RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 KREMEN1Q96MU8 473 aa7.13□□□□□ -1.27
LRCH3-211ENST00000466054 METTL5Q9NRN9 209 aaKnown RBP7.13□□□□□ -1.27
LRCH3-211ENST00000466054 TAF6LQ9Y6J9 622 aa7.13□□□□□ -1.27
LRCH3-211ENST00000466054 UPK3BL1B0FP48 263 aa7.12□□□□□ -1.27
LRCH3-211ENST00000466054 UPK3BL2E5RIL1 263 aa7.12□□□□□ -1.27
LRCH3-211ENST00000466054 AKAP8O43823 692 aaKnown RBP7.12□□□□□ -1.27
LRCH3-211ENST00000466054 PRICKLE3O43900 615 aaPredicted RBP7.12□□□□□ -1.27
LRCH3-211ENST00000466054 PCBP3P57721 371 aaKnown RBP7.12□□□□□ -1.27
LRCH3-211ENST00000466054 RTP1P59025 263 aa7.12□□□□□ -1.27
LRCH3-211ENST00000466054 RPL6Q02878 288 aaKnown RBP7.12□□□□□ -1.27
LRCH3-211ENST00000466054 RAB3GAP1Q15042 981 aa7.12□□□□□ -1.27
LRCH3-211ENST00000466054 LDLRAD1Q5T700 205 aa7.12□□□□□ -1.27
LRCH3-211ENST00000466054 NOC4LQ9BVI4 516 aaKnown RBP7.12□□□□□ -1.27
LRCH3-211ENST00000466054 CNOT11Q9UKZ1 510 aaKnown RBP7.12□□□□□ -1.27
LRCH3-211ENST00000466054 SCAMP3O14828 347 aaKnown RBP7.11□□□□□ -1.27
LRCH3-211ENST00000466054 GRIN3BO60391 1043 aa7.11□□□□□ -1.27
LRCH3-211ENST00000466054 BUB1BO60566 1050 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-211ENST00000466054 EFEMP2O95967 443 aa7.11□□□□□ -1.27
LRCH3-211ENST00000466054 ZXDAP98168 799 aa7.11□□□□□ -1.27
LRCH3-211ENST00000466054 NMIQ13287 307 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-211ENST00000466054 MEI1Q5TIA1 1274 aa7.11□□□□□ -1.27
LRCH3-211ENST00000466054 IGDCC3Q8IVU1 814 aa7.11□□□□□ -1.27
LRCH3-211ENST00000466054 FOXP3Q9BZS1 431 aa7.11□□□□□ -1.27
LRCH3-211ENST00000466054 FKTNO75072 461 aa7.1□□□□□ -1.27
LRCH3-211ENST00000466054 BPNT1O95861 308 aa7.1□□□□□ -1.27
LRCH3-211ENST00000466054 RLBP1P12271 317 aa7.1□□□□□ -1.27
LRCH3-211ENST00000466054 LIG3P49916 1009 aa7.1□□□□□ -1.27
LRCH3-211ENST00000466054 ERVFRD-1P60508 538 aa7.1□□□□□ -1.27
LRCH3-211ENST00000466054 GALNT18Q6P9A2 607 aa7.1□□□□□ -1.27
LRCH3-211ENST00000466054 AGMOQ6ZNB7 445 aa7.1□□□□□ -1.27
LRCH3-211ENST00000466054 ENOX1Q8TC92 643 aaKnown RBP7.1□□□□□ -1.27
LRCH3-211ENST00000466054 TCFL5Q9UL49 500 aa7.1□□□□□ -1.27
LRCH3-211ENST00000466054 CORINQ9Y5Q5 1042 aa7.1□□□□□ -1.27
LRCH3-211ENST00000466054 ADAMTS20P59510 1910 aa7.09□□□□□ -1.27
LRCH3-211ENST00000466054 NUDT19A8MXV4 375 aa7.09□□□□□ -1.27
LRCH3-211ENST00000466054 PFKLP17858 780 aa7.09□□□□□ -1.27
LRCH3-211ENST00000466054 SLURP1P55000 103 aa7.09□□□□□ -1.27
LRCH3-211ENST00000466054 NCKAP1LP55160 1127 aa7.09□□□□□ -1.27
LRCH3-211ENST00000466054 PHACTR4Q8IZ21 702 aa7.09□□□□□ -1.27
LRCH3-211ENST00000466054 SYTL5Q8TDW5 730 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-211ENST00000466054 HHIPL1Q96JK4 782 aa7.09□□□□□ -1.27
LRCH3-211ENST00000466054 KLHL3Q9UH77 587 aa7.09□□□□□ -1.27
LRCH3-211ENST00000466054 ZNF76P36508 570 aa7.08□□□□□ -1.28
LRCH3-211ENST00000466054 LAPTM5Q13571 262 aa7.08□□□□□ -1.28
LRCH3-211ENST00000466054 TP53I13Q8NBR0 393 aaPredicted RBP7.08□□□□□ -1.28
LRCH3-211ENST00000466054 CCDC74BQ96LY2 380 aa7.08□□□□□ -1.28
LRCH3-211ENST00000466054 KLHL14Q9P2G3 628 aa7.08□□□□□ -1.28
LRCH3-211ENST00000466054 ZNF281Q9Y2X9 895 aa7.08□□□□□ -1.28
LRCH3-211ENST00000466054 TCF3P15923 654 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 GBP1P32455 592 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 FANCCQ00597 558 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 ZFYVE27Q5T4F4 411 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 HS2ST1Q7LGA3 356 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 SLFN12Q8IYM2 578 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 USHBP1Q8N6Y0 703 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 RNF34Q969K3 372 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 PLCD4Q9BRC7 762 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 RSRP1Q9BUV0 290 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 IGSF5Q9NSI5 407 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 PCDHA5Q9Y5H7 936 aa7.07□□□□□ -1.28
LRCH3-211ENST00000466054 WTIPA6NIX2 430 aaPredicted RBP7.06□□□□□ -1.28
LRCH3-211ENST00000466054 FSHBP01225 129 aa7.06□□□□□ -1.28
LRCH3-211ENST00000466054 SYPP08247 313 aa7.06□□□□□ -1.28
LRCH3-211ENST00000466054 MAGEA10P43363 369 aaPredicted RBP7.06□□□□□ -1.28
LRCH3-211ENST00000466054 PWP1Q13610 501 aa7.06□□□□□ -1.28
LRCH3-211ENST00000466054 NT5DC1Q5TFE4 455 aa7.06□□□□□ -1.28
LRCH3-211ENST00000466054 ZNF655Q8N720 491 aaPredicted RBP7.06□□□□□ -1.28
LRCH3-211ENST00000466054 DAGLBQ8NCG7 672 aa7.06□□□□□ -1.28
LRCH3-211ENST00000466054 VWCEQ96DN2 955 aa7.06□□□□□ -1.28
LRCH3-211ENST00000466054 HDAC8Q9BY41 377 aa7.06□□□□□ -1.28
LRCH3-211ENST00000466054 FFAR3O14843 346 aa7.05□□□□□ -1.28
LRCH3-211ENST00000466054 TNFRSF1AP19438 455 aa7.05□□□□□ -1.28
LRCH3-211ENST00000466054 LIMS1P48059 325 aa7.05□□□□□ -1.28
LRCH3-211ENST00000466054 RNF4P78317 190 aa7.05□□□□□ -1.28
LRCH3-211ENST00000466054 CYP4F8P98187 520 aa7.05□□□□□ -1.28
LRCH3-211ENST00000466054 ERMP1Q7Z2K6 904 aa7.05□□□□□ -1.28
LRCH3-211ENST00000466054 FERMT3Q86UX7 667 aa7.05□□□□□ -1.28
LRCH3-211ENST00000466054 LSRQ86X29 649 aaPredicted RBP7.05□□□□□ -1.28
LRCH3-211ENST00000466054 TCTN2Q96GX1 697 aa7.05□□□□□ -1.28
LRCH3-211ENST00000466054 TNFRSF10DQ9UBN6 386 aa7.05□□□□□ -1.28
LRCH3-211ENST00000466054 PRKCAP17252 672 aa7.04□□□□□ -1.28
LRCH3-211ENST00000466054 TFE3P19532 575 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-211ENST00000466054 TMEM201Q5SNT2 666 aa7.04□□□□□ -1.28
LRCH3-211ENST00000466054 RELL1Q8IUW5 271 aa7.04□□□□□ -1.28
LRCH3-211ENST00000466054 NUP43Q8NFH3 380 aa7.04□□□□□ -1.28
LRCH3-211ENST00000466054 SMPD4Q9NXE4 827 aa7.04□□□□□ -1.28
LRCH3-211ENST00000466054 SUSD2Q9UGT4 822 aa7.04□□□□□ -1.28
LRCH3-211ENST00000466054 GPR55Q9Y2T6 319 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-211ENST00000466054 TMEM82A0PJX8 343 aa7.03□□□□□ -1.28
LRCH3-211ENST00000466054 HDLBPQ00341 1268 aaKnown RBP7.03□□□□□ -1.28
LRCH3-211ENST00000466054 TARBP2Q15633 366 aaKnown RBP7.03□□□□□ -1.28
LRCH3-211ENST00000466054 HSF5Q4G112 596 aaPredicted RBP7.03□□□□□ -1.28
LRCH3-211ENST00000466054 METTL16Q86W50 562 aaKnown RBP7.03□□□□□ -1.28
LRCH3-211ENST00000466054 SLC16A11Q8NCK7 471 aa7.03□□□□□ -1.28
LRCH3-211ENST00000466054 LINC00116Q8NCU8 138 aa7.03□□□□□ -1.28
LRCH3-211ENST00000466054 FCRL2Q96LA5 508 aaPredicted RBP7.03□□□□□ -1.28
LRCH3-211ENST00000466054 GGT7Q9UJ14 662 aa7.03□□□□□ -1.28
LRCH3-211ENST00000466054 A0A1W2PQ27 194 aa7.02□□□□□ -1.29
LRCH3-211ENST00000466054 A0A1W2PQ64 194 aa7.02□□□□□ -1.29
LRCH3-211ENST00000466054 A0A1W2PQC6 194 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms