RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	NDUFB10	O96000	172 aa		29.78	■■■□□ 2.36
U2AF1-208	ENST00000471250	LRSAM1	Q6UWE0	723 aa		29.78	■■■□□ 2.36
U2AF1-208	ENST00000471250	APOBEC3F	Q8IUX4	373 aa	Known RBP	29.78	■■■□□ 2.36
U2AF1-208	ENST00000471250	MTMR8	Q96EF0	704 aa		29.78	■■■□□ 2.36
U2AF1-208	ENST00000471250	ZMYND12	Q9H0C1	365 aa		29.78	■■■□□ 2.36
U2AF1-208	ENST00000471250	DDX19A	Q9NUU7	478 aa	Known RBP	29.78	■■■□□ 2.36
U2AF1-208	ENST00000471250	DACT1	Q9NYF0	836 aa		29.78	■■■□□ 2.36
U2AF1-208	ENST00000471250	PHF20L1	A8MW92	1017 aa		29.77	■■■□□ 2.36
U2AF1-208	ENST00000471250	ADAMTS3	O15072	1205 aa		29.77	■■■□□ 2.36
U2AF1-208	ENST00000471250	EPS15	P42566	896 aa		29.77	■■■□□ 2.36
U2AF1-208	ENST00000471250	NAPA	P54920	295 aa		29.77	■■■□□ 2.36
U2AF1-208	ENST00000471250	AXDND1	Q5T1B0	1012 aa	Predicted RBP	29.77	■■■□□ 2.36
U2AF1-208	ENST00000471250	PCDHB6	Q9Y5E3	794 aa		29.77	■■■□□ 2.36
U2AF1-208	ENST00000471250	PNMA6F	A0A0J9YX94	578 aa		29.76	■■■□□ 2.36
U2AF1-208	ENST00000471250	RAD21	O60216	631 aa		29.76	■■■□□ 2.36
U2AF1-208	ENST00000471250	GOLPH3L	Q9H4A5	285 aa		29.76	■■■□□ 2.36
U2AF1-208	ENST00000471250	CEP131	Q9UPN4	1083 aa		29.76	■■■□□ 2.36
U2AF1-208	ENST00000471250	TMX2	Q9Y320	296 aa		29.76	■■■□□ 2.36
U2AF1-208	ENST00000471250	NR1I2	O75469	434 aa		29.76	■■■□□ 2.35
U2AF1-208	ENST00000471250	MARCKS	P29966	332 aa	Predicted RBP	29.76	■■■□□ 2.35
U2AF1-208	ENST00000471250	SLC16A2	P36021	539 aa		29.76	■■■□□ 2.35
U2AF1-208	ENST00000471250	NOM1	Q5C9Z4	860 aa	Known RBP	29.76	■■■□□ 2.35
U2AF1-208	ENST00000471250	ANGEL2	Q5VTE6	544 aa	Known RBP	29.76	■■■□□ 2.35
U2AF1-208	ENST00000471250	MRPS27	Q92552	414 aa	Known RBP	29.76	■■■□□ 2.35
U2AF1-208	ENST00000471250	MORC2	Q9Y6X9	1032 aa	Predicted RBP	29.76	■■■□□ 2.35
U2AF1-208	ENST00000471250	ATAD5	Q96QE3	1844 aa		29.75	■■■□□ 2.35
U2AF1-208	ENST00000471250	ESYT2	A0FGR8	921 aa		29.75	■■■□□ 2.35
U2AF1-208	ENST00000471250	DDN	O94850	711 aa	Predicted RBP	29.75	■■■□□ 2.35
U2AF1-208	ENST00000471250	CCDC73	Q6ZRK6	1079 aa		29.75	■■■□□ 2.35
U2AF1-208	ENST00000471250	FSIP1	Q8NA03	581 aa		29.75	■■■□□ 2.35
U2AF1-208	ENST00000471250	TRIM75P	A6NK02	468 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	USP17L10	C9JJH3	530 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	ASNS	P08243	561 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	ECE1	P42892	770 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	TRAPPC10	P48553	1259 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	C9orf131	Q5VYM1	1079 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	PIK3AP1	Q6ZUJ8	805 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	ACER1	Q8TDN7	264 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	C6orf50	Q9HD87	102 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	GINM1	Q9NU53	330 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	PCDHA6	Q9UN73	950 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	PCDHA8	Q9Y5H6	950 aa		29.74	■■■□□ 2.35
U2AF1-208	ENST00000471250	SMCO2	A6NFE2	343 aa		29.73	■■■□□ 2.35
U2AF1-208	ENST00000471250	BMP3	P12645	472 aa		29.73	■■■□□ 2.35
U2AF1-208	ENST00000471250	ATP2B1	P20020	1258 aa		29.73	■■■□□ 2.35
U2AF1-208	ENST00000471250	GNA11	P29992	359 aa		29.73	■■■□□ 2.35
U2AF1-208	ENST00000471250	HIRA	P54198	1017 aa	Predicted RBP	29.73	■■■□□ 2.35
U2AF1-208	ENST00000471250	L1TD1	Q5T7N2	865 aa	Known RBP	29.73	■■■□□ 2.35
U2AF1-208	ENST00000471250	ENGASE	Q8NFI3	743 aa		29.73	■■■□□ 2.35
U2AF1-208	ENST00000471250	NUP62CL	Q9H1M0	184 aa		29.73	■■■□□ 2.35
U2AF1-208	ENST00000471250	ZBTB5	O15062	677 aa		29.72	■■■□□ 2.35
U2AF1-208	ENST00000471250	CUTA	O60888	179 aa		29.72	■■■□□ 2.35
U2AF1-208	ENST00000471250	CMA1	P23946	247 aa		29.72	■■■□□ 2.35
U2AF1-208	ENST00000471250	NBPF12	Q5TAG4	269 aa	Predicted RBP	29.72	■■■□□ 2.35
U2AF1-208	ENST00000471250	CLSTN2	Q9H4D0	955 aa		29.72	■■■□□ 2.35
U2AF1-208	ENST00000471250	FAM160A1	Q05DH4	1040 aa		29.72	■■■□□ 2.35
U2AF1-208	ENST00000471250	SNW1	Q13573	536 aa	Known RBP	29.72	■■■□□ 2.35
U2AF1-208	ENST00000471250	PPP1R18	Q6NYC8	613 aa		29.72	■■■□□ 2.35
U2AF1-208	ENST00000471250	GOPC	Q9HD26	462 aa		29.72	■■■□□ 2.35
U2AF1-208	ENST00000471250	BMP15	O95972	392 aa		29.71	■■■□□ 2.35
U2AF1-208	ENST00000471250	TTC38	Q5R3I4	469 aa		29.71	■■■□□ 2.35
U2AF1-208	ENST00000471250	BTNL9	Q6UXG8	535 aa		29.71	■■■□□ 2.35
U2AF1-208	ENST00000471250	COA7	Q96BR5	231 aa		29.71	■■■□□ 2.35
U2AF1-208	ENST00000471250	HOOK2	Q96ED9	719 aa		29.71	■■■□□ 2.35
U2AF1-208	ENST00000471250	NUP88	Q99567	741 aa	Predicted RBP	29.71	■■■□□ 2.35
U2AF1-208	ENST00000471250	SH2D4A	Q9H788	454 aa		29.71	■■■□□ 2.35
U2AF1-208	ENST00000471250	PPP2R3B	Q9Y5P8	575 aa		29.71	■■■□□ 2.35
U2AF1-208	ENST00000471250	LMOD1	P29536	600 aa	Predicted RBP	29.7	■■■□□ 2.35
U2AF1-208	ENST00000471250	DCAF15	Q66K64	600 aa		29.7	■■■□□ 2.35
U2AF1-208	ENST00000471250	KRI1	Q8N9T8	703 aa	Known RBP	29.7	■■■□□ 2.35
U2AF1-208	ENST00000471250	RASGRP4	Q8TDF6	673 aa		29.7	■■■□□ 2.35
U2AF1-208	ENST00000471250	GGA3	Q9NZ52	723 aa		29.7	■■■□□ 2.35
U2AF1-208	ENST00000471250	CTNND1	O60716	968 aa	Known RBP	29.69	■■■□□ 2.34
U2AF1-208	ENST00000471250	PPP1R11	O60927	126 aa	Predicted RBP	29.69	■■■□□ 2.34
U2AF1-208	ENST00000471250	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	29.69	■■■□□ 2.34
U2AF1-208	ENST00000471250	CCDC194	A0A1B0GVG4	234 aa		29.69	■■■□□ 2.34
U2AF1-208	ENST00000471250	PTPRE	P23469	700 aa		29.69	■■■□□ 2.34
U2AF1-208	ENST00000471250	MRE11	P49959	708 aa		29.69	■■■□□ 2.34
U2AF1-208	ENST00000471250	FMR1NB	Q8N0W7	255 aa	Predicted RBP	29.69	■■■□□ 2.34
U2AF1-208	ENST00000471250	VCPKMT	Q9H867	229 aa		29.69	■■■□□ 2.34
U2AF1-208	ENST00000471250	ADARB2	Q9NS39	739 aa	Known RBP	29.69	■■■□□ 2.34
U2AF1-208	ENST00000471250	FBXO2	Q9UK22	296 aa	Predicted RBP	29.69	■■■□□ 2.34
U2AF1-208	ENST00000471250		A0A1B0GVL5	298 aa		29.68	■■■□□ 2.34
U2AF1-208	ENST00000471250	TMEM232	C9JQI7	657 aa		29.68	■■■□□ 2.34
U2AF1-208	ENST00000471250	WNT7A	O00755	349 aa		29.68	■■■□□ 2.34
U2AF1-208	ENST00000471250	KIAA1755	Q5JYT7	1200 aa		29.68	■■■□□ 2.34
U2AF1-208	ENST00000471250	SYDE2	Q5VT97	1194 aa		29.68	■■■□□ 2.34
U2AF1-208	ENST00000471250	ZNF341	Q9BYN7	854 aa		29.68	■■■□□ 2.34
U2AF1-208	ENST00000471250	TNMD	Q9H2S6	317 aa		29.68	■■■□□ 2.34
U2AF1-208	ENST00000471250	GRPEL1	Q9HAV7	217 aa		29.68	■■■□□ 2.34
U2AF1-208	ENST00000471250	PITPNM2	Q9BZ72	1349 aa		29.67	■■■□□ 2.34
U2AF1-208	ENST00000471250	NDUFA8	P51970	172 aa		29.67	■■■□□ 2.34
U2AF1-208	ENST00000471250	QRICH1	Q2TAL8	776 aa		29.67	■■■□□ 2.34
U2AF1-208	ENST00000471250	SHC4	Q6S5L8	630 aa		29.67	■■■□□ 2.34
U2AF1-208	ENST00000471250	KRT25	Q7Z3Z0	450 aa		29.67	■■■□□ 2.34
U2AF1-208	ENST00000471250	CLIC6	Q96NY7	704 aa		29.67	■■■□□ 2.34
U2AF1-208	ENST00000471250	SRPRB	Q9Y5M8	271 aa	Known RBP	29.67	■■■□□ 2.34
U2AF1-208	ENST00000471250	FAM237A	A0A1B0GTK4	181 aa		29.66	■■■□□ 2.34
U2AF1-208	ENST00000471250	ADCY7	P51828	1080 aa		29.66	■■■□□ 2.34
U2AF1-208	ENST00000471250	ZNF174	Q15697	407 aa		29.66	■■■□□ 2.34

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms