RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ZNF512BQ96KM6 892 aaPredicted RBP7.84□□□□□ -1.15
LSM5-209ENST00000468872 G6PC3Q9BUM1 346 aa7.84□□□□□ -1.15
LSM5-209ENST00000468872 ZNF408Q9H9D4 720 aa7.84□□□□□ -1.15
LSM5-209ENST00000468872 TNFRSF10CO14798 259 aa7.83□□□□□ -1.16
LSM5-209ENST00000468872 C1QTNF9P0C862 333 aa7.83□□□□□ -1.16
LSM5-209ENST00000468872 RPL10P27635 214 aaKnown RBP7.83□□□□□ -1.16
LSM5-209ENST00000468872 ETFBP38117 255 aa7.83□□□□□ -1.16
LSM5-209ENST00000468872 DPH6Q7L8W6 267 aa7.83□□□□□ -1.16
LSM5-209ENST00000468872 SRRTQ9BXP5 876 aaKnown RBP7.83□□□□□ -1.16
LSM5-209ENST00000468872 FOXP3Q9BZS1 431 aa7.83□□□□□ -1.16
LSM5-209ENST00000468872 LNPKQ9C0E8 428 aa7.83□□□□□ -1.16
LSM5-209ENST00000468872 CWC22Q9HCG8 908 aaKnown RBP7.83□□□□□ -1.16
LSM5-209ENST00000468872 MRVI1Q9Y6F6 885 aa7.83□□□□□ -1.16
LSM5-209ENST00000468872 NFIBO00712 420 aa7.82□□□□□ -1.16
LSM5-209ENST00000468872 PRAMEF1O95521 474 aa7.82□□□□□ -1.16
LSM5-209ENST00000468872 CPLX3Q8WVH0 158 aa7.82□□□□□ -1.16
LSM5-209ENST00000468872 SHDQ96IW2 340 aa7.82□□□□□ -1.16
LSM5-209ENST00000468872 SLC6A18Q96N87 628 aa7.82□□□□□ -1.16
LSM5-209ENST00000468872 SLC9A7Q96T83 725 aa7.82□□□□□ -1.16
LSM5-209ENST00000468872 HIRIP3Q9BW71 556 aaPredicted RBP7.82□□□□□ -1.16
LSM5-209ENST00000468872 PRDM14Q9GZV8 571 aa7.82□□□□□ -1.16
LSM5-209ENST00000468872 GPR160Q9UJ42 338 aa7.82□□□□□ -1.16
LSM5-209ENST00000468872 TCFL5Q9UL49 500 aa7.82□□□□□ -1.16
LSM5-209ENST00000468872 YBX2Q9Y2T7 364 aaKnown RBP7.82□□□□□ -1.16
LSM5-209ENST00000468872 SIGLEC6O43699 453 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 PSPNO60542 156 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 TMEM253P0C7T8 217 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 PCBP3P57721 371 aaKnown RBP7.81□□□□□ -1.16
LSM5-209ENST00000468872 SNX17Q15036 470 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 SPOCD1Q6ZMY3 1216 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 WAPLQ7Z5K2 1190 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 ANKLE2Q86XL3 938 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 IRF2BP1Q8IU81 584 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 LINC00116Q8NCU8 138 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 PMFBP1Q8TBY8 1022 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 ANAPC16Q96DE5 110 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 TOX2Q96NM4 488 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 SLC6A17Q9H1V8 727 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 ZNRF3Q9ULT6 936 aa7.81□□□□□ -1.16
LSM5-209ENST00000468872 SSU72P8A0A1W2PR75 194 aa7.8□□□□□ -1.16
LSM5-209ENST00000468872 TMEM82A0PJX8 343 aa7.8□□□□□ -1.16
LSM5-209ENST00000468872 NOTOA8MTQ0 251 aa7.8□□□□□ -1.16
LSM5-209ENST00000468872 CFPP27918 469 aa7.8□□□□□ -1.16
LSM5-209ENST00000468872 SHISA4Q96DD7 197 aa7.8□□□□□ -1.16
LSM5-209ENST00000468872 INTS4Q96HW7 963 aaKnown RBP7.8□□□□□ -1.16
LSM5-209ENST00000468872 FERD3LQ96RJ6 166 aa7.8□□□□□ -1.16
LSM5-209ENST00000468872 SLC26A8Q96RN1 970 aa7.8□□□□□ -1.16
LSM5-209ENST00000468872 MKRN2Q9H000 416 aaKnown RBP7.8□□□□□ -1.16
LSM5-209ENST00000468872 ZMYM5Q9UJ78 669 aa7.8□□□□□ -1.16
LSM5-209ENST00000468872 MINPP1Q9UNW1 487 aa7.8□□□□□ -1.16
LSM5-209ENST00000468872 ETV2O00321 342 aaPredicted RBP7.79□□□□□ -1.16
LSM5-209ENST00000468872 FKTNO75072 461 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 USP2O75604 605 aaPredicted RBP7.79□□□□□ -1.16
LSM5-209ENST00000468872 SYPP08247 313 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 MED14OSP0DP75 135 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 ACRP10323 421 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 GIPRP48546 466 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 EIF6P56537 245 aaKnown RBP7.79□□□□□ -1.16
LSM5-209ENST00000468872 BBS9Q3SYG4 887 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 FBXW10Q5XX13 1052 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 LRRC56Q8IYG6 542 aaPredicted RBP7.79□□□□□ -1.16
LSM5-209ENST00000468872 FAM169BQ8N8A8 192 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 MAP6Q96JE9 813 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 CD320Q9NPF0 282 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 CHST7Q9NS84 486 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 SHROOM4Q9ULL8 1493 aa7.79□□□□□ -1.16
LSM5-209ENST00000468872 EFEMP2O95967 443 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 GLDCP23378 1020 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 GALK1P51570 392 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 KRTAP19-4Q3LI73 84 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 CCDC144BQ3MJ40 725 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 INTS3Q68E01 1043 aaKnown RBP7.78□□□□□ -1.16
LSM5-209ENST00000468872 ATG14Q6ZNE5 492 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 ANKS3Q6ZW76 656 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 C1QL4Q86Z23 238 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 CKAP2LQ8IYA6 745 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 KCNN1Q92952 543 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 PRKAG3Q9UGI9 489 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 PCDHB12Q9Y5F1 795 aa7.78□□□□□ -1.16
LSM5-209ENST00000468872 FAM86C2PA6NEL3 165 aa7.77□□□□□ -1.17
LSM5-209ENST00000468872 MEIS1O00470 390 aa7.77□□□□□ -1.17
LSM5-209ENST00000468872 IMPDH2P12268 514 aa7.77□□□□□ -1.17
LSM5-209ENST00000468872 KIR2DL1P43626 348 aaPredicted RBP7.77□□□□□ -1.17
LSM5-209ENST00000468872 KIR2DL2P43627 348 aaPredicted RBP7.77□□□□□ -1.17
LSM5-209ENST00000468872 AUHQ13825 339 aaKnown RBP7.77□□□□□ -1.17
LSM5-209ENST00000468872 SOGA3Q5TF21 947 aa7.77□□□□□ -1.17
LSM5-209ENST00000468872 ZPBP2Q6X784 338 aa7.77□□□□□ -1.17
LSM5-209ENST00000468872 ZNF605Q86T29 641 aa7.77□□□□□ -1.17
LSM5-209ENST00000468872 NLRX1Q86UT6 975 aa7.77□□□□□ -1.17
LSM5-209ENST00000468872 RBBP8NLQ8NC74 664 aaPredicted RBP7.77□□□□□ -1.17
LSM5-209ENST00000468872 HHIPL1Q96JK4 782 aa7.77□□□□□ -1.17
LSM5-209ENST00000468872 DHRS1Q96LJ7 313 aa7.77□□□□□ -1.17
LSM5-209ENST00000468872 GFOD1Q9NXC2 390 aa7.77□□□□□ -1.17
LSM5-209ENST00000468872 FBXL21Q9UKT6 434 aa7.77□□□□□ -1.17
LSM5-209ENST00000468872 TCAF2A6NFQ2 919 aa7.76□□□□□ -1.17
LSM5-209ENST00000468872 NPIPB6E9PJ23 425 aa7.76□□□□□ -1.17
LSM5-209ENST00000468872 SMAD7O15105 426 aaKnown RBP7.76□□□□□ -1.17
LSM5-209ENST00000468872 KLF4O43474 513 aa7.76□□□□□ -1.17
LSM5-209ENST00000468872 NRDCO43847 1150 aa7.76□□□□□ -1.17
LSM5-209ENST00000468872 PDE6BP35913 854 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms