RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 FDX1P10109 184 aa23.81■■□□□ 1.4
SKA3-205ENST00000465471 PRKCZQ05513 592 aa23.81■■□□□ 1.4
SKA3-205ENST00000465471 WTAPQ15007 396 aa23.81■■□□□ 1.4
SKA3-205ENST00000465471 TMEM67Q5HYA8 995 aa23.81■■□□□ 1.4
SKA3-205ENST00000465471 SAMD1Q6SPF0 538 aaPredicted RBP23.81■■□□□ 1.4
SKA3-205ENST00000465471 KIFC2Q96AC6 838 aa23.81■■□□□ 1.4
SKA3-205ENST00000465471 COA7Q96BR5 231 aa23.81■■□□□ 1.4
SKA3-205ENST00000465471 TMEM87BQ96K49 555 aa23.81■■□□□ 1.4
SKA3-205ENST00000465471 GJD2Q9UKL4 321 aa23.81■■□□□ 1.4
SKA3-205ENST00000465471 FRMPD2Q68DX3 1309 aaPredicted RBP23.81■■□□□ 1.4
SKA3-205ENST00000465471 SH2B2O14492 632 aaPredicted RBP23.8■■□□□ 1.4
SKA3-205ENST00000465471 EXOSC10Q01780 885 aaKnown RBP23.8■■□□□ 1.4
SKA3-205ENST00000465471 GPATCH4Q5T3I0 446 aaKnown RBP23.8■■□□□ 1.4
SKA3-205ENST00000465471 TTBK2Q6IQ55 1244 aa23.8■■□□□ 1.4
SKA3-205ENST00000465471 GPR142Q7Z601 462 aa23.8■■□□□ 1.4
SKA3-205ENST00000465471 RIOX2Q8IUF8 465 aa23.8■■□□□ 1.4
SKA3-205ENST00000465471 PRR12Q9ULL5 1215 aa23.8■■□□□ 1.4
SKA3-205ENST00000465471 GABRQQ9UN88 632 aa23.8■■□□□ 1.4
SKA3-205ENST00000465471 PTCH2Q9Y6C5 1203 aa23.8■■□□□ 1.4
SKA3-205ENST00000465471 OAZ1P54368 228 aa23.79■■□□□ 1.4
SKA3-205ENST00000465471 ASPRV1Q53RT3 343 aa23.79■■□□□ 1.4
SKA3-205ENST00000465471 GPHNQ9NQX3 736 aaPredicted RBP23.79■■□□□ 1.4
SKA3-205ENST00000465471 ISY1Q9ULR0 285 aaKnown RBP23.79■■□□□ 1.4
SKA3-205ENST00000465471 ZBED4O75132 1171 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 ERCC3P19447 782 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 STAT3P40763 770 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 LIFRP42702 1097 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 FLT3LGP49771 235 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 TROAPQ12815 778 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 IRF5Q13568 498 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 C8orf34Q49A92 452 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 MORN1Q5T089 497 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 DHX32Q7L7V1 743 aaKnown RBP23.78■■□□□ 1.4
SKA3-205ENST00000465471 PLEKHH3Q7Z736 793 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 USP6NLQ92738 828 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 TEX13BQ9BXU2 312 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 GPCPD1Q9NPB8 672 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 HPS5Q9UPZ3 1129 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 ZNF536O15090 1300 aa23.78■■□□□ 1.4
SKA3-205ENST00000465471 SLC25A27O95847 323 aa23.77■■□□□ 1.4
SKA3-205ENST00000465471 HMGB1P09429 215 aaKnown RBP23.77■■□□□ 1.4
SKA3-205ENST00000465471 SLC16A2P36021 539 aa23.77■■□□□ 1.4
SKA3-205ENST00000465471 IKQ13123 557 aaPredicted RBP23.77■■□□□ 1.4
SKA3-205ENST00000465471 PLS1Q14651 629 aa23.77■■□□□ 1.4
SKA3-205ENST00000465471 SYDE2Q5VT97 1194 aa23.77■■□□□ 1.4
SKA3-205ENST00000465471 SOCS4Q8WXH5 440 aa23.77■■□□□ 1.4
SKA3-205ENST00000465471 RANBP17Q9H2T7 1088 aaKnown RBP23.77■■□□□ 1.4
SKA3-205ENST00000465471 MROH8Q9H579 483 aa23.77■■□□□ 1.4
SKA3-205ENST00000465471 EIF5BO60841 1220 aaKnown RBP23.76■■□□□ 1.39
SKA3-205ENST00000465471 GOLGA8HP0CJ92 632 aa23.76■■□□□ 1.39
SKA3-205ENST00000465471 COPB2P35606 906 aa23.76■■□□□ 1.39
SKA3-205ENST00000465471 ABHD8Q96I13 439 aa23.76■■□□□ 1.39
SKA3-205ENST00000465471 CENPFP49454 3210 aa23.76■■□□□ 1.39
SKA3-205ENST00000465471 PARP1P09874 1014 aaKnown RBP23.75■■□□□ 1.39
SKA3-205ENST00000465471 PTPREP23469 700 aa23.75■■□□□ 1.39
SKA3-205ENST00000465471 GRB14Q14449 540 aa23.75■■□□□ 1.39
SKA3-205ENST00000465471 GRM4Q14833 912 aa23.75■■□□□ 1.39
SKA3-205ENST00000465471 SNRNP48Q6IEG0 339 aaKnown RBP23.75■■□□□ 1.39
SKA3-205ENST00000465471 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.75■■□□□ 1.39
SKA3-205ENST00000465471 SGMS1Q86VZ5 419 aa23.75■■□□□ 1.39
SKA3-205ENST00000465471 CCAR1Q8IX12 1150 aaKnown RBP23.75■■□□□ 1.39
SKA3-205ENST00000465471 TMTC2Q8N394 836 aa23.75■■□□□ 1.39
SKA3-205ENST00000465471 JAKMIP1Q96N16 626 aaKnown RBP23.75■■□□□ 1.39
SKA3-205ENST00000465471 LRRC2Q9BYS8 371 aa23.75■■□□□ 1.39
SKA3-205ENST00000465471 RAVER2Q9HCJ3 691 aaKnown RBP23.75■■□□□ 1.39
SKA3-205ENST00000465471 MAD2L2Q9UI95 211 aa23.75■■□□□ 1.39
SKA3-205ENST00000465471 RIPK3Q9Y572 518 aa23.75■■□□□ 1.39
SKA3-205ENST00000465471 PALM3A6NDB9 673 aaPredicted RBP23.74■■□□□ 1.39
SKA3-205ENST00000465471 SLC15A5A6NIM6 579 aa23.74■■□□□ 1.39
SKA3-205ENST00000465471 DDAH1O94760 285 aa23.74■■□□□ 1.39
SKA3-205ENST00000465471 SEC24BO95487 1268 aa23.74■■□□□ 1.39
SKA3-205ENST00000465471 NCAPG2Q86XI2 1143 aa23.74■■□□□ 1.39
SKA3-205ENST00000465471 ZNF654Q8IZM8 581 aa23.74■■□□□ 1.39
SKA3-205ENST00000465471 ABRAQ8N0Z2 381 aa23.74■■□□□ 1.39
SKA3-205ENST00000465471 RAET1EQ8TD07 263 aa23.74■■□□□ 1.39
SKA3-205ENST00000465471 ARMC5Q96C12 935 aa23.74■■□□□ 1.39
SKA3-205ENST00000465471 MAP3K14Q99558 947 aa23.74■■□□□ 1.39
SKA3-205ENST00000465471 NUDT12Q9BQG2 462 aa23.74■■□□□ 1.39
SKA3-205ENST00000465471 STRNO43815 780 aa23.73■■□□□ 1.39
SKA3-205ENST00000465471 CATIPQ7Z7H3 387 aa23.73■■□□□ 1.39
SKA3-205ENST00000465471 CPXCR1Q8N123 301 aa23.73■■□□□ 1.39
SKA3-205ENST00000465471 STAG2Q8N3U4 1231 aa23.73■■□□□ 1.39
SKA3-205ENST00000465471 PXYLP1Q8TE99 480 aa23.73■■□□□ 1.39
SKA3-205ENST00000465471 IL17RAQ96F46 866 aa23.73■■□□□ 1.39
SKA3-205ENST00000465471 TCEANC2Q96MN5 208 aa23.73■■□□□ 1.39
SKA3-205ENST00000465471 CPVLQ9H3G5 476 aa23.73■■□□□ 1.39
SKA3-205ENST00000465471 CTDP1Q9Y5B0 961 aaPredicted RBP23.73■■□□□ 1.39
SKA3-205ENST00000465471 HOXC6P09630 235 aa23.72■■□□□ 1.39
SKA3-205ENST00000465471 XRCC5P13010 732 aaKnown RBP23.72■■□□□ 1.39
SKA3-205ENST00000465471 CPA1P15085 419 aa23.72■■□□□ 1.39
SKA3-205ENST00000465471 PSMA5P28066 241 aa23.72■■□□□ 1.39
SKA3-205ENST00000465471 SNAP25P60880 206 aa23.72■■□□□ 1.39
SKA3-205ENST00000465471 WDR78Q5VTH9 848 aa23.72■■□□□ 1.39
SKA3-205ENST00000465471 BLOC1S2Q6QNY1 142 aa23.72■■□□□ 1.39
SKA3-205ENST00000465471 FBXL16Q8N461 479 aa23.72■■□□□ 1.39
SKA3-205ENST00000465471 SLAIN1Q8ND83 568 aa23.72■■□□□ 1.39
SKA3-205ENST00000465471 TM6SF1Q9BZW5 370 aa23.72■■□□□ 1.39
SKA3-205ENST00000465471 UBA5Q9GZZ9 404 aa23.72■■□□□ 1.39
SKA3-205ENST00000465471 IVNS1ABPQ9Y6Y0 642 aa23.72■■□□□ 1.39
SKA3-205ENST00000465471 ZNFX1Q9P2E3 1918 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms