RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 ADGRF4Q8IZF3 695 aa19.95■□□□□ 0.78
PTPRU-206ENST00000465525 LZTS2Q9BRK4 669 aa19.95■□□□□ 0.78
PTPRU-206ENST00000465525 TANGO6Q9C0B7 1094 aa19.95■□□□□ 0.78
PTPRU-206ENST00000465525 FBXO28Q9NVF7 368 aa19.95■□□□□ 0.78
PTPRU-206ENST00000465525 A0A0G2JLL6 359 aaPredicted RBP19.94■□□□□ 0.78
PTPRU-206ENST00000465525 DDIT3P35638 169 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 AKAP17AQ02040 695 aaKnown RBP19.94■□□□□ 0.78
PTPRU-206ENST00000465525 PKP1Q13835 747 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 GADL1Q6ZQY3 521 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 PAXIP1Q6ZW49 1069 aaPredicted RBP19.94■□□□□ 0.78
PTPRU-206ENST00000465525 PRRT2Q7Z6L0 340 aaPredicted RBP19.94■□□□□ 0.78
PTPRU-206ENST00000465525 LPAR1Q92633 364 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 PIGSQ96S52 555 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 SPZ1Q9BXG8 430 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 RNF26Q9BY78 433 aaPredicted RBP19.94■□□□□ 0.78
PTPRU-206ENST00000465525 RPAP3Q9H6T3 665 aaPredicted RBP19.94■□□□□ 0.78
PTPRU-206ENST00000465525 CWC22Q9HCG8 908 aaKnown RBP19.94■□□□□ 0.78
PTPRU-206ENST00000465525 TMOD4Q9NZQ9 345 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 STK36Q9NRP7 1315 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 FAM155AB1AL88 458 aaPredicted RBP19.94■□□□□ 0.78
PTPRU-206ENST00000465525 WDR46O15213 610 aaKnown RBP19.94■□□□□ 0.78
PTPRU-206ENST00000465525 PRPF3O43395 683 aaKnown RBP19.94■□□□□ 0.78
PTPRU-206ENST00000465525 PKN1Q16512 942 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 C12orf42Q96LP6 360 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 ALG1Q9BT22 464 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 JMJD4Q9H9V9 463 aa19.94■□□□□ 0.78
PTPRU-206ENST00000465525 CETPP11597 493 aa19.93■□□□□ 0.78
PTPRU-206ENST00000465525 HSPA6P17066 643 aa19.93■□□□□ 0.78
PTPRU-206ENST00000465525 GUCY1B3Q02153 619 aa19.93■□□□□ 0.78
PTPRU-206ENST00000465525 SYDE2Q5VT97 1194 aa19.93■□□□□ 0.78
PTPRU-206ENST00000465525 FOXD4L5Q5VV16 416 aaPredicted RBP19.93■□□□□ 0.78
PTPRU-206ENST00000465525 LARP1BQ659C4 914 aaKnown RBP19.93■□□□□ 0.78
PTPRU-206ENST00000465525 OTUD7BQ6GQQ9 843 aa19.93■□□□□ 0.78
PTPRU-206ENST00000465525 CYP4F22Q6NT55 531 aa19.93■□□□□ 0.78
PTPRU-206ENST00000465525 FASTKD5Q7L8L6 764 aaKnown RBP19.93■□□□□ 0.78
PTPRU-206ENST00000465525 FOXD4L4Q8WXT5 416 aaPredicted RBP19.93■□□□□ 0.78
PTPRU-206ENST00000465525 KIFC2Q96AC6 838 aa19.93■□□□□ 0.78
PTPRU-206ENST00000465525 MS4A4AQ96JQ5 239 aa19.93■□□□□ 0.78
PTPRU-206ENST00000465525 RIOX1Q9H6W3 641 aa19.93■□□□□ 0.78
PTPRU-206ENST00000465525 DEXIO95424 95 aa19.92■□□□□ 0.78
PTPRU-206ENST00000465525 SYT1P21579 422 aa19.92■□□□□ 0.78
PTPRU-206ENST00000465525 STAT2P52630 851 aa19.92■□□□□ 0.78
PTPRU-206ENST00000465525 TREML2Q5T2D2 321 aa19.92■□□□□ 0.78
PTPRU-206ENST00000465525 PROCA1Q8NCQ7 364 aaPredicted RBP19.92■□□□□ 0.78
PTPRU-206ENST00000465525 GPKOWQ92917 476 aaPredicted RBP eCLIP19.92■□□□□ 0.78
PTPRU-206ENST00000465525 RRP36Q96EU6 259 aaKnown RBP19.92■□□□□ 0.78
PTPRU-206ENST00000465525 RLFQ13129 1914 aa19.91■□□□□ 0.78
PTPRU-206ENST00000465525 CAPNS2Q96L46 248 aa19.91■□□□□ 0.78
PTPRU-206ENST00000465525 PRR12Q9ULL5 1215 aa19.91■□□□□ 0.78
PTPRU-206ENST00000465525 VPS37CA5D8V6 355 aaPredicted RBP19.91■□□□□ 0.78
PTPRU-206ENST00000465525 MANSC4A6NHS7 340 aaPredicted RBP19.91■□□□□ 0.78
PTPRU-206ENST00000465525 FLOT1O75955 427 aa19.91■□□□□ 0.78
PTPRU-206ENST00000465525 INHBEP58166 350 aa19.91■□□□□ 0.78
PTPRU-206ENST00000465525 BTNL9Q6UXG8 535 aa19.91■□□□□ 0.78
PTPRU-206ENST00000465525 FEM1BQ9UK73 627 aa19.91■□□□□ 0.78
PTPRU-206ENST00000465525 COL11A1P12107 1806 aaPredicted RBP19.9■□□□□ 0.78
PTPRU-206ENST00000465525 CCL15-CCL14A0A0B4J2E2 113 aa19.9■□□□□ 0.78
PTPRU-206ENST00000465525 SCG2P13521 617 aa19.9■□□□□ 0.78
PTPRU-206ENST00000465525 SMARCA1P28370 1054 aa19.9■□□□□ 0.78
PTPRU-206ENST00000465525 HTRA3P83110 453 aa19.9■□□□□ 0.78
PTPRU-206ENST00000465525 NOGQ13253 232 aa19.9■□□□□ 0.78
PTPRU-206ENST00000465525 GRM1Q13255 1194 aa19.9■□□□□ 0.78
PTPRU-206ENST00000465525 MOGSQ13724 837 aa19.9■□□□□ 0.78
PTPRU-206ENST00000465525 CCL15Q16663 113 aa19.9■□□□□ 0.78
PTPRU-206ENST00000465525 SHISA4Q96DD7 197 aa19.9■□□□□ 0.78
PTPRU-206ENST00000465525 C8orf76Q96K31 380 aa19.9■□□□□ 0.78
PTPRU-206ENST00000465525 VPS54Q9P1Q0 977 aa19.9■□□□□ 0.78
PTPRU-206ENST00000465525 SEC63Q9UGP8 760 aaKnown RBP19.9■□□□□ 0.78
PTPRU-206ENST00000465525 SMCHD1A6NHR9 2005 aa19.89■□□□□ 0.78
PTPRU-206ENST00000465525 TESPA1A2RU30 521 aaPredicted RBP19.89■□□□□ 0.77
PTPRU-206ENST00000465525 TAL1P17542 331 aaPredicted RBP19.89■□□□□ 0.77
PTPRU-206ENST00000465525 CDC37Q16543 378 aaPredicted RBP19.89■□□□□ 0.77
PTPRU-206ENST00000465525 PFKFB3Q16875 520 aaPredicted RBP19.89■□□□□ 0.77
PTPRU-206ENST00000465525 HEATR3Q7Z4Q2 680 aa19.89■□□□□ 0.77
PTPRU-206ENST00000465525 CHURC1Q8WUH1 139 aa19.89■□□□□ 0.77
PTPRU-206ENST00000465525 SLF1Q9BQI6 1058 aa19.89■□□□□ 0.77
PTPRU-206ENST00000465525 KIF3AQ9Y496 699 aa19.89■□□□□ 0.77
PTPRU-206ENST00000465525 STX6O43752 255 aa19.88■□□□□ 0.77
PTPRU-206ENST00000465525 PPP1R11O60927 126 aaPredicted RBP19.88■□□□□ 0.77
PTPRU-206ENST00000465525 QRICH1Q2TAL8 776 aa19.88■□□□□ 0.77
PTPRU-206ENST00000465525 WWC2Q6AWC2 1192 aa19.88■□□□□ 0.77
PTPRU-206ENST00000465525 FAM160B2Q86V87 743 aa19.88■□□□□ 0.77
PTPRU-206ENST00000465525 BRI3BPQ8WY22 251 aa19.88■□□□□ 0.77
PTPRU-206ENST00000465525 WASF1Q92558 559 aa19.88■□□□□ 0.77
PTPRU-206ENST00000465525 KCNJ14Q9UNX9 436 aa19.88■□□□□ 0.77
PTPRU-206ENST00000465525 H3BQV1 296 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 PDCP20941 246 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 IFFO2Q5TF58 517 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 CCDC174Q6PII3 467 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 MTMR8Q96EF0 704 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 CHMP5Q9NZZ3 219 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 AGTPBP1Q9UPW5 1226 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 ZDHHC9Q9Y397 364 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 WDR33Q9C0J8 1336 aaKnown RBP19.87■□□□□ 0.77
PTPRU-206ENST00000465525 PNMA6FA0A0J9YX94 578 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 USP17L15C9J2P7 530 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 USP17L13C9JLJ4 530 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 USP17L11C9JVI0 530 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 USP17L18D6R9N7 530 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 USP17L22D6RA61 530 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms