RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 PLXNA1Q9UIW2 1896 aa12.4□□□□□ -0.42
GPNMB-206ENST00000465673 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.4□□□□□ -0.42
GPNMB-206ENST00000465673 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.4□□□□□ -0.42
GPNMB-206ENST00000465673 ACRP10323 421 aa12.4□□□□□ -0.42
GPNMB-206ENST00000465673 SNRNP48Q6IEG0 339 aaKnown RBP12.4□□□□□ -0.42
GPNMB-206ENST00000465673 CCSAPQ6IQ19 270 aaPredicted RBP12.4□□□□□ -0.42
GPNMB-206ENST00000465673 ANKRD33Q7Z3H0 272 aa12.4□□□□□ -0.42
GPNMB-206ENST00000465673 CPXCR1Q8N123 301 aa12.4□□□□□ -0.42
GPNMB-206ENST00000465673 PPM1EQ8WY54 764 aa12.4□□□□□ -0.42
GPNMB-206ENST00000465673 DDX11Q96FC9 970 aa12.4□□□□□ -0.42
GPNMB-206ENST00000465673 HAUS7Q99871 368 aa12.4□□□□□ -0.42
GPNMB-206ENST00000465673 ZNF576Q9H609 170 aa12.4□□□□□ -0.42
GPNMB-206ENST00000465673 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
GPNMB-206ENST00000465673 CNPY2Q9Y2B0 182 aa12.4□□□□□ -0.42
GPNMB-206ENST00000465673 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 DNAJC25-GNG10A0A024R161 153 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 DCDC2CA8MYV0 355 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 F5H6K3 240 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 NDUFB10O96000 172 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 TIMP1P01033 207 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 ATP5JP18859 108 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 PTGS1P23219 599 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 KLRC3Q07444 240 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 TIFAQ96CG3 184 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 FGD4Q96M96 766 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 SLF1Q9BQI6 1058 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 TSEN34Q9BSV6 310 aaKnown RBP12.39□□□□□ -0.43
GPNMB-206ENST00000465673 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.39□□□□□ -0.43
GPNMB-206ENST00000465673 RAVER2Q9HCJ3 691 aaKnown RBP12.39□□□□□ -0.43
GPNMB-206ENST00000465673 TBX21Q9UL17 535 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 FAM184BQ9ULE4 1060 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
GPNMB-206ENST00000465673 SMARCA5O60264 1052 aaPredicted RBP12.38□□□□□ -0.43
GPNMB-206ENST00000465673 ASGR1P07306 291 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 C6orf222P0C671 652 aaPredicted RBP12.38□□□□□ -0.43
GPNMB-206ENST00000465673 CSF2RAP15509 400 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 RASA1P20936 1047 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 CDK7P50613 346 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 ACVR2BQ13705 512 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 UBE3CQ15386 1083 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 TMEM240Q5SV17 173 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 AMOTL1Q8IY63 956 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 NUP133Q8WUM0 1156 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 KIFC2Q96AC6 838 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 VTI1AQ96AJ9 217 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 CHMP4CQ96CF2 233 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 TOX2Q96NM4 488 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 TEX13BQ9BXU2 312 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 PPP1R12CQ9BZL4 782 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 DDX49Q9Y6V7 483 aaKnown RBP12.38□□□□□ -0.43
GPNMB-206ENST00000465673 ROBO3Q96MS0 1386 aa12.38□□□□□ -0.43
GPNMB-206ENST00000465673 TMEM265A0A087WTH1 108 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 MINDY4BA8MYZ0 360 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 CCDC144BQ3MJ40 725 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 MFSD5Q6N075 450 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 MAMDC4Q6UXC1 1216 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 RPAP2Q8IXW5 612 aaPredicted RBP12.37□□□□□ -0.43
GPNMB-206ENST00000465673 DDRGK1Q96HY6 314 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 STRBPQ96SI9 672 aaKnown RBP12.37□□□□□ -0.43
GPNMB-206ENST00000465673 PBX4Q9BYU1 374 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 PRDM12Q9H4Q4 367 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 ZBTB40Q9NUA8 1239 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.37□□□□□ -0.43
GPNMB-206ENST00000465673 CLIP2Q9UDT6 1046 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 RAPGEFL1Q9UHV5 662 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 SYNGAP1Q96PV0 1343 aa12.37□□□□□ -0.43
GPNMB-206ENST00000465673 MOXD2PA6NHM9 499 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 GSG1L2A8MUP6 293 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 CTAGE5O15320 804 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 RAB11FIP3O75154 756 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 DUSP11O75319 330 aaKnown RBP12.36□□□□□ -0.43
GPNMB-206ENST00000465673 HMMRO75330 724 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 PRDM1O75626 825 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 CYP2C18P33260 490 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 COPB2P35606 906 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 BEX3Q00994 111 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 CNTN2Q02246 1040 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 CCDC85BQ15834 202 aaPredicted RBP12.36□□□□□ -0.43
GPNMB-206ENST00000465673 TJAP1Q5JTD0 557 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 GNASQ5JWF2 1037 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 ZNF365Q70YC5 407 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 LRRC47Q8N1G4 583 aaKnown RBP12.36□□□□□ -0.43
GPNMB-206ENST00000465673 PRPF38AQ8NAV1 312 aaKnown RBP12.36□□□□□ -0.43
GPNMB-206ENST00000465673 GLT1D1Q96MS3 346 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 MKNK2Q9HBH9 465 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 NYAP2Q9P242 653 aa12.36□□□□□ -0.43
GPNMB-206ENST00000465673 MYO9BQ13459 2157 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.35□□□□□ -0.43
GPNMB-206ENST00000465673 ARVCFO00192 962 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 ADGRE1Q14246 886 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 RASIP1Q5U651 963 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 TSHZ3Q63HK5 1081 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 ARMCX2Q7L311 632 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 FAM126BQ8IXS8 530 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 CCDC144CPQ8IYA2 1237 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 ANKRD35Q8N283 1001 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 MSL3Q8N5Y2 521 aaKnown RBP12.35□□□□□ -0.43
GPNMB-206ENST00000465673 SYMPKQ92797 1274 aaKnown RBP12.35□□□□□ -0.43
GPNMB-206ENST00000465673 OSBP2Q969R2 916 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms