RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 WHRNQ9P202 907 aa8.55□□□□□ -1.04
XRN1-207ENST00000468894 TMEM82A0PJX8 343 aa8.54□□□□□ -1.04
XRN1-207ENST00000468894 ZNF205O95201 554 aa8.54□□□□□ -1.04
XRN1-207ENST00000468894 PAPLNO95428 1278 aa8.54□□□□□ -1.04
XRN1-207ENST00000468894 ZGLP1P0C6A0 271 aa8.54□□□□□ -1.04
XRN1-207ENST00000468894 BMP8BP34820 402 aa8.54□□□□□ -1.04
XRN1-207ENST00000468894 ZNF513Q8N8E2 541 aaPredicted RBP8.54□□□□□ -1.04
XRN1-207ENST00000468894 ADCY4Q8NFM4 1077 aa8.54□□□□□ -1.04
XRN1-207ENST00000468894 GBP3Q9H0R5 595 aa8.54□□□□□ -1.04
XRN1-207ENST00000468894 NOL6Q9H6R4 1146 aaKnown RBP8.54□□□□□ -1.04
XRN1-207ENST00000468894 FKTNO75072 461 aa8.53□□□□□ -1.04
XRN1-207ENST00000468894 GSNP06396 782 aa8.53□□□□□ -1.04
XRN1-207ENST00000468894 ATP2B1P20020 1258 aa8.53□□□□□ -1.04
XRN1-207ENST00000468894 GDNFP39905 211 aa8.53□□□□□ -1.04
XRN1-207ENST00000468894 FXNQ16595 210 aa8.53□□□□□ -1.04
XRN1-207ENST00000468894 MCTP1Q6DN14 999 aa8.53□□□□□ -1.04
XRN1-207ENST00000468894 ZPBP2Q6X784 338 aa8.53□□□□□ -1.04
XRN1-207ENST00000468894 ATG4DQ86TL0 474 aaPredicted RBP8.53□□□□□ -1.04
XRN1-207ENST00000468894 G6PC3Q9BUM1 346 aa8.53□□□□□ -1.04
XRN1-207ENST00000468894 APEX2Q9UBZ4 518 aa8.53□□□□□ -1.04
XRN1-207ENST00000468894 EBF1Q9UH73 591 aa8.53□□□□□ -1.04
XRN1-207ENST00000468894 A0A087WZG4 1122 aa8.52□□□□□ -1.05
XRN1-207ENST00000468894 ANKRD34BA5PLL1 514 aa8.52□□□□□ -1.05
XRN1-207ENST00000468894 STK10O94804 968 aaKnown RBP8.52□□□□□ -1.05
XRN1-207ENST00000468894 TAL1P17542 331 aaPredicted RBP8.52□□□□□ -1.05
XRN1-207ENST00000468894 HK2P52789 917 aa8.52□□□□□ -1.05
XRN1-207ENST00000468894 ZDHHC15Q96MV8 337 aa8.52□□□□□ -1.05
XRN1-207ENST00000468894 SSU72P8A0A1W2PR75 194 aa8.51□□□□□ -1.05
XRN1-207ENST00000468894 DDAH1O94760 285 aa8.51□□□□□ -1.05
XRN1-207ENST00000468894 GJB6O95452 261 aa8.51□□□□□ -1.05
XRN1-207ENST00000468894 VAV1P15498 845 aa8.51□□□□□ -1.05
XRN1-207ENST00000468894 RPL10P27635 214 aaKnown RBP8.51□□□□□ -1.05
XRN1-207ENST00000468894 DDR2Q16832 855 aa8.51□□□□□ -1.05
XRN1-207ENST00000468894 RTP2Q5QGT7 225 aa8.51□□□□□ -1.05
XRN1-207ENST00000468894 WAPLQ7Z5K2 1190 aa8.51□□□□□ -1.05
XRN1-207ENST00000468894 ADAT2Q7Z6V5 191 aaKnown RBP8.51□□□□□ -1.05
XRN1-207ENST00000468894 DHX38Q92620 1227 aaKnown RBP8.51□□□□□ -1.05
XRN1-207ENST00000468894 CCDC120Q96HB5 630 aa8.51□□□□□ -1.05
XRN1-207ENST00000468894 SP110Q9HB58 689 aa8.51□□□□□ -1.05
XRN1-207ENST00000468894 CGGBP1Q9UFW8 167 aaPredicted RBP8.51□□□□□ -1.05
XRN1-207ENST00000468894 R3HCC1Q9Y3T6 440 aaKnown RBP8.51□□□□□ -1.05
XRN1-207ENST00000468894 PPM1BO75688 479 aa8.5□□□□□ -1.05
XRN1-207ENST00000468894 GTF2F1P35269 517 aaKnown RBP eCLIP8.5□□□□□ -1.05
XRN1-207ENST00000468894 ZNF143P52747 638 aaPredicted RBP8.5□□□□□ -1.05
XRN1-207ENST00000468894 ERVFC1P60507 584 aa8.5□□□□□ -1.05
XRN1-207ENST00000468894 RAB33AQ14088 237 aa8.5□□□□□ -1.05
XRN1-207ENST00000468894 PPP2R5DQ14738 602 aa8.5□□□□□ -1.05
XRN1-207ENST00000468894 LINC01599Q8WXQ3 324 aa8.5□□□□□ -1.05
XRN1-207ENST00000468894 SLC12A9Q9BXP2 914 aa8.5□□□□□ -1.05
XRN1-207ENST00000468894 ST7Q9NRC1 585 aa8.5□□□□□ -1.05
XRN1-207ENST00000468894 SF3B6Q9Y3B4 125 aaKnown RBP8.5□□□□□ -1.05
XRN1-207ENST00000468894 SUSD5O60279 629 aa8.49□□□□□ -1.05
XRN1-207ENST00000468894 HPXP02790 462 aa8.49□□□□□ -1.05
XRN1-207ENST00000468894 DUSP4Q13115 394 aa8.49□□□□□ -1.05
XRN1-207ENST00000468894 SF3A1Q15459 793 aaKnown RBP8.49□□□□□ -1.05
XRN1-207ENST00000468894 FYB2Q5VWT5 728 aa8.49□□□□□ -1.05
XRN1-207ENST00000468894 CWF19L1Q69YN2 538 aaKnown RBP8.49□□□□□ -1.05
XRN1-207ENST00000468894 CKAP2LQ8IYA6 745 aa8.49□□□□□ -1.05
XRN1-207ENST00000468894 ARHGEF39Q8N4T4 335 aa8.49□□□□□ -1.05
XRN1-207ENST00000468894 PDZD8Q8NEN9 1154 aa8.49□□□□□ -1.05
XRN1-207ENST00000468894 SREK1Q8WXA9 508 aaKnown RBP8.49□□□□□ -1.05
XRN1-207ENST00000468894 ARMC5Q96C12 935 aa8.49□□□□□ -1.05
XRN1-207ENST00000468894 RCC1LQ96I51 464 aaKnown RBP8.49□□□□□ -1.05
XRN1-207ENST00000468894 MAP6Q96JE9 813 aa8.49□□□□□ -1.05
XRN1-207ENST00000468894 AP5S1Q9NUS5 200 aa8.49□□□□□ -1.05
XRN1-207ENST00000468894 DIS3Q9Y2L1 958 aaKnown RBP8.49□□□□□ -1.05
XRN1-207ENST00000468894 CD3EP07766 207 aa8.48□□□□□ -1.05
XRN1-207ENST00000468894 NAT2P11245 290 aa8.48□□□□□ -1.05
XRN1-207ENST00000468894 JUNBP17275 347 aaPredicted RBP8.48□□□□□ -1.05
XRN1-207ENST00000468894 CEBPAP49715 358 aaPredicted RBP8.48□□□□□ -1.05
XRN1-207ENST00000468894 FCRL2Q96LA5 508 aaPredicted RBP8.48□□□□□ -1.05
XRN1-207ENST00000468894 MCMBPQ9BTE3 642 aa8.48□□□□□ -1.05
XRN1-207ENST00000468894 LGR4Q9BXB1 951 aa8.48□□□□□ -1.05
XRN1-207ENST00000468894 ERVK13-1Q9NX77 482 aa8.48□□□□□ -1.05
XRN1-207ENST00000468894 SUGT1Q9Y2Z0 365 aa8.48□□□□□ -1.05
XRN1-207ENST00000468894 BIN1O00499 593 aa8.47□□□□□ -1.05
XRN1-207ENST00000468894 USP2O75604 605 aaPredicted RBP8.47□□□□□ -1.05
XRN1-207ENST00000468894 IFNGR1P15260 489 aa8.47□□□□□ -1.05
XRN1-207ENST00000468894 SYTL4Q96C24 671 aaPredicted RBP8.47□□□□□ -1.05
XRN1-207ENST00000468894 HHIPL1Q96JK4 782 aa8.47□□□□□ -1.05
XRN1-207ENST00000468894 APBA2Q99767 749 aa8.47□□□□□ -1.05
XRN1-207ENST00000468894 CDADC1Q9BWV3 514 aa8.47□□□□□ -1.05
XRN1-207ENST00000468894 TRIM55Q9BYV6 548 aa8.47□□□□□ -1.05
XRN1-207ENST00000468894 ZMYM5Q9UJ78 669 aa8.47□□□□□ -1.05
XRN1-207ENST00000468894 CARMIL2Q6F5E8 1435 aa8.46□□□□□ -1.05
XRN1-207ENST00000468894 GSTM1P09488 218 aa8.46□□□□□ -1.06
XRN1-207ENST00000468894 ENDOUP21128 410 aaKnown RBP8.46□□□□□ -1.06
XRN1-207ENST00000468894 TRHRP34981 398 aaPredicted RBP8.46□□□□□ -1.06
XRN1-207ENST00000468894 AFMP43652 599 aa8.46□□□□□ -1.06
XRN1-207ENST00000468894 POU4F1Q01851 419 aa8.46□□□□□ -1.06
XRN1-207ENST00000468894 GRB10Q13322 594 aa8.46□□□□□ -1.06
XRN1-207ENST00000468894 SLC10A6Q3KNW5 377 aa8.46□□□□□ -1.06
XRN1-207ENST00000468894 TIGD5Q53EQ6 642 aa8.46□□□□□ -1.06
XRN1-207ENST00000468894 ANKS4BQ8N8V4 417 aa8.46□□□□□ -1.06
XRN1-207ENST00000468894 BVESQ8NE79 360 aa8.46□□□□□ -1.06
XRN1-207ENST00000468894 FCRL3Q96P31 734 aaPredicted RBP8.46□□□□□ -1.06
XRN1-207ENST00000468894 AKT3Q9Y243 479 aa8.46□□□□□ -1.06
XRN1-207ENST00000468894 EMC9Q9Y3B6 208 aa8.46□□□□□ -1.06
XRN1-207ENST00000468894 FITM1A5D6W6 292 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 NOTOA8MTQ0 251 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms