RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 SLC25A27O95847 323 aa17.67■□□□□ 0.42
SNX13-205ENST00000471744 OAZ1P54368 228 aa17.67■□□□□ 0.42
SNX13-205ENST00000471744 Q3C1V9 767 aa17.67■□□□□ 0.42
SNX13-205ENST00000471744 ADCK5Q3MIX3 580 aa17.67■□□□□ 0.42
SNX13-205ENST00000471744 COL13A1Q5TAT6 717 aaPredicted RBP17.67■□□□□ 0.42
SNX13-205ENST00000471744 POTEEQ6S8J3 1075 aa17.67■□□□□ 0.42
SNX13-205ENST00000471744 CATIPQ7Z7H3 387 aa17.67■□□□□ 0.42
SNX13-205ENST00000471744 TRIM47Q96LD4 638 aa17.67■□□□□ 0.42
SNX13-205ENST00000471744 ARHGAP39Q9C0H5 1083 aa17.67■□□□□ 0.42
SNX13-205ENST00000471744 SPATC1LQ9H0A9 340 aa17.67■□□□□ 0.42
SNX13-205ENST00000471744 CWC22Q9HCG8 908 aaKnown RBP17.67■□□□□ 0.42
SNX13-205ENST00000471744 MYH6P13533 1939 aa17.66■□□□□ 0.42
SNX13-205ENST00000471744 SH2B2O14492 632 aaPredicted RBP17.66■□□□□ 0.42
SNX13-205ENST00000471744 ATP2A1O14983 1001 aa17.66■□□□□ 0.42
SNX13-205ENST00000471744 PARP1P09874 1014 aaKnown RBP17.66■□□□□ 0.42
SNX13-205ENST00000471744 PLS1Q14651 629 aa17.66■□□□□ 0.42
SNX13-205ENST00000471744 FBXO46Q6PJ61 603 aaPredicted RBP17.66■□□□□ 0.42
SNX13-205ENST00000471744 BLOC1S2Q6QNY1 142 aa17.66■□□□□ 0.42
SNX13-205ENST00000471744 JAKMIP1Q96N16 626 aaKnown RBP17.66■□□□□ 0.42
SNX13-205ENST00000471744 LY9Q9HBG7 655 aa17.66■□□□□ 0.42
SNX13-205ENST00000471744 SLC38A10Q9HBR0 1119 aa17.66■□□□□ 0.42
SNX13-205ENST00000471744 SRRDQ9UH36 339 aa17.66■□□□□ 0.42
SNX13-205ENST00000471744 PNMA2Q9UL42 364 aa17.66■□□□□ 0.42
SNX13-205ENST00000471744 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 DDAH1O94760 285 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 CTGFP29279 349 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 STAT3P40763 770 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 ANAPC15P60006 121 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 EXOSC10Q01780 885 aaKnown RBP17.65■□□□□ 0.42
SNX13-205ENST00000471744 TMEM132BQ14DG7 1078 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 C8orf34Q49A92 452 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 SYDE2Q5VT97 1194 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 NFXL1Q6ZNB6 911 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 RIOX2Q8IUF8 465 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 REPS2Q8NFH8 660 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 SOCS4Q8WXH5 440 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 MAP3K14Q99558 947 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 MOV10L1Q9BXT6 1211 aaKnown RBP17.65■□□□□ 0.42
SNX13-205ENST00000471744 TEX13BQ9BXU2 312 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 TM6SF1Q9BZW5 370 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 MROH8Q9H579 483 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 GPCPD1Q9NPB8 672 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 ZNF214Q9UL59 606 aaPredicted RBP17.65■□□□□ 0.42
SNX13-205ENST00000471744 PRR12Q9ULL5 1215 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 PTPN22Q9Y2R2 807 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 IVNS1ABPQ9Y6Y0 642 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 FRMPD2Q68DX3 1309 aaPredicted RBP17.65■□□□□ 0.42
SNX13-205ENST00000471744 PLXNB2O15031 1838 aa17.65■□□□□ 0.42
SNX13-205ENST00000471744 ZNFX1Q9P2E3 1918 aaKnown RBP17.64■□□□□ 0.42
SNX13-205ENST00000471744 CALM1P0DP23 149 aa17.64■□□□□ 0.41
SNX13-205ENST00000471744 CALM2P0DP24 149 aa17.64■□□□□ 0.41
SNX13-205ENST00000471744 CALM3P0DP25 149 aa17.64■□□□□ 0.41
SNX13-205ENST00000471744 RASGRP2Q7LDG7 609 aa17.64■□□□□ 0.41
SNX13-205ENST00000471744 GPR142Q7Z601 462 aa17.64■□□□□ 0.41
SNX13-205ENST00000471744 PLEKHH3Q7Z736 793 aa17.64■□□□□ 0.41
SNX13-205ENST00000471744 SGMS1Q86VZ5 419 aa17.64■□□□□ 0.41
SNX13-205ENST00000471744 CHMP4CQ96CF2 233 aa17.64■□□□□ 0.41
SNX13-205ENST00000471744 MCOLN1Q9GZU1 580 aa17.64■□□□□ 0.41
SNX13-205ENST00000471744 PORCNQ9H237 461 aa17.64■□□□□ 0.41
SNX13-205ENST00000471744 STRNO43815 780 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 PEX10O60683 326 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 CASTP20810 708 aaKnown RBP17.63■□□□□ 0.41
SNX13-205ENST00000471744 FGD1P98174 961 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 CAP1Q01518 475 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 TROAPQ12815 778 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 GRM4Q14833 912 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 WDR78Q5VTH9 848 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 TTBK2Q6IQ55 1244 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 SYNE3Q6ZMZ3 975 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 ZNF654Q8IZM8 581 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 NUDT12Q9BQG2 462 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 SLC12A7Q9Y666 1083 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 BAZ2BQ9UIF8 2168 aaKnown RBP17.63■□□□□ 0.41
SNX13-205ENST00000471744 ZNF236Q9UL36 1845 aa17.63■□□□□ 0.41
SNX13-205ENST00000471744 SLC15A5A6NIM6 579 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 ECM2O94769 699 aaPredicted RBP17.62■□□□□ 0.41
SNX13-205ENST00000471744 ERCC3P19447 782 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 RPS6KB1P23443 525 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 KIF5BP33176 963 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 SLC16A2P36021 539 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 IRF5Q13568 498 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 TKFCQ3LXA3 575 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 SNRNP48Q6IEG0 339 aaKnown RBP17.62■□□□□ 0.41
SNX13-205ENST00000471744 NCAPG2Q86XI2 1143 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 TNS4Q8IZW8 715 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 ABRAQ8N0Z2 381 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 CPXCR1Q8N123 301 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 FBXL16Q8N461 479 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 CTCFLQ8NI51 663 aaPredicted RBP17.62■□□□□ 0.41
SNX13-205ENST00000471744 RAET1EQ8TD07 263 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 RANBP17Q9H2T7 1088 aaKnown RBP17.62■□□□□ 0.41
SNX13-205ENST00000471744 SENP2Q9HC62 589 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 FBXO40Q9UH90 709 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 CYP46A1Q9Y6A2 500 aa17.62■□□□□ 0.41
SNX13-205ENST00000471744 PALM3A6NDB9 673 aaPredicted RBP17.61■□□□□ 0.41
SNX13-205ENST00000471744 KLRF2D3W0D1 207 aa17.61■□□□□ 0.41
SNX13-205ENST00000471744 GOLGA8HP0CJ92 632 aa17.61■□□□□ 0.41
SNX13-205ENST00000471744 PTPREP23469 700 aa17.61■□□□□ 0.41
SNX13-205ENST00000471744 GNAQP50148 359 aa17.61■□□□□ 0.41
SNX13-205ENST00000471744 RCAN1P53805 252 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms