O75528 432 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 SKILP12757 684 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 XRCC5P13010 732 aaKnown RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 ACPPP15309 386 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 DHX8Q14562 1220 aaKnown RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 FILIP1LQ4L180 1135 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 FAM182BQ5T319 152 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 RAB44Q7Z6P3 723 aaPredicted RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 CCNJLQ8IV13 435 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 AMOTL1Q8IY63 956 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 ZKSCAN4Q969J2 545 aaPredicted RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 INTS4Q96HW7 963 aaKnown RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 ZNF396Q96N95 335 aaPredicted RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 OSMRQ99650 979 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 PPM1HQ9ULR3 514 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 MYO6Q9UM54 1294 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 ROBO1Q9Y6N7 1651 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 QSER1Q2KHR3 1735 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 MAP2K7O14733 419 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 EPB41L2O43491 1005 aaKnown RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 KCNJ6P48051 423 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 RAB27AP51159 221 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 SNW1Q13573 536 aaKnown RBP5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 EFCAB2Q5VUJ9 269 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 LRRC8AQ8IWT6 810 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 SDR16C5Q8N3Y7 309 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 VPS18Q9P253 973 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 BLOC1S6Q9UL45 172 aa5.85□□□□□ -1.47
TMEM39A-206ENST00000473684 WDR33Q9C0J8 1336 aaKnown RBP5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 PIK3R4Q99570 1358 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms