RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 DNAJC2Q99543 621 aaKnown RBP7.64□□□□□ -1.19
HDAC1-205ENST00000472928 BOLA2Q9H3K6 86 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 UPF2Q9HAU5 1272 aaKnown RBP7.64□□□□□ -1.19
HDAC1-205ENST00000472928 TXNRD2Q9NNW7 524 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 SLC27A5Q9Y2P5 690 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 MYH2Q9UKX2 1941 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 CHD9Q3L8U1 2897 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 CDK5RAP2Q96SN8 1893 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 LTBP2Q14767 1821 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 MUC6Q6W4X9 2439 aa7.63□□□□□ -1.19
HDAC1-205ENST00000472928 ZKSCAN1P17029 563 aaPredicted RBP7.63□□□□□ -1.19
HDAC1-205ENST00000472928 SHHQ15465 462 aa7.63□□□□□ -1.19
HDAC1-205ENST00000472928 RETREG3Q86VR2 466 aa7.63□□□□□ -1.19
HDAC1-205ENST00000472928 USP38Q8NB14 1042 aa7.63□□□□□ -1.19
HDAC1-205ENST00000472928 ANKK1Q8NFD2 765 aa7.63□□□□□ -1.19
HDAC1-205ENST00000472928 SOCS4Q8WXH5 440 aa7.63□□□□□ -1.19
HDAC1-205ENST00000472928 LPIN2Q92539 896 aa7.63□□□□□ -1.19
HDAC1-205ENST00000472928 LBHD1Q9BQE6 289 aaPredicted RBP7.63□□□□□ -1.19
HDAC1-205ENST00000472928 NUDT12Q9BQG2 462 aa7.63□□□□□ -1.19
HDAC1-205ENST00000472928 FSD1Q9BTV5 496 aa7.63□□□□□ -1.19
HDAC1-205ENST00000472928 PRR14Q9BWN1 585 aa7.63□□□□□ -1.19
HDAC1-205ENST00000472928 FOSL2P15408 326 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 CHMLP26374 656 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 ANP32AP39687 249 aaKnown RBP7.62□□□□□ -1.19
HDAC1-205ENST00000472928 BTDP43251 543 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 PHKA1P46020 1223 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 RHBDL3P58872 404 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 RTP1P59025 263 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 SMAD3P84022 425 aaKnown RBP7.62□□□□□ -1.19
HDAC1-205ENST00000472928 PABPC4Q13310 644 aaKnown RBP eCLIP7.62□□□□□ -1.19
HDAC1-205ENST00000472928 PICALMQ13492 652 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 Q3C1V9 767 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 CCDC158Q5M9N0 1113 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 TRMT44Q8IYL2 757 aaKnown RBP7.62□□□□□ -1.19
HDAC1-205ENST00000472928 ZNF384Q8TF68 577 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 GLMNQ92990 594 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 EVI5LQ96CN4 794 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 EDC3Q96F86 508 aaKnown RBP7.62□□□□□ -1.19
HDAC1-205ENST00000472928 P2RX7Q99572 595 aaKnown RBP7.62□□□□□ -1.19
HDAC1-205ENST00000472928 HAUS7Q99871 368 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 SENP6Q9GZR1 1112 aaPredicted RBP7.62□□□□□ -1.19
HDAC1-205ENST00000472928 OSBPL5Q9H0X9 879 aaPredicted RBP7.62□□□□□ -1.19
HDAC1-205ENST00000472928 PORCNQ9H237 461 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 DIAPH3Q9NSV4 1193 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 RBPJLQ9UBG7 517 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 BAZ2AQ9UIF9 1905 aaKnown RBP7.62□□□□□ -1.19
HDAC1-205ENST00000472928 NAV1Q8NEY1 1877 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 FRMPD3Q5JV73 1810 aa7.62□□□□□ -1.19
HDAC1-205ENST00000472928 CHD7Q9P2D1 2997 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 SOWAHBA6NEL2 793 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 USP17L5A8MUK1 530 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 TNFRSF10AO00220 468 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 GOLIM4O00461 696 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 EIF5BO60841 1220 aaKnown RBP7.61□□□□□ -1.19
HDAC1-205ENST00000472928 ARID4AP29374 1257 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-205ENST00000472928 MAPK4P31152 587 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 HOXA7P31268 230 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-205ENST00000472928 PLA2G5P39877 138 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 CAP2P40123 477 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 RGS2P41220 211 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 HERVK_113P62684 666 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 IRX3P78415 501 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-205ENST00000472928 TJAP1Q5JTD0 557 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 GPR142Q7Z601 462 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 GPRC5AQ8NFJ5 357 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 EPS8L1Q8TE68 723 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.61□□□□□ -1.19
HDAC1-205ENST00000472928 UBE2Q2Q8WVN8 375 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 CALR3Q96L12 384 aaKnown RBP7.61□□□□□ -1.19
HDAC1-205ENST00000472928 TBC1D32Q96NH3 1257 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 APBA2Q99767 749 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 ESYT1Q9BSJ8 1104 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 WDR18Q9BV38 432 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.61□□□□□ -1.19
HDAC1-205ENST00000472928 PAG1Q9NWQ8 432 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 FLRT1Q9NZU1 646 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 DENND2AQ9ULE3 1009 aa7.61□□□□□ -1.19
HDAC1-205ENST00000472928 MROH7-TTC4A0A0A0MT08 1334 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 RAD50Q92878 1312 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 FOCADQ5VW36 1801 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 GPR75-ASB3A0A0A6YYF3 556 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 HIP1O00291 1037 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 REC8O95072 547 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 IGHA2P01877 340 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 UQCRFS1P1P0C7P4 283 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 MCAMP43121 646 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 BACE1P56817 501 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 ERVK-9P63128 1117 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 ERVK-24P63145 666 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 JAG1P78504 1218 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 RASGRF1Q13972 1273 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 SHROOM1Q2M3G4 852 aaPredicted RBP7.6□□□□□ -1.19
HDAC1-205ENST00000472928 CCDC102BQ68D86 513 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 DESI1Q6ICB0 168 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 PI16Q6UXB8 463 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 RNF19BQ6ZMZ0 732 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 PLEKHH3Q7Z736 793 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 TRPV1Q8NER1 839 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 BADQ92934 168 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 GNL3LQ9NVN8 582 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms