RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PNMA2Q9UL42 364 aa23.32■■□□□ 1.32
SF1-213ENST00000472725 ISY1Q9ULR0 285 aaKnown RBP23.32■■□□□ 1.32
SF1-213ENST00000472725 PALM3A6NDB9 673 aaPredicted RBP23.31■■□□□ 1.32
SF1-213ENST00000472725 ATP2A1O14983 1001 aa23.31■■□□□ 1.32
SF1-213ENST00000472725 ZBED4O75132 1171 aa23.31■■□□□ 1.32
SF1-213ENST00000472725 GNRH1P01148 92 aa23.31■■□□□ 1.32
SF1-213ENST00000472725 LBX1P52954 281 aa23.31■■□□□ 1.32
SF1-213ENST00000472725 EVCP57679 992 aa23.31■■□□□ 1.32
SF1-213ENST00000472725 ERVK-9P63128 1117 aa23.31■■□□□ 1.32
SF1-213ENST00000472725 ERVK-24P63145 666 aa23.31■■□□□ 1.32
SF1-213ENST00000472725 PPP2R5BQ15173 497 aa23.31■■□□□ 1.32
SF1-213ENST00000472725 GPHNQ9NQX3 736 aaPredicted RBP23.31■■□□□ 1.32
SF1-213ENST00000472725 PCNTO95613 3336 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 CPA1P15085 419 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 SMARCA1P28370 1054 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 COPB2P35606 906 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 GNAQP50148 359 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 LACTBP83111 547 aaPredicted RBP23.3■■□□□ 1.32
SF1-213ENST00000472725 SYDE2Q5VT97 1194 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 APOA5Q6Q788 366 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 CTCFLQ8NI51 663 aaPredicted RBP23.3■■□□□ 1.32
SF1-213ENST00000472725 KIFC2Q96AC6 838 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 TCEANC2Q96MN5 208 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 LZTS2Q9BRK4 669 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 SLC38A10Q9HBR0 1119 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 TXNRD2Q9NNW7 524 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 GPCPD1Q9NPB8 672 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 PDRG1Q9NUG6 133 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 PRR12Q9ULL5 1215 aa23.3■■□□□ 1.32
SF1-213ENST00000472725 CTDP1Q9Y5B0 961 aaPredicted RBP23.3■■□□□ 1.32
SF1-213ENST00000472725 COL11A1P12107 1806 aaPredicted RBP23.3■■□□□ 1.32
SF1-213ENST00000472725 FRMPD2Q68DX3 1309 aaPredicted RBP23.3■■□□□ 1.32
SF1-213ENST00000472725 CNMDO75829 334 aa23.29■■□□□ 1.32
SF1-213ENST00000472725 ANKRD1Q15327 319 aa23.29■■□□□ 1.32
SF1-213ENST00000472725 POTEEQ6S8J3 1075 aa23.29■■□□□ 1.32
SF1-213ENST00000472725 SHCBP1Q8NEM2 672 aa23.29■■□□□ 1.32
SF1-213ENST00000472725 REPS2Q8NFH8 660 aa23.29■■□□□ 1.32
SF1-213ENST00000472725 PAGR1Q9BTK6 254 aa23.29■■□□□ 1.32
SF1-213ENST00000472725 UPF3BQ9BZI7 483 aaKnown RBP23.29■■□□□ 1.32
SF1-213ENST00000472725 BTBD7Q9P203 1132 aa23.29■■□□□ 1.32
SF1-213ENST00000472725 MAD2L2Q9UI95 211 aa23.29■■□□□ 1.32
SF1-213ENST00000472725 SLC25A27O95847 323 aa23.28■■□□□ 1.32
SF1-213ENST00000472725 MAPK4P31152 587 aa23.28■■□□□ 1.32
SF1-213ENST00000472725 TTBK2Q6IQ55 1244 aa23.28■■□□□ 1.32
SF1-213ENST00000472725 RASGRP2Q7LDG7 609 aa23.28■■□□□ 1.32
SF1-213ENST00000472725 NUP133Q8WUM0 1156 aa23.28■■□□□ 1.32
SF1-213ENST00000472725 BRF1Q92994 677 aa23.28■■□□□ 1.32
SF1-213ENST00000472725 SPATC1LQ9H0A9 340 aa23.28■■□□□ 1.32
SF1-213ENST00000472725 MGAMO43451 1857 aa23.28■■□□□ 1.32
SF1-213ENST00000472725 KLRF2D3W0D1 207 aa23.27■■□□□ 1.32
SF1-213ENST00000472725 ZBTB43O43298 467 aa23.27■■□□□ 1.32
SF1-213ENST00000472725 TMEM132BQ14DG7 1078 aa23.27■■□□□ 1.32
SF1-213ENST00000472725 FANCBQ8NB91 859 aa23.27■■□□□ 1.32
SF1-213ENST00000472725 TBC1D32Q96NH3 1257 aa23.27■■□□□ 1.32
SF1-213ENST00000472725 TEX13BQ9BXU2 312 aa23.27■■□□□ 1.32
SF1-213ENST00000472725 RANBP17Q9H2T7 1088 aaKnown RBP23.27■■□□□ 1.32
SF1-213ENST00000472725 RBM28Q9NW13 759 aaKnown RBP23.27■■□□□ 1.32
SF1-213ENST00000472725 ZNF214Q9UL59 606 aaPredicted RBP23.27■■□□□ 1.32
SF1-213ENST00000472725 CASP8AP2Q9UKL3 1982 aa23.27■■□□□ 1.32
SF1-213ENST00000472725 KLF18A0A0U1RQI7 1052 aa23.26■■□□□ 1.31
SF1-213ENST00000472725 GOLGA8HP0CJ92 632 aa23.26■■□□□ 1.31
SF1-213ENST00000472725 STAT3P40763 770 aa23.26■■□□□ 1.31
SF1-213ENST00000472725 FCGRTP55899 365 aa23.26■■□□□ 1.31
SF1-213ENST00000472725 Q3C1V9 767 aa23.26■■□□□ 1.31
SF1-213ENST00000472725 SAMD1Q6SPF0 538 aaPredicted RBP23.26■■□□□ 1.31
SF1-213ENST00000472725 RIOX2Q8IUF8 465 aa23.26■■□□□ 1.31
SF1-213ENST00000472725 CCAR1Q8IX12 1150 aaKnown RBP23.26■■□□□ 1.31
SF1-213ENST00000472725 MROH8Q9H579 483 aa23.26■■□□□ 1.31
SF1-213ENST00000472725 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
SF1-213ENST00000472725 NID2Q14112 1375 aa23.26■■□□□ 1.31
SF1-213ENST00000472725 CCDC196A0A1B0GTZ2 297 aa23.25■■□□□ 1.31
SF1-213ENST00000472725 HOXD10P28358 340 aa23.25■■□□□ 1.31
SF1-213ENST00000472725 SLC16A2P36021 539 aa23.25■■□□□ 1.31
SF1-213ENST00000472725 TOB2Q14106 344 aaPredicted RBP23.25■■□□□ 1.31
SF1-213ENST00000472725 STAG2Q8N3U4 1231 aa23.25■■□□□ 1.31
SF1-213ENST00000472725 CHMP4CQ96CF2 233 aa23.25■■□□□ 1.31
SF1-213ENST00000472725 ZNF274Q96GC6 653 aaPredicted RBP23.25■■□□□ 1.31
SF1-213ENST00000472725 PSMC4P43686 418 aa23.24■■□□□ 1.31
SF1-213ENST00000472725 NEK4P51957 841 aa23.24■■□□□ 1.31
SF1-213ENST00000472725 PRMT2P55345 433 aa23.24■■□□□ 1.31
SF1-213ENST00000472725 APOBRQ0VD83 1088 aa23.24■■□□□ 1.31
SF1-213ENST00000472725 TKFCQ3LXA3 575 aa23.24■■□□□ 1.31
SF1-213ENST00000472725 MICU3Q86XE3 530 aa23.24■■□□□ 1.31
SF1-213ENST00000472725 CD99L2Q8TCZ2 262 aa23.24■■□□□ 1.31
SF1-213ENST00000472725 KIF2CQ99661 725 aa23.24■■□□□ 1.31
SF1-213ENST00000472725 MYL10Q9BUA6 226 aa23.24■■□□□ 1.31
SF1-213ENST00000472725 SPZ1Q9BXG8 430 aa23.24■■□□□ 1.31
SF1-213ENST00000472725 MOV10L1Q9BXT6 1211 aaKnown RBP23.24■■□□□ 1.31
SF1-213ENST00000472725 RIOX1Q9H6W3 641 aa23.24■■□□□ 1.31
SF1-213ENST00000472725 ICAM1P05362 532 aa23.23■■□□□ 1.31
SF1-213ENST00000472725 TRAF1Q13077 416 aa23.23■■□□□ 1.31
SF1-213ENST00000472725 PLS1Q14651 629 aa23.23■■□□□ 1.31
SF1-213ENST00000472725 RABEP1Q15276 862 aa23.23■■□□□ 1.31
SF1-213ENST00000472725 ADGRF4Q8IZF3 695 aa23.23■■□□□ 1.31
SF1-213ENST00000472725 COA7Q96BR5 231 aa23.23■■□□□ 1.31
SF1-213ENST00000472725 MTMR8Q96EF0 704 aa23.23■■□□□ 1.31
SF1-213ENST00000472725 UBA5Q9GZZ9 404 aa23.23■■□□□ 1.31
SF1-213ENST00000472725 TNPO2O14787 897 aaKnown RBP23.22■■□□□ 1.31
SF1-213ENST00000472725 STRNO43815 780 aa23.22■■□□□ 1.31
SF1-213ENST00000472725 FMNL1O95466 1100 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms