RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 COX20Q5RI15 118 aa5.73□□□□□ -1.49
SF3B1-208ENST00000470268 SOGA3Q5TF21 947 aa5.73□□□□□ -1.49
SF3B1-208ENST00000470268 SPATA5Q8NB90 893 aa5.73□□□□□ -1.49
SF3B1-208ENST00000470268 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.73□□□□□ -1.49
SF3B1-208ENST00000470268 DNAJC2Q99543 621 aaKnown RBP5.73□□□□□ -1.49
SF3B1-208ENST00000470268 ZC3H12CQ9C0D7 883 aaKnown RBP5.73□□□□□ -1.49
SF3B1-208ENST00000470268 NUCKS1Q9H1E3 243 aaKnown RBP5.73□□□□□ -1.49
SF3B1-208ENST00000470268 ANO2Q9NQ90 1003 aa5.73□□□□□ -1.49
SF3B1-208ENST00000470268 ARAP2Q8WZ64 1704 aa5.73□□□□□ -1.49
SF3B1-208ENST00000470268 GOLIM4O00461 696 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 PPIP5K2O43314 1243 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 UQCRFS1P1P0C7P4 283 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 ARHGAP4P98171 946 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 GRIK5Q16478 980 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 C1orf53Q5VUE5 145 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 VPS37DQ86XT2 251 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 GPATCH3Q96I76 525 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 EYA3Q99504 573 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 COA1Q9GZY4 146 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 SAP130Q9H0E3 1048 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 TAOK3Q9H2K8 898 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 TIMMDC1Q9NPL8 285 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 PIH1D3Q9NQM4 214 aaKnown RBP5.72□□□□□ -1.49
SF3B1-208ENST00000470268 BIN2Q9UBW5 565 aaPredicted RBP5.72□□□□□ -1.49
SF3B1-208ENST00000470268 MKL2Q9ULH7 1088 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 ZNF232Q9UNY5 417 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 PIK3R2O00459 728 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 ECE2O60344 883 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 IARSP41252 1262 aaKnown RBP5.72□□□□□ -1.49
SF3B1-208ENST00000470268 CHAF1AQ13111 956 aaPredicted RBP5.72□□□□□ -1.49
SF3B1-208ENST00000470268 MTMR3Q13615 1198 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 LBRQ14739 615 aaKnown RBP5.72□□□□□ -1.49
SF3B1-208ENST00000470268 RTN1Q16799 776 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 ARHGAP27Q6ZUM4 889 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 ZNF804AQ7Z570 1209 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 ZNF384Q8TF68 577 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 RILPL2Q969X0 211 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 MXD3Q9BW11 206 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 OXCT2Q9BYC2 517 aaPredicted RBP5.72□□□□□ -1.49
SF3B1-208ENST00000470268 IL25Q9H293 177 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 PAG1Q9NWQ8 432 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 STIM2Q9P246 746 aa5.72□□□□□ -1.49
SF3B1-208ENST00000470268 LTBP3Q9NS15 1303 aa5.71□□□□□ -1.49
SF3B1-208ENST00000470268 FRAT2O75474 233 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-208ENST00000470268 PRDX5P30044 214 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 C8orf34Q49A92 452 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 C4orf17Q53FE4 359 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 SH3PXD2AQ5TCZ1 1133 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 DNAJC14Q6Y2X3 702 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-208ENST00000470268 ALDH16A1Q8IZ83 802 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 CERS5Q8N5B7 392 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 KBTBD3Q8NAB2 608 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 SUPT20HQ8NEM7 779 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 EVI5LQ96CN4 794 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 GNL3LQ9NVN8 582 aaKnown RBP5.71□□□□□ -1.5
SF3B1-208ENST00000470268 GDF2Q9UK05 429 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-208ENST00000470268 DENND2AQ9ULE3 1009 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 LRFN2Q9ULH4 789 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 FER1L6Q2WGJ9 1857 aa5.71□□□□□ -1.5
SF3B1-208ENST00000470268 TNFRSF10BO14763 440 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 TTLL5Q6EMB2 1281 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 CNTROBQ8N137 903 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 ZDHHC3Q9NYG2 299 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 ABCF2Q9UG63 623 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 PDS5AQ29RF7 1337 aaKnown RBP5.7□□□□□ -1.5
SF3B1-208ENST00000470268 FAM205AQ6ZU69 1335 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 ARFGEF1Q9Y6D6 1849 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 AKAP11Q9UKA4 1901 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 IDH1O75874 414 aaKnown RBP5.7□□□□□ -1.5
SF3B1-208ENST00000470268 RAD17O75943 681 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 CHMLP26374 656 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 CXCL9Q07325 125 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 GPR162Q16538 588 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 MFSD14BQ5SR56 506 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 DACT2Q5SW24 774 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 ALKBH2Q6NS38 261 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 ADGRA1Q86SQ6 560 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 FAM227BQ96M60 508 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 SEC62Q99442 399 aaKnown RBP5.7□□□□□ -1.5
SF3B1-208ENST00000470268 FSD1Q9BTV5 496 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 BACH2Q9BYV9 841 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 PHACTR1Q9C0D0 580 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 VPS33BQ9H267 617 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 HCN4Q9Y3Q4 1203 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 GPC6Q9Y625 555 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-208ENST00000470268 SALL1Q9NSC2 1324 aa5.7□□□□□ -1.5
SF3B1-208ENST00000470268 A0A0D9SFI3 127 aa5.69□□□□□ -1.5
SF3B1-208ENST00000470268 TCRBV5S4A2TA0A5A2 114 aa5.69□□□□□ -1.5
SF3B1-208ENST00000470268 FZD9O00144 591 aa5.69□□□□□ -1.5
SF3B1-208ENST00000470268 PSMD14O00487 310 aa5.69□□□□□ -1.5
SF3B1-208ENST00000470268 MPSTP25325 297 aa5.69□□□□□ -1.5
SF3B1-208ENST00000470268 BRD2P25440 801 aaKnown RBP5.69□□□□□ -1.5
SF3B1-208ENST00000470268 C11orf91Q3C1V1 193 aa5.69□□□□□ -1.5
SF3B1-208ENST00000470268 SLC9C2Q5TAH2 1124 aa5.69□□□□□ -1.5
SF3B1-208ENST00000470268 STRIP1Q5VSL9 837 aa5.69□□□□□ -1.5
SF3B1-208ENST00000470268 NIM1KQ8IY84 436 aa5.69□□□□□ -1.5
SF3B1-208ENST00000470268 NSUN4Q96CB9 384 aaKnown RBP5.69□□□□□ -1.5
SF3B1-208ENST00000470268 DCTN4Q9UJW0 460 aa5.69□□□□□ -1.5
SF3B1-208ENST00000470268 ZNRF3Q9ULT6 936 aa5.69□□□□□ -1.5
SF3B1-208ENST00000470268 SCN9AQ15858 1988 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms