RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 RASEFQ8IZ41 740 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 USP28Q96RU2 1077 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 DDX25Q9UHL0 483 aaKnown RBP16.74■□□□□ 0.27
LIMS2-213ENST00000469300 GUCA1BQ9UMX6 200 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 NEXMIFQ5QGS0 1516 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 FMNL1O95466 1100 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-213ENST00000469300 BCRP11274 1271 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 IFNAR1P17181 557 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 CCDC117Q8IWD4 279 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-213ENST00000469300 CDHR1Q96JP9 859 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 YWHAEP62258 255 aaKnown RBP16.73■□□□□ 0.27
LIMS2-213ENST00000469300 TUBB2AQ13885 445 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 CYP26C1Q6V0L0 522 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 ZNF589Q86UQ0 364 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-213ENST00000469300 TUBB2BQ9BVA1 445 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.73■□□□□ 0.27
LIMS2-213ENST00000469300 GINS2Q9Y248 185 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 GADD45BO75293 160 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-213ENST00000469300 USP17L8P0C7I0 530 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 MAATS1Q7Z4T9 603 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 MTA3Q9BTC8 594 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 LMBRD1Q9NUN5 540 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 COL4A3BPQ9Y5P4 624 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 TNNC1P63316 161 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 PLCB3Q01970 1234 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 BARGINQ6ZT62 677 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 TMTC1Q8IUR5 882 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-213ENST00000469300 AK8Q96MA6 479 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 PUS7LQ9H0K6 701 aaKnown RBP16.73■□□□□ 0.27
LIMS2-213ENST00000469300 NRBP2Q9NSY0 501 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 SERTAD1Q9UHV2 236 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 COMMD10Q9Y6G5 202 aa16.73■□□□□ 0.27
LIMS2-213ENST00000469300 PFKFB1P16118 471 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 SCRN1Q12765 414 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 ASIC2Q16515 512 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 CCDC122Q5T0U0 273 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 GPBP1Q86WP2 473 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 JPH2Q9BR39 696 aaPredicted RBP16.72■□□□□ 0.27
LIMS2-213ENST00000469300 CSRNP2Q9H175 543 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 MAPK8IP1Q9UQF2 711 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 A0A1W2PQ27 194 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 A0A1W2PQ64 194 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 A0A1W2PQD8 194 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 HSF2BPO75031 334 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 SLU7O95391 586 aaKnown RBP16.72■□□□□ 0.27
LIMS2-213ENST00000469300 IREB2P48200 963 aaKnown RBP16.72■□□□□ 0.27
LIMS2-213ENST00000469300 MYOCDQ8IZQ8 938 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 PI4K2BQ8TCG2 481 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 NELFBQ8WX92 580 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 ZSWIM4Q9H7M6 989 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 KIAA1468Q9P260 1216 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 BCCIPQ9P287 314 aaKnown RBP eCLIP16.72■□□□□ 0.27
LIMS2-213ENST00000469300 SLC17A8Q8NDX2 589 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 ARFGAP3Q9NP61 516 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 P4HA1P13674 534 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 NCAPG2Q86XI2 1143 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 SREK1Q8WXA9 508 aaKnown RBP16.72■□□□□ 0.27
LIMS2-213ENST00000469300 STRBPQ96SI9 672 aaKnown RBP16.72■□□□□ 0.27
LIMS2-213ENST00000469300 PIH1D3Q9NQM4 214 aaKnown RBP16.72■□□□□ 0.27
LIMS2-213ENST00000469300 PCDHA4Q9UN74 947 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 NRKQ7Z2Y5 1582 aa16.72■□□□□ 0.27
LIMS2-213ENST00000469300 GTPBP6O43824 516 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-213ENST00000469300 ASNSP08243 561 aa16.71■□□□□ 0.27
LIMS2-213ENST00000469300 FAM160B1Q5W0V3 765 aa16.71■□□□□ 0.27
LIMS2-213ENST00000469300 ZNF354CQ86Y25 554 aa16.71■□□□□ 0.27
LIMS2-213ENST00000469300 PI16Q6UXB8 463 aa16.71■□□□□ 0.27
LIMS2-213ENST00000469300 CCDC50Q8IVM0 306 aa16.71■□□□□ 0.27
LIMS2-213ENST00000469300 CMTR1Q8N1G2 835 aaKnown RBP16.71■□□□□ 0.27
LIMS2-213ENST00000469300 WDR11Q9BZH6 1224 aa16.71■□□□□ 0.27
LIMS2-213ENST00000469300 RTEL1Q9NZ71 1219 aa16.71■□□□□ 0.27
LIMS2-213ENST00000469300 HOXA7P31268 230 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-213ENST00000469300 ADCK5Q3MIX3 580 aa16.71■□□□□ 0.27
LIMS2-213ENST00000469300 GOLGA1Q92805 767 aa16.71■□□□□ 0.27
LIMS2-213ENST00000469300 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.27
LIMS2-213ENST00000469300 STMN4Q9H169 189 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-213ENST00000469300 CBX8Q9HC52 389 aa16.71■□□□□ 0.27
LIMS2-213ENST00000469300 SSX2IPQ9Y2D8 614 aa16.71■□□□□ 0.27
LIMS2-213ENST00000469300 TECPR2O15040 1411 aa16.71■□□□□ 0.26
LIMS2-213ENST00000469300 SH2B2O14492 632 aaPredicted RBP16.71■□□□□ 0.26
LIMS2-213ENST00000469300 TMOD1P28289 359 aa16.71■□□□□ 0.26
LIMS2-213ENST00000469300 TBC1D9BQ66K14 1250 aa16.71■□□□□ 0.26
LIMS2-213ENST00000469300 TMEM179Q6ZVK1 233 aa16.71■□□□□ 0.26
LIMS2-213ENST00000469300 CD209Q9NNX6 404 aa16.71■□□□□ 0.26
LIMS2-213ENST00000469300 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
LIMS2-213ENST00000469300 TECP42680 631 aa16.7■□□□□ 0.26
LIMS2-213ENST00000469300 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
LIMS2-213ENST00000469300 ZNF569Q5MCW4 686 aa16.7■□□□□ 0.26
LIMS2-213ENST00000469300 SEL1L2Q5TEA6 688 aa16.7■□□□□ 0.26
LIMS2-213ENST00000469300 MAEAQ7L5Y9 396 aa16.7■□□□□ 0.26
LIMS2-213ENST00000469300 GSTA5Q7RTV2 222 aa16.7■□□□□ 0.26
LIMS2-213ENST00000469300 JAKMIP2Q96AA8 810 aa16.7■□□□□ 0.26
LIMS2-213ENST00000469300 CCDC97Q96F63 343 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-213ENST00000469300 MCAMP43121 646 aa16.7■□□□□ 0.26
LIMS2-213ENST00000469300 DIXDC1Q155Q3 683 aa16.7■□□□□ 0.26
LIMS2-213ENST00000469300 FNBP4Q8N3X1 1017 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-213ENST00000469300 ATP6V0A1Q93050 837 aa16.7■□□□□ 0.26
LIMS2-213ENST00000469300 N4BP1O75113 896 aaKnown RBP16.7■□□□□ 0.26
LIMS2-213ENST00000469300 METTL14Q9HCE5 456 aaKnown RBP16.7■□□□□ 0.26
LIMS2-213ENST00000469300 XKR9Q5GH70 373 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms