RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 IPO9Q96P70 1041 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 SLC26A8Q96RN1 970 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 HDAC8Q9BY41 377 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 GPR62Q9BZJ7 368 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 LRRC4CQ9HCJ2 640 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 FANCLQ9NW38 375 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 PIM2Q9P1W9 311 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 EMC9Q9Y3B6 208 aa5.39□□□□□ -1.55
HMGXB4-205ENST00000464480 ESYT3A0FGR9 886 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 GSNP06396 782 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 PPP2R5DQ14738 602 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 IFI16Q16666 785 aaKnown RBP5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 ZMYM1Q5SVZ6 1142 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 THAP5Q7Z6K1 395 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 ZDHHC13Q8IUH4 622 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 TRIM59Q8IWR1 403 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 ARHGEF39Q8N4T4 335 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 ZBTB38Q8NAP3 1195 aaPredicted RBP5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 DAGLBQ8NCG7 672 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 NETO1Q8TDF5 533 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 ZDHHC15Q96MV8 337 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 CDC6Q99741 560 aa5.38□□□□□ -1.55
HMGXB4-205ENST00000464480 CCDC163A0A0D9SF12 145 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 SHISA3A0PJX4 238 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 H3BS24 57 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 MEIS1O00470 390 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 ADCY3O60266 1144 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 KCNH1O95259 989 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 FAM153BP0C7A2 387 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 AMPD2Q01433 879 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 POU4F1Q01851 419 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 SQSTM1Q13501 440 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 NKPD1Q17RQ9 610 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 PRSS36Q5K4E3 855 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 CDKAL1Q5VV42 579 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 SPACA3Q8IXA5 215 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 SYNPOQ8N3V7 929 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 ZNF655Q8N720 491 aaPredicted RBP5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 MRGPRX3Q96LB0 322 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 SLKQ9H2G2 1235 aaPredicted RBP5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 KANSL2Q9H9L4 492 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 ARHGEF4Q9NR80 690 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 SNX11Q9Y5W9 270 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 ST14Q9Y5Y6 855 aa5.37□□□□□ -1.55
HMGXB4-205ENST00000464480 TMEM265A0A087WTH1 108 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 SCO2A0A1W2PP80 73 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 H0Y8X5 98 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 SRFP11831 508 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 FOSL1P15407 271 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 PLEKHG4Q58EX7 1191 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 EGFLAMQ63HQ2 1017 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 CRTC3Q6UUV7 619 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 C16orf86Q6ZW13 317 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 TSPYL5Q86VY4 417 aaPredicted RBP5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 BTN2A2Q8WVV5 523 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 HSPA12BQ96MM6 686 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 LGR4Q9BXB1 951 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 DUSP15Q9H1R2 295 aaPredicted RBP5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 NKX2-4Q9H2Z4 354 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 U3KQE9 123 aa5.36□□□□□ -1.55
HMGXB4-205ENST00000464480 TRBV23-1A0A0A0MS06 115 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 SSU72P8A0A1W2PR75 194 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 TBX1O43435 398 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 FGFR1P11362 822 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 TPP2P29144 1249 aaPredicted RBP5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 GRIK1P39086 918 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 NOP2P46087 812 aaKnown RBP5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 TCEA2Q15560 299 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 GTF2IRD2BQ6EKJ0 949 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 GTF2IRD2Q86UP8 949 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 PLD6Q8N2A8 252 aaKnown RBP5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 TCTN2Q96GX1 697 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 HRASLS5Q96KN8 279 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 FEZ1Q99689 392 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 MINPP1Q9UNW1 487 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 PLAGL2Q9UPG8 496 aa5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 GPR55Q9Y2T6 319 aaPredicted RBP5.35□□□□□ -1.55
HMGXB4-205ENST00000464480 PITPNM2Q9BZ72 1349 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 PRR19A6NJB7 356 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 PRODHO43272 600 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 ASMTLO95671 621 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 CPP00450 1065 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 TGFB1P01137 390 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 CD3EP07766 207 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 SNRPB2P08579 225 aaKnown RBP5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 ENDOUP21128 410 aaKnown RBP5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 LTKP29376 864 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 HOXC12P31275 282 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 BMP8BP34820 402 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 CTSKP43235 329 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 PCBP3P57721 371 aaKnown RBP5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 SUMO1P63165 101 aaKnown RBP5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 YOD1Q5VVQ6 348 aaPredicted RBP5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 NSMFQ6X4W1 530 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 TMPRSS7Q7RTY8 843 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 SCUBE1Q8IWY4 988 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 ASB11Q8WXH4 323 aa5.34□□□□□ -1.55
HMGXB4-205ENST00000464480 KCTD13Q8WZ19 329 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms