RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TCP11X2Q5H9J9 407 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 TBC1D9BQ66K14 1250 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 WWC2Q6AWC2 1192 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 PTF1AQ7RTS3 328 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 TRIM10Q9UDY6 481 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 GTF2E1P29083 439 aaPredicted RBP23.79■■□□□ 1.4
COL18A1-207ENST00000473212 KRT9P35527 623 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 LMAN1P49257 510 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 SLC35G1Q2M3R5 365 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 FBXO33Q7Z6M2 555 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 CTAGE15A4D2H0 777 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 GTPBP6O43824 516 aaPredicted RBP23.78■■□□□ 1.4
COL18A1-207ENST00000473212 ERLIN1O75477 346 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 CTAGE8P0CG41 777 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 PRCPP42785 496 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 PFKFB3Q16875 520 aaPredicted RBP23.78■■□□□ 1.4
COL18A1-207ENST00000473212 CTAGE6Q86UF2 777 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 CTAGE4Q8IX94 777 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 LRRC15Q8TF66 581 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 EXOC4Q96A65 974 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 CHP1Q99653 195 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 CPVLQ9H3G5 476 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 L1RE1Q9UN81 338 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 CALM1P0DP23 149 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 CALM2P0DP24 149 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 CALM3P0DP25 149 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 VSNL1P62760 191 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 SF3B3Q15393 1217 aaKnown RBP23.78■■□□□ 1.4
COL18A1-207ENST00000473212 TMEM60Q9H2L4 133 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 TMEM51Q9NW97 253 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 SCN7AQ01118 1682 aa23.78■■□□□ 1.4
COL18A1-207ENST00000473212 CAPN2P17655 700 aa23.77■■□□□ 1.4
COL18A1-207ENST00000473212 SPAG1Q07617 926 aa23.77■■□□□ 1.4
COL18A1-207ENST00000473212 RAD51AP2Q09MP3 1159 aa23.77■■□□□ 1.4
COL18A1-207ENST00000473212 ZSCAN26Q16670 478 aa23.77■■□□□ 1.4
COL18A1-207ENST00000473212 C4orf32Q8N8J7 132 aa23.77■■□□□ 1.4
COL18A1-207ENST00000473212 ANKRD20A12PQ8NF67 263 aa23.77■■□□□ 1.4
COL18A1-207ENST00000473212 IL17RBQ9NRM6 502 aa23.77■■□□□ 1.4
COL18A1-207ENST00000473212 MCM9Q9NXL9 1143 aa23.77■■□□□ 1.4
COL18A1-207ENST00000473212 VPS18Q9P253 973 aa23.77■■□□□ 1.4
COL18A1-207ENST00000473212 LAMB2P55268 1798 aa23.77■■□□□ 1.4
COL18A1-207ENST00000473212 WHAMMP3Q1A5X7 153 aa23.77■■□□□ 1.4
COL18A1-207ENST00000473212 SRP68Q9UHB9 627 aaKnown RBP23.77■■□□□ 1.4
COL18A1-207ENST00000473212 SPATA31A1Q5TZJ5 1347 aa23.77■■□□□ 1.39
COL18A1-207ENST00000473212 DLEC1Q9Y238 1755 aa23.76■■□□□ 1.39
COL18A1-207ENST00000473212 N4BP1O75113 896 aaKnown RBP23.76■■□□□ 1.39
COL18A1-207ENST00000473212 RPN1P04843 607 aaKnown RBP23.76■■□□□ 1.39
COL18A1-207ENST00000473212 UBXN1Q04323 297 aa23.76■■□□□ 1.39
COL18A1-207ENST00000473212 MUM1L1Q5H9M0 696 aa23.76■■□□□ 1.39
COL18A1-207ENST00000473212 ZNF658Q5TYW1 1059 aaPredicted RBP23.76■■□□□ 1.39
COL18A1-207ENST00000473212 IRF2BP1Q8IU81 584 aa23.76■■□□□ 1.39
COL18A1-207ENST00000473212 CASZ1Q86V15 1759 aa23.76■■□□□ 1.39
COL18A1-207ENST00000473212 ORC4O43929 436 aa23.76■■□□□ 1.39
COL18A1-207ENST00000473212 PIP4K2BP78356 416 aa23.76■■□□□ 1.39
COL18A1-207ENST00000473212 NAALADL2Q58DX5 795 aa23.76■■□□□ 1.39
COL18A1-207ENST00000473212 NCAPH2Q6IBW4 605 aa23.76■■□□□ 1.39
COL18A1-207ENST00000473212 NOA1Q8NC60 698 aaKnown RBP23.76■■□□□ 1.39
COL18A1-207ENST00000473212 SLC44A5Q8NCS7 719 aa23.76■■□□□ 1.39
COL18A1-207ENST00000473212 USP17L3A6NCW0 530 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 USP17L4A6NCW7 530 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 TUBB4BP68371 445 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 TRIM14Q14142 442 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 USP17L1Q7RTZ2 530 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 MYO1AQ9UBC5 1043 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 TFAP4Q01664 338 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 GRIK5Q16478 980 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 CRNKL1Q9BZJ0 848 aaKnown RBP23.75■■□□□ 1.39
COL18A1-207ENST00000473212 PSD3Q9NYI0 1048 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 MYO6Q9UM54 1294 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 GUCA1BQ9UMX6 200 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 ZNF652Q9Y2D9 606 aa23.75■■□□□ 1.39
COL18A1-207ENST00000473212 REXO2Q9Y3B8 237 aaKnown RBP23.74■■□□□ 1.39
COL18A1-207ENST00000473212 HIBADHP31937 336 aaKnown RBP23.74■■□□□ 1.39
COL18A1-207ENST00000473212 AMPD2Q01433 879 aa23.74■■□□□ 1.39
COL18A1-207ENST00000473212 BLIDQ8IZY5 108 aa23.74■■□□□ 1.39
COL18A1-207ENST00000473212 EPN1Q9Y6I3 576 aaPredicted RBP23.74■■□□□ 1.39
COL18A1-207ENST00000473212 WNK3Q9BYP7 1800 aa23.73■■□□□ 1.39
COL18A1-207ENST00000473212 PES1O00541 588 aaKnown RBP23.73■■□□□ 1.39
COL18A1-207ENST00000473212 STAT6P42226 847 aa23.73■■□□□ 1.39
COL18A1-207ENST00000473212 RPS8P62241 208 aaKnown RBP23.73■■□□□ 1.39
COL18A1-207ENST00000473212 INF2Q27J81 1249 aa23.73■■□□□ 1.39
COL18A1-207ENST00000473212 RMND1Q9NWS8 449 aa23.73■■□□□ 1.39
COL18A1-207ENST00000473212 NKRFO15226 690 aaKnown RBP eCLIP23.73■■□□□ 1.39
COL18A1-207ENST00000473212 EIF3JO75822 258 aaKnown RBP23.73■■□□□ 1.39
COL18A1-207ENST00000473212 NDUFA10O95299 355 aa23.73■■□□□ 1.39
COL18A1-207ENST00000473212 PYM1Q9BRP8 204 aaKnown RBP23.73■■□□□ 1.39
COL18A1-207ENST00000473212 TTC26A0AVF1 554 aa23.72■■□□□ 1.39
COL18A1-207ENST00000473212 CYTH3O43739 400 aa23.72■■□□□ 1.39
COL18A1-207ENST00000473212 PARP1P09874 1014 aaKnown RBP23.72■■□□□ 1.39
COL18A1-207ENST00000473212 GOLGA8HP0CJ92 632 aa23.72■■□□□ 1.39
COL18A1-207ENST00000473212 TRAPPC10P48553 1259 aa23.72■■□□□ 1.39
COL18A1-207ENST00000473212 CASP8Q14790 479 aa23.72■■□□□ 1.39
COL18A1-207ENST00000473212 GPR101Q96P66 508 aaPredicted RBP23.72■■□□□ 1.39
COL18A1-207ENST00000473212 DIXDC1Q155Q3 683 aa23.72■■□□□ 1.39
COL18A1-207ENST00000473212 PNMA1Q8ND90 353 aa23.72■■□□□ 1.39
COL18A1-207ENST00000473212 FAN1Q9Y2M0 1017 aa23.72■■□□□ 1.39
COL18A1-207ENST00000473212 RASSF8Q8NHQ8 419 aa23.71■■□□□ 1.39
COL18A1-207ENST00000473212 KAT14Q9H8E8 782 aa23.71■■□□□ 1.39
COL18A1-207ENST00000473212 ENC1O14682 589 aa23.71■■□□□ 1.39
COL18A1-207ENST00000473212 AMIGO3Q86WK7 504 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms