RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 DDX11Q96FC9 970 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 WNK4Q96J92 1243 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 C12orf42Q96LP6 360 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 LLPHQ9BRT6 129 aaKnown RBP7.96□□□□□ -1.14
SCAF4-204ENST00000467731 ABT1Q9ULW3 272 aaKnown RBP7.96□□□□□ -1.14
SCAF4-204ENST00000467731 KCNH4Q9UQ05 1017 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 TLL2Q9Y6L7 1015 aa7.96□□□□□ -1.14
SCAF4-204ENST00000467731 hCG_1642624A0A1W2PR95 340 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 CXCL11O14625 94 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 WDR46O15213 610 aaKnown RBP7.95□□□□□ -1.14
SCAF4-204ENST00000467731 CDKL5O76039 1030 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 GJB2P29033 226 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 GNAQP50148 359 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 ZNF157P51786 506 aaPredicted RBP7.95□□□□□ -1.14
SCAF4-204ENST00000467731 IKQ13123 557 aaPredicted RBP7.95□□□□□ -1.14
SCAF4-204ENST00000467731 TPRNQ4KMQ1 711 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 SLC26A6Q9BXS9 759 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 TMOD4Q9NZQ9 345 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 SMC3Q9UQE7 1217 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 COL11A1P12107 1806 aaPredicted RBP7.95□□□□□ -1.14
SCAF4-204ENST00000467731 ZBTB48P10074 688 aaPredicted RBP7.95□□□□□ -1.14
SCAF4-204ENST00000467731 FDPSP14324 419 aaKnown RBP7.95□□□□□ -1.14
SCAF4-204ENST00000467731 SPRYD7Q5W111 196 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 PIBF1Q8WXW3 757 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 LZTS2Q9BRK4 669 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 TANGO6Q9C0B7 1094 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 RPAP3Q9H6T3 665 aaPredicted RBP7.95□□□□□ -1.14
SCAF4-204ENST00000467731 FBXO28Q9NVF7 368 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 HMGN5P82970 282 aaKnown RBP7.95□□□□□ -1.14
SCAF4-204ENST00000467731 SSRP1Q08945 709 aaKnown RBP7.95□□□□□ -1.14
SCAF4-204ENST00000467731 SNAPC2Q13487 334 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 TREML2Q5T2D2 321 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 RGMBQ6NW40 437 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 GADL1Q6ZQY3 521 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 RASAL3Q86YV0 1011 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 ADGRF4Q8IZF3 695 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 SPZ1Q9BXG8 430 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 RNF26Q9BY78 433 aaPredicted RBP7.95□□□□□ -1.14
SCAF4-204ENST00000467731 RIOX1Q9H6W3 641 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 VAT1LQ9HCJ6 419 aa7.95□□□□□ -1.14
SCAF4-204ENST00000467731 CENPFP49454 3210 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 FMNL1O95466 1100 aaPredicted RBP7.94□□□□□ -1.14
SCAF4-204ENST00000467731 MOGSQ13724 837 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 HOMER1Q86YM7 354 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 TRIM22Q8IYM9 498 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 PROCA1Q8NCQ7 364 aaPredicted RBP7.94□□□□□ -1.14
SCAF4-204ENST00000467731 MS4A4AQ96JQ5 239 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 ORC3Q9UBD5 711 aaPredicted RBP7.94□□□□□ -1.14
SCAF4-204ENST00000467731 V9GY48 417 aaPredicted RBP7.94□□□□□ -1.14
SCAF4-204ENST00000467731 FLOT1O75955 427 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 SMARCA1P28370 1054 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 APLP1P51693 650 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 SYDE2Q5VT97 1194 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 BTNL9Q6UXG8 535 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 CNPY4Q8N129 248 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 FAM184AQ8NB25 1140 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 KIFC2Q96AC6 838 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 AIFM3Q96NN9 605 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 PIGSQ96S52 555 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 JMJD4Q9H9V9 463 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 FEM1BQ9UK73 627 aa7.94□□□□□ -1.14
SCAF4-204ENST00000467731 STK36Q9NRP7 1315 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 PRPF3O43395 683 aaKnown RBP7.93□□□□□ -1.14
SCAF4-204ENST00000467731 PLA2G6O60733 806 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 DEXIO95424 95 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 KCNA4P22459 653 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 GTF2A2P52657 109 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 AKAP17AQ02040 695 aaKnown RBP7.93□□□□□ -1.14
SCAF4-204ENST00000467731 PKN1Q16512 942 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 CHURC1Q8WUH1 139 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 CREBZFQ9NS37 354 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 PRR12Q9ULL5 1215 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 CCL15-CCL14A0A0B4J2E2 113 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 SLC10A3P09131 477 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 SNAP25P60880 206 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 CCL15Q16663 113 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 CATSPERGQ6ZRH7 1159 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 FASTKD5Q7L8L6 764 aaKnown RBP7.93□□□□□ -1.14
SCAF4-204ENST00000467731 FAM160B2Q86V87 743 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 PRPF38AQ8NAV1 312 aaKnown RBP7.93□□□□□ -1.14
SCAF4-204ENST00000467731 RRP36Q96EU6 259 aaKnown RBP7.93□□□□□ -1.14
SCAF4-204ENST00000467731 HHIPL1Q96JK4 782 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 ZNF830Q96NB3 372 aaPredicted RBP7.93□□□□□ -1.14
SCAF4-204ENST00000467731 SLF1Q9BQI6 1058 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 AGTPBP1Q9UPW5 1226 aa7.93□□□□□ -1.14
SCAF4-204ENST00000467731 FAM155AB1AL88 458 aaPredicted RBP7.92□□□□□ -1.14
SCAF4-204ENST00000467731 USP17L15C9J2P7 530 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 USP17L13C9JLJ4 530 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 USP17L11C9JVI0 530 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 USP17L18D6R9N7 530 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 USP17L22D6RA61 530 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 USP17L17D6RBQ6 530 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 USP17L19D6RCP7 530 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 USP17L20D6RJB6 530 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 CETPP11597 493 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 USP17L24Q0WX57 530 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 GRM1Q13255 1194 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 BRI3BPQ8WY22 251 aa7.92□□□□□ -1.14
SCAF4-204ENST00000467731 GPKOWQ92917 476 aaPredicted RBP eCLIP7.92□□□□□ -1.142e-6■■■□□ 15.9
SCAF4-204ENST00000467731 MTMR8Q96EF0 704 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms