RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 SLC9A7Q96T83 725 aa8.17□□□□□ -1.1
ATG3-204ENST00000467275 GFOD1Q9NXC2 390 aa8.17□□□□□ -1.1
ATG3-204ENST00000467275 MYOCOSA0A1B0GUC4 107 aa8.16□□□□□ -1.1
ATG3-204ENST00000467275 FAM86C2PA6NEL3 165 aa8.16□□□□□ -1.1
ATG3-204ENST00000467275 NRDCO43847 1150 aa8.16□□□□□ -1.1
ATG3-204ENST00000467275 SEMA7AO75326 666 aa8.16□□□□□ -1.1
ATG3-204ENST00000467275 IMPDH2P12268 514 aa8.16□□□□□ -1.1
ATG3-204ENST00000467275 LINC00310P59036 64 aa8.16□□□□□ -1.1
ATG3-204ENST00000467275 DLG4P78352 724 aa8.16□□□□□ -1.1
ATG3-204ENST00000467275 HHIPL1Q96JK4 782 aa8.16□□□□□ -1.1
ATG3-204ENST00000467275 NUAK1O60285 661 aa8.15□□□□□ -1.1
ATG3-204ENST00000467275 RTP1P59025 263 aa8.15□□□□□ -1.1
ATG3-204ENST00000467275 AUHQ13825 339 aaKnown RBP8.15□□□□□ -1.1
ATG3-204ENST00000467275 FERD3LQ96RJ6 166 aa8.15□□□□□ -1.1
ATG3-204ENST00000467275 ZNRF3Q9ULT6 936 aa8.15□□□□□ -1.1
ATG3-204ENST00000467275 TEX51A0A1B0GUA7 166 aa8.14□□□□□ -1.11
ATG3-204ENST00000467275 ENDOUP21128 410 aaKnown RBP8.14□□□□□ -1.11
ATG3-204ENST00000467275 FANCCQ00597 558 aa8.14□□□□□ -1.11
ATG3-204ENST00000467275 ZNF394Q53GI3 561 aa8.14□□□□□ -1.11
ATG3-204ENST00000467275 FBXW10Q5XX13 1052 aa8.14□□□□□ -1.11
ATG3-204ENST00000467275 INTS3Q68E01 1043 aaKnown RBP8.14□□□□□ -1.11
ATG3-204ENST00000467275 CCDC144CPQ8IYA2 1237 aa8.14□□□□□ -1.11
ATG3-204ENST00000467275 FCRL2Q96LA5 508 aaPredicted RBP8.14□□□□□ -1.11
ATG3-204ENST00000467275 CDADC1Q9BWV3 514 aa8.14□□□□□ -1.11
ATG3-204ENST00000467275 CRTAC1Q9NQ79 661 aa8.14□□□□□ -1.11
ATG3-204ENST00000467275 METTL5Q9NRN9 209 aaKnown RBP8.14□□□□□ -1.11
ATG3-204ENST00000467275 TNFRSF10DQ9UBN6 386 aa8.14□□□□□ -1.11
ATG3-204ENST00000467275 SUCOQ9UBS9 1254 aaKnown RBP8.14□□□□□ -1.11
ATG3-204ENST00000467275 PCDHGB7Q9Y5F8 929 aa8.14□□□□□ -1.11
ATG3-204ENST00000467275 EFEMP2O95967 443 aa8.13□□□□□ -1.11
ATG3-204ENST00000467275 BMP8BP34820 402 aa8.13□□□□□ -1.11
ATG3-204ENST00000467275 AMIGO3Q86WK7 504 aa8.13□□□□□ -1.11
ATG3-204ENST00000467275 RNF34Q969K3 372 aa8.13□□□□□ -1.11
ATG3-204ENST00000467275 DSCC1Q9BVC3 393 aa8.13□□□□□ -1.11
ATG3-204ENST00000467275 SGPP1Q9BX95 441 aa8.13□□□□□ -1.11
ATG3-204ENST00000467275 ACRP10323 421 aa8.12□□□□□ -1.11
ATG3-204ENST00000467275 MFAP1P55081 439 aaKnown RBP8.12□□□□□ -1.11
ATG3-204ENST00000467275 GALNT18Q6P9A2 607 aa8.12□□□□□ -1.11
ATG3-204ENST00000467275 C7orf61Q8IZ16 206 aa8.12□□□□□ -1.11
ATG3-204ENST00000467275 IRF2BPLQ9H1B7 796 aa8.12□□□□□ -1.11
ATG3-204ENST00000467275 PRR13Q9NZ81 148 aa8.12□□□□□ -1.11
ATG3-204ENST00000467275 TAF6LQ9Y6J9 622 aa8.12□□□□□ -1.11
ATG3-204ENST00000467275 FADS2P1A8MWK0 482 aa8.11□□□□□ -1.11
ATG3-204ENST00000467275 PNLIPP16233 465 aa8.11□□□□□ -1.11
ATG3-204ENST00000467275 CTSKP43235 329 aa8.11□□□□□ -1.11
ATG3-204ENST00000467275 SRSF3P84103 164 aaKnown RBP8.11□□□□□ -1.11
ATG3-204ENST00000467275 CRTC3Q6UUV7 619 aa8.11□□□□□ -1.11
ATG3-204ENST00000467275 CNOT6Q9ULM6 557 aaKnown RBP8.11□□□□□ -1.11
ATG3-204ENST00000467275 GPR55Q9Y2T6 319 aaPredicted RBP8.11□□□□□ -1.11
ATG3-204ENST00000467275 WTIPA6NIX2 430 aaPredicted RBP8.1□□□□□ -1.11
ATG3-204ENST00000467275 C9IYK1 514 aa8.1□□□□□ -1.11
ATG3-204ENST00000467275 ZNF205O95201 554 aa8.1□□□□□ -1.11
ATG3-204ENST00000467275 GSNP06396 782 aa8.1□□□□□ -1.11
ATG3-204ENST00000467275 VAV1P15498 845 aa8.1□□□□□ -1.11
ATG3-204ENST00000467275 SDHBP21912 280 aa8.1□□□□□ -1.11
ATG3-204ENST00000467275 PMS1P54277 932 aaKnown RBP8.1□□□□□ -1.11
ATG3-204ENST00000467275 HSF5Q4G112 596 aaPredicted RBP8.1□□□□□ -1.11
ATG3-204ENST00000467275 LCE4AQ5TA78 99 aa8.1□□□□□ -1.11
ATG3-204ENST00000467275 TDRD10Q5VZ19 366 aaKnown RBP8.1□□□□□ -1.11
ATG3-204ENST00000467275 TM9SF2Q99805 663 aa8.1□□□□□ -1.11
ATG3-204ENST00000467275 PLCD4Q9BRC7 762 aa8.1□□□□□ -1.11
ATG3-204ENST00000467275 ERVK13-1Q9NX77 482 aa8.1□□□□□ -1.11
ATG3-204ENST00000467275 SIRT5Q9NXA8 310 aa8.1□□□□□ -1.11
ATG3-204ENST00000467275 ARL4AP40617 200 aa8.09□□□□□ -1.11
ATG3-204ENST00000467275 NOL9Q5SY16 702 aaKnown RBP8.09□□□□□ -1.11
ATG3-204ENST00000467275 CWF19L1Q69YN2 538 aaKnown RBP8.09□□□□□ -1.11
ATG3-204ENST00000467275 TAB3Q8N5C8 712 aaPredicted RBP8.09□□□□□ -1.11
ATG3-204ENST00000467275 SMARCC1Q92922 1105 aaPredicted RBP8.09□□□□□ -1.11
ATG3-204ENST00000467275 GCM1Q9NP62 436 aa8.09□□□□□ -1.11
ATG3-204ENST00000467275 AP5S1Q9NUS5 200 aa8.09□□□□□ -1.11
ATG3-204ENST00000467275 PPT2Q9UMR5 302 aa8.09□□□□□ -1.11
ATG3-204ENST00000467275 HRKO00198 91 aa8.08□□□□□ -1.12
ATG3-204ENST00000467275 ZNF385BQ569K4 471 aa8.08□□□□□ -1.12
ATG3-204ENST00000467275 OLFML2BQ68BL8 750 aa8.08□□□□□ -1.12
ATG3-204ENST00000467275 A0A1W2PQ45 241 aaPredicted RBP8.07□□□□□ -1.12
ATG3-204ENST00000467275 A0A1W2PQY0 241 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 RFXAPO00287 272 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 ABLIM1O14639 778 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 SHOXO15266 292 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 TP53P04637 393 aaPredicted RBP8.07□□□□□ -1.12
ATG3-204ENST00000467275 MPOP05164 745 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 GSTM1P09488 218 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 PRKCAP17252 672 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 RACK1P63244 317 aaKnown RBP8.07□□□□□ -1.12
ATG3-204ENST00000467275 LAPTM5Q13571 262 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 KIR3DS1Q14943 382 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 DCAF15Q66K64 600 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 SLCO6A1Q86UG4 719 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 NAT16Q8N8M0 369 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 KRTAP4-7Q9BYR0 210 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 FAM86C1Q9NVL1 165 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 MBD1Q9UIS9 605 aaPredicted RBP8.07□□□□□ -1.12
ATG3-204ENST00000467275 DDX41Q9UJV9 622 aaKnown RBP8.07□□□□□ -1.12
ATG3-204ENST00000467275 KCTD3Q9Y597 815 aa8.07□□□□□ -1.12
ATG3-204ENST00000467275 SCAMP3O14828 347 aaKnown RBP8.06□□□□□ -1.12
ATG3-204ENST00000467275 GUCY2CP25092 1073 aa8.06□□□□□ -1.12
ATG3-204ENST00000467275 VIPR1P32241 457 aa8.06□□□□□ -1.12
ATG3-204ENST00000467275 ERVFRD-1P60508 538 aa8.06□□□□□ -1.12
ATG3-204ENST00000467275 CYP4F8P98187 520 aa8.06□□□□□ -1.12
ATG3-204ENST00000467275 ZYXQ15942 572 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms