RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 ZKSCAN3Q9BRR0 538 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 ASCC2Q9H1I8 757 aaPredicted RBP11.58□□□□□ -0.56
PMF1-204ENST00000466489 USP25Q9UHP3 1055 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 ZKSCAN5Q9Y2L8 839 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 MYPNQ86TC9 1320 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 WDR19Q8NEZ3 1342 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 PRC1O43663 620 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 FKTNO75072 461 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 TBC1D8O95759 1140 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 NDUFB10O96000 172 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 PTMAP06454 111 aaKnown RBP11.57□□□□□ -0.56
PMF1-204ENST00000466489 CYP2C8P10632 490 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 BMP3P12645 472 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 HERVK_113P62684 666 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 CCNA1P78396 465 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 RCSD1Q6JBY9 416 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 BLOC1S2Q6QNY1 142 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 SYNE3Q6ZMZ3 975 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 NFXL1Q6ZNB6 911 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 CATSPERGQ6ZRH7 1159 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 SIAH1Q8IUQ4 282 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 MB21D2Q8IYB1 491 aaPredicted RBP11.57□□□□□ -0.56
PMF1-204ENST00000466489 MB21D1Q8N884 522 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 ENAHQ8N8S7 591 aaPredicted RBP11.57□□□□□ -0.56
PMF1-204ENST00000466489 PNMA1Q8ND90 353 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 CHURC1Q8WUH1 139 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 DCAF4Q8WV16 495 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 UBE2Q2Q8WVN8 375 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 ERO1AQ96HE7 468 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 GMCL1Q96IK5 515 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 PRIMPOLQ96LW4 560 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 JAKMIP1Q96N16 626 aaKnown RBP11.57□□□□□ -0.56
PMF1-204ENST00000466489 TMEM47Q9BQJ4 181 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 PANK2Q9BZ23 570 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 MTMR7Q9Y216 660 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 TACC3Q9Y6A5 838 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 PARP14Q460N5 1801 aa11.57□□□□□ -0.56
PMF1-204ENST00000466489 CASP8AP2Q9UKL3 1982 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 CCDC69A6NI79 296 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 GPR25O00155 361 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 DYNC1I1O14576 645 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 FOXN1O15353 648 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 STX6O43752 255 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 FDX1P10109 184 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 NOVP48745 357 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 STAT2P52630 851 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 SP3Q02447 781 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 DGKZQ13574 1117 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 FAM110CQ1W6H9 321 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 FAM83BQ5T0W9 1011 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 GPATCH4Q5T3I0 446 aaKnown RBP11.56□□□□□ -0.56
PMF1-204ENST00000466489 SAMD1Q6SPF0 538 aaPredicted RBP11.56□□□□□ -0.56
PMF1-204ENST00000466489 STOX1Q6ZVD7 989 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 DHX32Q7L7V1 743 aaKnown RBP11.56□□□□□ -0.56
PMF1-204ENST00000466489 CATIPQ7Z7H3 387 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 FAM160B2Q86V87 743 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 ANKS1AQ92625 1134 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 SLF1Q9BQI6 1058 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 TSKSQ9UJT2 592 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 FEM1BQ9UK73 627 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 ELP1O95163 1332 aa11.56□□□□□ -0.56
PMF1-204ENST00000466489 MGAMO43451 1857 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 MYH6P13533 1939 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 GOLGA6L4A6NEF3 574 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 HSPA8P11142 646 aaKnown RBP11.55□□□□□ -0.56
PMF1-204ENST00000466489 CASTP20810 708 aaKnown RBP11.55□□□□□ -0.56
PMF1-204ENST00000466489 LBX1P52954 281 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 ASPRV1Q53RT3 343 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 CYB5R4Q7L1T6 521 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 GAS2L3Q86XJ1 694 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 PRPF38AQ8NAV1 312 aaKnown RBP11.55□□□□□ -0.56
PMF1-204ENST00000466489 PAGR1Q9BTK6 254 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 CPA4Q9UI42 421 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 PNMA2Q9UL42 364 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 RABGAP1Q9Y3P9 1069 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 SNX14Q9Y5W7 946 aa11.55□□□□□ -0.56
PMF1-204ENST00000466489 PCNTO95613 3336 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 COL11A1P12107 1806 aaPredicted RBP11.54□□□□□ -0.56
PMF1-204ENST00000466489 TMEM232C9JQI7 657 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 ZBED4O75132 1171 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 GNRH1P01148 92 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 PARP1P09874 1014 aaKnown RBP11.54□□□□□ -0.56
PMF1-204ENST00000466489 CCDC192P0DO97 292 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 CALM1P0DP23 149 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 CALM2P0DP24 149 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 CALM3P0DP25 149 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 KIF5BP33176 963 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 COPB2P35606 906 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 LBX2Q6XYB7 198 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 CHST3Q7LGC8 479 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 RASEFQ8IZ41 740 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 ANKRD13CQ8N6S4 541 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 GPRC5AQ8NFJ5 357 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 NUP88Q99567 741 aaPredicted RBP11.54□□□□□ -0.56
PMF1-204ENST00000466489 P2RX7Q99572 595 aaKnown RBP11.54□□□□□ -0.56
PMF1-204ENST00000466489 PRDM10Q9NQV6 1147 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 PDRG1Q9NUG6 133 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 CFAP45Q9UL16 551 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms