RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 KCNH4Q9UQ05 1017 aa15.53■□□□□ 0.08
ATF3-208ENST00000465155 V9GY48 417 aaPredicted RBP15.53■□□□□ 0.08
ATF3-208ENST00000465155 A0A0G2JLL6 359 aaPredicted RBP15.52■□□□□ 0.08
ATF3-208ENST00000465155 PRPF3O43395 683 aaKnown RBP15.52■□□□□ 0.08
ATF3-208ENST00000465155 PRRT2Q7Z6L0 340 aaPredicted RBP15.52■□□□□ 0.08
ATF3-208ENST00000465155 ADGRF4Q8IZF3 695 aa15.52■□□□□ 0.08
ATF3-208ENST00000465155 TANGO6Q9C0B7 1094 aa15.52■□□□□ 0.08
ATF3-208ENST00000465155 RPAP3Q9H6T3 665 aaPredicted RBP15.52■□□□□ 0.08
ATF3-208ENST00000465155 RIOX1Q9H6W3 641 aa15.52■□□□□ 0.08
ATF3-208ENST00000465155 KIF3AQ9Y496 699 aa15.52■□□□□ 0.08
ATF3-208ENST00000465155 PARP14Q460N5 1801 aa15.52■□□□□ 0.07
ATF3-208ENST00000465155 TMEM88BA6NKF7 163 aa15.51■□□□□ 0.07
ATF3-208ENST00000465155 DEXIO95424 95 aa15.51■□□□□ 0.07
ATF3-208ENST00000465155 MKRN3Q13064 507 aaKnown RBP15.51■□□□□ 0.07
ATF3-208ENST00000465155 BTNL9Q6UXG8 535 aa15.51■□□□□ 0.07
ATF3-208ENST00000465155 GADL1Q6ZQY3 521 aa15.51■□□□□ 0.07
ATF3-208ENST00000465155 HOMER1Q86YM7 354 aa15.51■□□□□ 0.07
ATF3-208ENST00000465155 RRP36Q96EU6 259 aaKnown RBP15.51■□□□□ 0.07
ATF3-208ENST00000465155 JMJD4Q9H9V9 463 aa15.51■□□□□ 0.07
ATF3-208ENST00000465155 FEM1BQ9UK73 627 aa15.51■□□□□ 0.07
ATF3-208ENST00000465155 TLL2Q9Y6L7 1015 aa15.51■□□□□ 0.07
ATF3-208ENST00000465155 DDIT3P35638 169 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 ZNF157P51786 506 aaPredicted RBP15.5■□□□□ 0.07
ATF3-208ENST00000465155 FOSBP53539 338 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 SNAPC2Q13487 334 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 SYDE2Q5VT97 1194 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 FAM160B2Q86V87 743 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 CHURC1Q8WUH1 139 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 WASF1Q92558 559 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 AIFM3Q96NN9 605 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 PIGSQ96S52 555 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 FBXO28Q9NVF7 368 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 RBM27Q9P2N5 1060 aaKnown RBP15.5■□□□□ 0.07
ATF3-208ENST00000465155 ABT1Q9ULW3 272 aaKnown RBP15.5■□□□□ 0.07
ATF3-208ENST00000465155 PLA2G6O60733 806 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 PKN1Q16512 942 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 TREML2Q5T2D2 321 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 SPRYD7Q5W111 196 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 LARP1BQ659C4 914 aaKnown RBP15.5■□□□□ 0.07
ATF3-208ENST00000465155 PROCA1Q8NCQ7 364 aaPredicted RBP15.5■□□□□ 0.07
ATF3-208ENST00000465155 KIFC2Q96AC6 838 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 ALG1Q9BT22 464 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 SEC63Q9UGP8 760 aaKnown RBP15.5■□□□□ 0.07
ATF3-208ENST00000465155 PRR12Q9ULL5 1215 aa15.5■□□□□ 0.07
ATF3-208ENST00000465155 FLOT1O75955 427 aa15.49■□□□□ 0.07
ATF3-208ENST00000465155 ZBTB48P10074 688 aaPredicted RBP15.49■□□□□ 0.07
ATF3-208ENST00000465155 SCG2P13521 617 aa15.49■□□□□ 0.07
ATF3-208ENST00000465155 PDCP20941 246 aa15.49■□□□□ 0.07
ATF3-208ENST00000465155 SYT1P21579 422 aa15.49■□□□□ 0.07
ATF3-208ENST00000465155 PFKFB3Q16875 520 aaPredicted RBP15.49■□□□□ 0.07
ATF3-208ENST00000465155 RGMBQ6NW40 437 aa15.49■□□□□ 0.07
ATF3-208ENST00000465155 SLF1Q9BQI6 1058 aa15.49■□□□□ 0.07
ATF3-208ENST00000465155 RLFQ13129 1914 aa15.49■□□□□ 0.07
ATF3-208ENST00000465155 GTF2A2P52657 109 aa15.48■□□□□ 0.07
ATF3-208ENST00000465155 SNAP25P60880 206 aa15.48■□□□□ 0.07
ATF3-208ENST00000465155 MOGSQ13724 837 aa15.48■□□□□ 0.07
ATF3-208ENST00000465155 CDC37Q16543 378 aaPredicted RBP15.48■□□□□ 0.07
ATF3-208ENST00000465155 CATSPERGQ6ZRH7 1159 aa15.48■□□□□ 0.07
ATF3-208ENST00000465155 FASTKD5Q7L8L6 764 aaKnown RBP15.48■□□□□ 0.07
ATF3-208ENST00000465155 RASAL3Q86YV0 1011 aa15.48■□□□□ 0.07
ATF3-208ENST00000465155 PRPF38AQ8NAV1 312 aaKnown RBP15.48■□□□□ 0.07
ATF3-208ENST00000465155 MTMR8Q96EF0 704 aa15.48■□□□□ 0.07
ATF3-208ENST00000465155 C8orf76Q96K31 380 aa15.48■□□□□ 0.07
ATF3-208ENST00000465155 USP17L15C9J2P7 530 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 USP17L13C9JLJ4 530 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 USP17L11C9JVI0 530 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 USP17L18D6R9N7 530 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 USP17L22D6RA61 530 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 USP17L17D6RBQ6 530 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 USP17L19D6RCP7 530 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 USP17L20D6RJB6 530 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 ZBTB5O15062 677 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 USP17L24Q0WX57 530 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 PKP1Q13835 747 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 GPKOWQ92917 476 aaPredicted RBP eCLIP15.47■□□□□ 0.07
ATF3-208ENST00000465155 MS4A4AQ96JQ5 239 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 GJB4Q9NTQ9 266 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 PPP1R9AQ9ULJ8 1098 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 AGTPBP1Q9UPW5 1226 aa15.47■□□□□ 0.07
ATF3-208ENST00000465155 PNMA6FA0A0J9YX94 578 aa15.46■□□□□ 0.07
ATF3-208ENST00000465155 VPS37CA5D8V6 355 aaPredicted RBP15.46■□□□□ 0.07
ATF3-208ENST00000465155 H3BQV1 296 aa15.46■□□□□ 0.07
ATF3-208ENST00000465155 STX6O43752 255 aa15.46■□□□□ 0.07
ATF3-208ENST00000465155 CETPP11597 493 aa15.46■□□□□ 0.07
ATF3-208ENST00000465155 GUCY1B3Q02153 619 aa15.46■□□□□ 0.07
ATF3-208ENST00000465155 TRIM29Q14134 588 aa15.46■□□□□ 0.07
ATF3-208ENST00000465155 QRICH1Q2TAL8 776 aa15.46■□□□□ 0.07
ATF3-208ENST00000465155 IFFO2Q5TF58 517 aa15.46■□□□□ 0.07
ATF3-208ENST00000465155 HEATR3Q7Z4Q2 680 aa15.46■□□□□ 0.07
ATF3-208ENST00000465155 VPS54Q9P1Q0 977 aa15.46■□□□□ 0.07
ATF3-208ENST00000465155 COL11A1P12107 1806 aaPredicted RBP15.46■□□□□ 0.07
ATF3-208ENST00000465155 CCL15-CCL14A0A0B4J2E2 113 aa15.46■□□□□ 0.06
ATF3-208ENST00000465155 XBP1P17861 261 aa15.46■□□□□ 0.06
ATF3-208ENST00000465155 HOXA7P31268 230 aaPredicted RBP15.46■□□□□ 0.06
ATF3-208ENST00000465155 COG2Q14746 738 aa15.46■□□□□ 0.06
ATF3-208ENST00000465155 CCL15Q16663 113 aa15.46■□□□□ 0.06
ATF3-208ENST00000465155 WWC2Q6AWC2 1192 aa15.46■□□□□ 0.06
ATF3-208ENST00000465155 OTUD7BQ6GQQ9 843 aa15.46■□□□□ 0.06
ATF3-208ENST00000465155 RANBP17Q9H2T7 1088 aaKnown RBP15.46■□□□□ 0.06
ATF3-208ENST00000465155 CHMP5Q9NZZ3 219 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms