RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 MMTAG2Q9BU76 263 aaKnown RBP11.13□□□□□ -0.63
NUP50-214ENST00000469163 ZNF408Q9H9D4 720 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 RGL1Q9NZL6 768 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 POLLQ9UGP5 575 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 NUB1Q9Y5A7 615 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 E7EWF7 191 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 NEMFO60524 1076 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 TADA3O75528 432 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 GOLGA8HP0CJ92 632 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 ADGRA1Q86SQ6 560 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 TMEM110Q86TL2 294 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 FAM81AQ8TBF8 368 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 KLC4Q9NSK0 619 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 TMOD4Q9NZQ9 345 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 DDX20Q9UHI6 824 aaKnown RBP11.13□□□□□ -0.63
NUP50-214ENST00000469163 TPCN1Q9ULQ1 816 aa11.13□□□□□ -0.63
NUP50-214ENST00000469163 SHTN1A0MZ66 631 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 GOLGA6L19H0YKK7 550 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 DPEP1P16444 411 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 ME3Q16798 604 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 GNPTABQ3T906 1256 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 SLC27A3Q5K4L6 730 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 MIGA2Q7L4E1 593 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 MKL1Q969V6 931 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 ANKRD2Q9GZV1 360 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 SMAPO00193 183 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 MYBL1P10243 752 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 UBE2HP62256 183 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 PRPF4BQ13523 1007 aaKnown RBP11.12□□□□□ -0.63
NUP50-214ENST00000469163 ENOX2Q16206 610 aaKnown RBP11.12□□□□□ -0.63
NUP50-214ENST00000469163 ANO6Q4KMQ2 910 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 GPR161Q8N6U8 529 aaKnown RBP11.12□□□□□ -0.63
NUP50-214ENST00000469163 BICD2Q8TD16 824 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 OSBPL3Q9H4L5 887 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 SAMM50Q9Y512 469 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 ADD1P35611 737 aaKnown RBP11.12□□□□□ -0.63
NUP50-214ENST00000469163 ARHGAP22Q7Z5H3 698 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 ZNF444Q8N0Y2 327 aaPredicted RBP11.12□□□□□ -0.63
NUP50-214ENST00000469163 RASSF8Q8NHQ8 419 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 SLC26A6Q9BXS9 759 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 CBX8Q9HC52 389 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 RTEL1Q9NZ71 1219 aa11.12□□□□□ -0.63
NUP50-214ENST00000469163 LMO7Q8WWI1 1683 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 ZEB2O60315 1214 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 HSPA4P34932 840 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 MPP3Q13368 585 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 MICALCLQ6ZW33 695 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 HDXQ7Z353 690 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.11□□□□□ -0.63
NUP50-214ENST00000469163 FAM114A1Q8IWE2 563 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 AFAP1L1Q8TED9 768 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 JDP2Q8WYK2 163 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 SUN2Q9UH99 717 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 FZD1Q9UP38 647 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 IFNL3Q8IZI9 196 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 SYCP3Q8IZU3 236 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 AIFM3Q96NN9 605 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 SLC12A7Q9Y666 1083 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 CNTNAP4Q9C0A0 1308 aa11.11□□□□□ -0.63
NUP50-214ENST00000469163 UBE2Q2LH0YL09 131 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 POLRMTO00411 1230 aaKnown RBP11.1□□□□□ -0.63
NUP50-214ENST00000469163 CIAO1O76071 339 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 BTDP43251 543 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 TYRO3Q06418 890 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 TMEM62Q0P6H9 643 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 CCDC93Q567U6 631 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 OGFOD1Q8N543 542 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 NCOA7Q8NI08 942 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 BCAS4Q8TDM0 211 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 SENP2Q9HC62 589 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 XDHP47989 1333 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 FAM208AQ9UK61 1670 aaKnown RBP11.1□□□□□ -0.63
NUP50-214ENST00000469163 IQCB1Q15051 598 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 GPR162Q16538 588 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 FILIP1LQ4L180 1135 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 RNF187Q5TA31 235 aaPredicted RBP11.1□□□□□ -0.63
NUP50-214ENST00000469163 CDC37L1Q7L3B6 337 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 SAPCD2Q86UD0 394 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 CCDC84Q86UT8 332 aaPredicted RBP11.1□□□□□ -0.63
NUP50-214ENST00000469163 SH3RF3Q8TEJ3 882 aaPredicted RBP11.1□□□□□ -0.63
NUP50-214ENST00000469163 CRNKL1Q9BZJ0 848 aaKnown RBP11.1□□□□□ -0.63
NUP50-214ENST00000469163 CD209Q9NNX6 404 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 CDC25CP30307 473 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 PDIA5Q14554 519 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 RCSD1Q6JBY9 416 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 TBC1D16Q8TBP0 767 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 FUCA2Q9BTY2 467 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 HOMER3Q9NSC5 361 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 USP40Q9NVE5 1235 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 UTYO14607 1347 aa11.1□□□□□ -0.63
NUP50-214ENST00000469163 SPDYE3A6NKU9 549 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 GOLGA8AA7E2F4 631 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 GJA8P48165 433 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 TTLL12Q14166 644 aaPredicted RBP11.09□□□□□ -0.63
NUP50-214ENST00000469163 WLSQ5T9L3 541 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 CDCA2Q69YH5 1023 aaPredicted RBP11.09□□□□□ -0.63
NUP50-214ENST00000469163 STOX1Q6ZVD7 989 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 SPICE1Q8N0Z3 855 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 NAT10Q9H0A0 1025 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms