RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 SMC1BQ8NDV3 1235 aa20.26■□□□□ 0.83
RPL39-202ENST00000468844 RBM46Q8TBY0 533 aaKnown RBP20.26■□□□□ 0.83
RPL39-202ENST00000468844 PIGSQ96S52 555 aa20.26■□□□□ 0.83
RPL39-202ENST00000468844 JMJD4Q9H9V9 463 aa20.26■□□□□ 0.83
RPL39-202ENST00000468844 PPIL2Q13356 520 aa20.25■□□□□ 0.83
RPL39-202ENST00000468844 PFKFB3Q16875 520 aaPredicted RBP20.25■□□□□ 0.83
RPL39-202ENST00000468844 SH3D19Q5HYK7 790 aa20.25■□□□□ 0.83
RPL39-202ENST00000468844 WASF1Q92558 559 aa20.25■□□□□ 0.83
RPL39-202ENST00000468844 SHISA4Q96DD7 197 aa20.25■□□□□ 0.83
RPL39-202ENST00000468844 RBM27Q9P2N5 1060 aaKnown RBP20.25■□□□□ 0.83
RPL39-202ENST00000468844 TOMM70O94826 608 aa20.25■□□□□ 0.83
RPL39-202ENST00000468844 GJA5P36382 358 aa20.25■□□□□ 0.83
RPL39-202ENST00000468844 NUCB2P80303 420 aa20.25■□□□□ 0.83
RPL39-202ENST00000468844 C8orf76Q96K31 380 aa20.25■□□□□ 0.83
RPL39-202ENST00000468844 KCNH4Q9UQ05 1017 aa20.25■□□□□ 0.83
RPL39-202ENST00000468844 MTMR6Q9Y217 621 aa20.25■□□□□ 0.83
RPL39-202ENST00000468844 VPS37CA5D8V6 355 aaPredicted RBP20.24■□□□□ 0.83
RPL39-202ENST00000468844 BRD1O95696 1058 aa20.24■□□□□ 0.83
RPL39-202ENST00000468844 SCG2P13521 617 aa20.24■□□□□ 0.83
RPL39-202ENST00000468844 IKQ13123 557 aaPredicted RBP20.24■□□□□ 0.83
RPL39-202ENST00000468844 OTUD7BQ6GQQ9 843 aa20.24■□□□□ 0.83
RPL39-202ENST00000468844 FBXO18Q8NFZ0 1043 aa20.24■□□□□ 0.83
RPL39-202ENST00000468844 MTMR8Q96EF0 704 aa20.24■□□□□ 0.83
RPL39-202ENST00000468844 SLC10A4Q96EP9 437 aa20.24■□□□□ 0.83
RPL39-202ENST00000468844 RRP36Q96EU6 259 aaKnown RBP20.24■□□□□ 0.83
RPL39-202ENST00000468844 FBXO28Q9NVF7 368 aa20.24■□□□□ 0.83
RPL39-202ENST00000468844 A0A0G2JLL6 359 aaPredicted RBP20.23■□□□□ 0.83
RPL39-202ENST00000468844 PLA2G6O60733 806 aa20.23■□□□□ 0.83
RPL39-202ENST00000468844 GUCY1B3Q02153 619 aa20.23■□□□□ 0.83
RPL39-202ENST00000468844 SYDE2Q5VT97 1194 aa20.23■□□□□ 0.83
RPL39-202ENST00000468844 PRRT2Q7Z6L0 340 aaPredicted RBP20.23■□□□□ 0.83
RPL39-202ENST00000468844 RPAP3Q9H6T3 665 aaPredicted RBP20.23■□□□□ 0.83
RPL39-202ENST00000468844 PRR12Q9ULL5 1215 aa20.23■□□□□ 0.83
RPL39-202ENST00000468844 A0A0G2JMZ2 1700 aa20.23■□□□□ 0.83
RPL39-202ENST00000468844 GPKOWQ92917 476 aaPredicted RBP eCLIP20.23■□□□□ 0.83
RPL39-202ENST00000468844 VPS54Q9P1Q0 977 aa20.23■□□□□ 0.83
RPL39-202ENST00000468844 SEC63Q9UGP8 760 aaKnown RBP20.23■□□□□ 0.83
RPL39-202ENST00000468844 FEM1BQ9UK73 627 aa20.23■□□□□ 0.83
RPL39-202ENST00000468844 WDR33Q9C0J8 1336 aaKnown RBP20.22■□□□□ 0.83
RPL39-202ENST00000468844 H3BQV1 296 aa20.22■□□□□ 0.83
RPL39-202ENST00000468844 CXCL11O14625 94 aa20.22■□□□□ 0.83
RPL39-202ENST00000468844 HUNKP57058 714 aa20.22■□□□□ 0.83
RPL39-202ENST00000468844 NBR1Q14596 966 aa20.22■□□□□ 0.83
RPL39-202ENST00000468844 IFFO2Q5TF58 517 aa20.22■□□□□ 0.83
RPL39-202ENST00000468844 TANGO6Q9C0B7 1094 aa20.22■□□□□ 0.83
RPL39-202ENST00000468844 TMOD4Q9NZQ9 345 aa20.22■□□□□ 0.83
RPL39-202ENST00000468844 RBBP6Q7Z6E9 1792 aaKnown RBP20.22■□□□□ 0.83
RPL39-202ENST00000468844 ZBTB5O15062 677 aa20.21■□□□□ 0.83
RPL39-202ENST00000468844 PDIA4P13667 645 aaKnown RBP20.21■□□□□ 0.83
RPL39-202ENST00000468844 FOXD4L5Q5VV16 416 aaPredicted RBP20.21■□□□□ 0.83
RPL39-202ENST00000468844 KRT40Q6A162 431 aa20.21■□□□□ 0.83
RPL39-202ENST00000468844 WWC2Q6AWC2 1192 aa20.21■□□□□ 0.83
RPL39-202ENST00000468844 TYW1BQ6NUM6 668 aa20.21■□□□□ 0.83
RPL39-202ENST00000468844 SAPCD2Q86UD0 394 aa20.21■□□□□ 0.83
RPL39-202ENST00000468844 CHURC1Q8WUH1 139 aa20.21■□□□□ 0.83
RPL39-202ENST00000468844 FOXD4L4Q8WXT5 416 aaPredicted RBP20.21■□□□□ 0.83
RPL39-202ENST00000468844 KIFC2Q96AC6 838 aa20.21■□□□□ 0.83
RPL39-202ENST00000468844 PPP1R11O60927 126 aaPredicted RBP20.21■□□□□ 0.83
RPL39-202ENST00000468844 ZSCAN22P10073 491 aaPredicted RBP20.21■□□□□ 0.83
RPL39-202ENST00000468844 CDC37Q16543 378 aaPredicted RBP20.21■□□□□ 0.83
RPL39-202ENST00000468844 TREML2Q5T2D2 321 aa20.21■□□□□ 0.83
RPL39-202ENST00000468844 FAM160B2Q86V87 743 aa20.21■□□□□ 0.83
RPL39-202ENST00000468844 WNK4Q96J92 1243 aa20.21■□□□□ 0.83
RPL39-202ENST00000468844 PNMA6FA0A0J9YX94 578 aa20.2■□□□□ 0.82
RPL39-202ENST00000468844 FLOT1O75955 427 aa20.2■□□□□ 0.82
RPL39-202ENST00000468844 QRICH1Q2TAL8 776 aa20.2■□□□□ 0.82
RPL39-202ENST00000468844 HEATR3Q7Z4Q2 680 aa20.2■□□□□ 0.82
RPL39-202ENST00000468844 PROCA1Q8NCQ7 364 aaPredicted RBP20.2■□□□□ 0.82
RPL39-202ENST00000468844 RGS22Q8NE09 1264 aa20.2■□□□□ 0.82
RPL39-202ENST00000468844 SLF1Q9BQI6 1058 aa20.2■□□□□ 0.82
RPL39-202ENST00000468844 BARHL2Q9NY43 387 aa20.2■□□□□ 0.82
RPL39-202ENST00000468844 KCNJ14Q9UNX9 436 aa20.2■□□□□ 0.82
RPL39-202ENST00000468844 SNAP25P60880 206 aa20.19■□□□□ 0.82
RPL39-202ENST00000468844 MOGSQ13724 837 aa20.19■□□□□ 0.82
RPL39-202ENST00000468844 FERMT3Q86UX7 667 aa20.19■□□□□ 0.82
RPL39-202ENST00000468844 PRPF38AQ8NAV1 312 aaKnown RBP20.19■□□□□ 0.82
RPL39-202ENST00000468844 STXBP3O00186 592 aa20.19■□□□□ 0.82
RPL39-202ENST00000468844 F13A1P00488 732 aa20.19■□□□□ 0.82
RPL39-202ENST00000468844 TRIM29Q14134 588 aa20.19■□□□□ 0.82
RPL39-202ENST00000468844 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
RPL39-202ENST00000468844 RANBP17Q9H2T7 1088 aaKnown RBP20.19■□□□□ 0.82
RPL39-202ENST00000468844 MYH7BA7E2Y1 1941 aa20.18■□□□□ 0.82
RPL39-202ENST00000468844 MMP1P03956 469 aa20.18■□□□□ 0.82
RPL39-202ENST00000468844 XBP1P17861 261 aa20.18■□□□□ 0.82
RPL39-202ENST00000468844 GADL1Q6ZQY3 521 aa20.18■□□□□ 0.82
RPL39-202ENST00000468844 CATSPERGQ6ZRH7 1159 aa20.18■□□□□ 0.82
RPL39-202ENST00000468844 PHF20Q9BVI0 1012 aa20.18■□□□□ 0.82
RPL39-202ENST00000468844 PPP1R9AQ9ULJ8 1098 aa20.18■□□□□ 0.82
RPL39-202ENST00000468844 hCG_1984214I3L0E3 225 aa20.17■□□□□ 0.82
RPL39-202ENST00000468844 ZBTB48P10074 688 aaPredicted RBP20.17■□□□□ 0.82
RPL39-202ENST00000468844 MKRN3Q13064 507 aaKnown RBP20.17■□□□□ 0.82
RPL39-202ENST00000468844 SNAPC2Q13487 334 aa20.17■□□□□ 0.82
RPL39-202ENST00000468844 NPY5RQ15761 445 aa20.17■□□□□ 0.82
RPL39-202ENST00000468844 ZNF713Q8N859 430 aaPredicted RBP20.17■□□□□ 0.82
RPL39-202ENST00000468844 TNPO1Q92973 898 aaKnown RBP20.17■□□□□ 0.82
RPL39-202ENST00000468844 COA7Q96BR5 231 aa20.17■□□□□ 0.82
RPL39-202ENST00000468844 SH3GLB2Q9NR46 395 aa20.17■□□□□ 0.82
RPL39-202ENST00000468844 SPRYD7Q5W111 196 aa20.17■□□□□ 0.82
RPL39-202ENST00000468844 USP17L15C9J2P7 530 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 USP17L13C9JLJ4 530 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms