RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 RTP2Q5QGT7 225 aa8.41□□□□□ -1.06
PRPF40A-206ENST00000471167 CRTC3Q6UUV7 619 aa8.41□□□□□ -1.06
PRPF40A-206ENST00000471167 KLHL6Q8WZ60 621 aa8.41□□□□□ -1.06
PRPF40A-206ENST00000471167 MAP6Q96JE9 813 aa8.41□□□□□ -1.06
PRPF40A-206ENST00000471167 GP6Q9HCN6 339 aa8.41□□□□□ -1.06
PRPF40A-206ENST00000471167 PRR13Q9NZ81 148 aa8.41□□□□□ -1.06
PRPF40A-206ENST00000471167 FITM1A5D6W6 292 aa8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 USP2O75604 605 aaPredicted RBP8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 FARP2O94887 1054 aaPredicted RBP8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 BMP8BP34820 402 aa8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 PCBP3P57721 371 aaKnown RBP8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 NLRX1Q86UT6 975 aa8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 CCDC144CPQ8IYA2 1237 aa8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 DHX38Q92620 1227 aaKnown RBP8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 BRF1Q92994 677 aa8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 SPATA32Q96LK8 384 aa8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 DIRC2Q96SL1 478 aa8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 IGSF5Q9NSI5 407 aa8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 FAM53CQ9NYF3 392 aa8.4□□□□□ -1.06
PRPF40A-206ENST00000471167 RAC2P15153 192 aa8.39□□□□□ -1.07
PRPF40A-206ENST00000471167 ATF4P18848 351 aaPredicted RBP8.39□□□□□ -1.07
PRPF40A-206ENST00000471167 CD247P20963 164 aa8.39□□□□□ -1.07
PRPF40A-206ENST00000471167 C19orf47Q8N9M1 422 aaKnown RBP8.39□□□□□ -1.07
PRPF40A-206ENST00000471167 SEC16BQ96JE7 1060 aa8.39□□□□□ -1.07
PRPF40A-206ENST00000471167 PLCD4Q9BRC7 762 aa8.39□□□□□ -1.07
PRPF40A-206ENST00000471167 SLC12A9Q9BXP2 914 aa8.39□□□□□ -1.07
PRPF40A-206ENST00000471167 ERVK13-1Q9NX77 482 aa8.39□□□□□ -1.07
PRPF40A-206ENST00000471167 SUSD2Q9UGT4 822 aa8.39□□□□□ -1.07
PRPF40A-206ENST00000471167 YBX2Q9Y2T7 364 aaKnown RBP8.39□□□□□ -1.07
PRPF40A-206ENST00000471167 FADS2P1A8MWK0 482 aa8.38□□□□□ -1.07
PRPF40A-206ENST00000471167 H0Y8X5 98 aa8.38□□□□□ -1.07
PRPF40A-206ENST00000471167 MPZL3Q6UWV2 235 aa8.38□□□□□ -1.07
PRPF40A-206ENST00000471167 LILRA2Q8N149 483 aa8.38□□□□□ -1.07
PRPF40A-206ENST00000471167 OXR1Q8N573 874 aa8.38□□□□□ -1.07
PRPF40A-206ENST00000471167 ZNF513Q8N8E2 541 aaPredicted RBP8.38□□□□□ -1.07
PRPF40A-206ENST00000471167 ANKS4BQ8N8V4 417 aa8.38□□□□□ -1.07
PRPF40A-206ENST00000471167 NSUN3Q9H649 340 aaKnown RBP8.38□□□□□ -1.07
PRPF40A-206ENST00000471167 AP5S1Q9NUS5 200 aa8.38□□□□□ -1.07
PRPF40A-206ENST00000471167 INPP5FQ9Y2H2 1132 aa8.38□□□□□ -1.07
PRPF40A-206ENST00000471167 YBX3P16989 372 aaKnown RBP eCLIP8.37□□□□□ -1.07
PRPF40A-206ENST00000471167 CASP7P55210 303 aa8.37□□□□□ -1.07
PRPF40A-206ENST00000471167 JAG1P78504 1218 aa8.37□□□□□ -1.07
PRPF40A-206ENST00000471167 FAM84AQ96KN4 292 aa8.37□□□□□ -1.07
PRPF40A-206ENST00000471167 MCMBPQ9BTE3 642 aa8.37□□□□□ -1.07
PRPF40A-206ENST00000471167 KLHL25Q9H0H3 589 aa8.37□□□□□ -1.07
PRPF40A-206ENST00000471167 NRDCO43847 1150 aa8.36□□□□□ -1.07
PRPF40A-206ENST00000471167 TCF3P15923 654 aa8.36□□□□□ -1.07
PRPF40A-206ENST00000471167 CHRNEQ04844 493 aa8.36□□□□□ -1.07
PRPF40A-206ENST00000471167 DUSP4Q13115 394 aa8.36□□□□□ -1.07
PRPF40A-206ENST00000471167 SPPL2CQ8IUH8 684 aa8.36□□□□□ -1.07
PRPF40A-206ENST00000471167 SMARCC1Q92922 1105 aaPredicted RBP8.36□□□□□ -1.07
PRPF40A-206ENST00000471167 CRBNQ96SW2 442 aa8.36□□□□□ -1.07
PRPF40A-206ENST00000471167 ZMYM5Q9UJ78 669 aa8.36□□□□□ -1.07
PRPF40A-206ENST00000471167 FHOD1Q9Y613 1164 aa8.36□□□□□ -1.07
PRPF40A-206ENST00000471167 ERCC5P28715 1186 aaPredicted RBP8.35□□□□□ -1.07
PRPF40A-206ENST00000471167 KIR2DL1P43626 348 aaPredicted RBP8.35□□□□□ -1.07
PRPF40A-206ENST00000471167 KIR2DL2P43627 348 aaPredicted RBP8.35□□□□□ -1.07
PRPF40A-206ENST00000471167 SLCO6A1Q86UG4 719 aa8.35□□□□□ -1.07
PRPF40A-206ENST00000471167 SIRT2Q8IXJ6 389 aa8.35□□□□□ -1.07
PRPF40A-206ENST00000471167 HAUS7Q99871 368 aa8.35□□□□□ -1.07
PRPF40A-206ENST00000471167 CCSER2Q9H7U1 834 aa8.35□□□□□ -1.07
PRPF40A-206ENST00000471167 GPR160Q9UJ42 338 aa8.35□□□□□ -1.07
PRPF40A-206ENST00000471167 ARID1BQ8NFD5 2236 aaPredicted RBP8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 MYOCOSA0A1B0GUC4 107 aa8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 GSNP06396 782 aa8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 GNPTABQ3T906 1256 aa8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 CEP128Q6ZU80 1094 aa8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 SYDE1Q6ZW31 735 aaPredicted RBP8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 FIBCD1Q8N539 461 aa8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 OR6P1Q8NGX9 317 aa8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 INTS4Q96HW7 963 aaKnown RBP8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 FCRL2Q96LA5 508 aaPredicted RBP8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 FCRL3Q96P31 734 aaPredicted RBP8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 TINF2Q9BSI4 451 aa8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 GPR55Q9Y2T6 319 aaPredicted RBP8.34□□□□□ -1.07
PRPF40A-206ENST00000471167 EPHX1P07099 455 aa8.33□□□□□ -1.08
PRPF40A-206ENST00000471167 C1QTNF9P0C862 333 aa8.33□□□□□ -1.08
PRPF40A-206ENST00000471167 SDHBP21912 280 aa8.33□□□□□ -1.08
PRPF40A-206ENST00000471167 SNX17Q15036 470 aa8.33□□□□□ -1.08
PRPF40A-206ENST00000471167 HSF5Q4G112 596 aaPredicted RBP8.33□□□□□ -1.08
PRPF40A-206ENST00000471167 CWC22Q9HCG8 908 aaKnown RBP8.33□□□□□ -1.08
PRPF40A-206ENST00000471167 SSU72P8A0A1W2PR75 194 aa8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 IFNGR1P15260 489 aa8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 RTP1P59025 263 aa8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 KSR1Q8IVT5 923 aa8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 JMJD8Q96S16 334 aa8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 DSCC1Q9BVC3 393 aa8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 CDADC1Q9BWV3 514 aa8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 MCOLN1Q9GZU1 580 aa8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 NOL6Q9H6R4 1146 aaKnown RBP8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 PHAXQ9H814 394 aaKnown RBP8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 DCP1AQ9NPI6 582 aaPredicted RBP8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 TNFRSF10DQ9UBN6 386 aa8.32□□□□□ -1.08
PRPF40A-206ENST00000471167 A0A087WZG4 1122 aa8.31□□□□□ -1.08
PRPF40A-206ENST00000471167 RBM25P49756 843 aaKnown RBP8.31□□□□□ -1.08
PRPF40A-206ENST00000471167 SLC7A5Q01650 507 aa8.31□□□□□ -1.08
PRPF40A-206ENST00000471167 PPP2R5EQ16537 467 aa8.31□□□□□ -1.08
PRPF40A-206ENST00000471167 IRF2BP1Q8IU81 584 aa8.31□□□□□ -1.08
PRPF40A-206ENST00000471167 FBXO15Q8NCQ5 510 aaPredicted RBP8.31□□□□□ -1.08
PRPF40A-206ENST00000471167 BHLHE22Q8NFJ8 381 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms