RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CWF19L1Q69YN2 538 aaKnown RBP6.36□□□□□ -1.39
CLK1-208ENST00000464454 CBLL1Q75N03 491 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 FAM178BQ8IXR5 827 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 LINC00116Q8NCU8 138 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 KLHL25Q9H0H3 589 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 SLAMF8Q9P0V8 285 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 TMEM59LQ9UK28 342 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 ADAMTS6Q9UKP5 1117 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 TCFL5Q9UL49 500 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 ZNF451Q9Y4E5 1061 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 RBAK-RBAKDNI3L0D1 243 aa6.35□□□□□ -1.39
CLK1-208ENST00000464454 EPHX1P07099 455 aa6.35□□□□□ -1.39
CLK1-208ENST00000464454 BMP8BP34820 402 aa6.35□□□□□ -1.39
CLK1-208ENST00000464454 GTF2F1P35269 517 aaKnown RBP eCLIP6.35□□□□□ -1.39
CLK1-208ENST00000464454 ZNF445P59923 1031 aa6.35□□□□□ -1.39
CLK1-208ENST00000464454 NBPF6Q5VWK0 638 aa6.35□□□□□ -1.39
CLK1-208ENST00000464454 C6orf15Q6UXA7 325 aaPredicted RBP6.35□□□□□ -1.39
CLK1-208ENST00000464454 ADAT2Q7Z6V5 191 aaKnown RBP6.35□□□□□ -1.39
CLK1-208ENST00000464454 CRACR2BQ8N4Y2 399 aaPredicted RBP6.35□□□□□ -1.39
CLK1-208ENST00000464454 FIBCD1Q8N539 461 aa6.35□□□□□ -1.39
CLK1-208ENST00000464454 USHBP1Q8N6Y0 703 aa6.35□□□□□ -1.39
CLK1-208ENST00000464454 HNRNPLLQ8WVV9 542 aaKnown RBP6.35□□□□□ -1.39
CLK1-208ENST00000464454 NBPF4Q96M43 638 aa6.35□□□□□ -1.39
CLK1-208ENST00000464454 HIRIP3Q9BW71 556 aaPredicted RBP6.35□□□□□ -1.39
CLK1-208ENST00000464454 TRIM55Q9BYV6 548 aa6.35□□□□□ -1.39
CLK1-208ENST00000464454 PRDM7Q9NQW5 492 aa6.35□□□□□ -1.39
CLK1-208ENST00000464454 DIS3Q9Y2L1 958 aaKnown RBP6.35□□□□□ -1.39
CLK1-208ENST00000464454 MEIS1O00470 390 aa6.34□□□□□ -1.39
CLK1-208ENST00000464454 U2SURPO15042 1029 aaKnown RBP6.34□□□□□ -1.39
CLK1-208ENST00000464454 DDAH1O94760 285 aa6.34□□□□□ -1.39
CLK1-208ENST00000464454 SYPP08247 313 aa6.34□□□□□ -1.39
CLK1-208ENST00000464454 GDNFP39905 211 aa6.34□□□□□ -1.39
CLK1-208ENST00000464454 TEKQ02763 1124 aa6.34□□□□□ -1.39
CLK1-208ENST00000464454 ATG4DQ86TL0 474 aaPredicted RBP6.34□□□□□ -1.39
CLK1-208ENST00000464454 LRRN4CLQ8ND94 238 aa6.34□□□□□ -1.39
CLK1-208ENST00000464454 FLAD1Q8NFF5 587 aa6.34□□□□□ -1.39
CLK1-208ENST00000464454 APBA2Q99767 749 aa6.34□□□□□ -1.39
CLK1-208ENST00000464454 FOXP3Q9BZS1 431 aa6.34□□□□□ -1.39
CLK1-208ENST00000464454 SUGT1Q9Y2Z0 365 aa6.34□□□□□ -1.39
CLK1-208ENST00000464454 KLF4O43474 513 aa6.33□□□□□ -1.4
CLK1-208ENST00000464454 RAC2P15153 192 aa6.33□□□□□ -1.4
CLK1-208ENST00000464454 YBX3P16989 372 aaKnown RBP eCLIP6.33□□□□□ -1.4
CLK1-208ENST00000464454 NOP2P46087 812 aaKnown RBP6.33□□□□□ -1.4
CLK1-208ENST00000464454 POU4F1Q01851 419 aa6.33□□□□□ -1.4
CLK1-208ENST00000464454 RAB33AQ14088 237 aa6.33□□□□□ -1.4
CLK1-208ENST00000464454 CRTC3Q6UUV7 619 aa6.33□□□□□ -1.4
CLK1-208ENST00000464454 OXR1Q8N573 874 aa6.33□□□□□ -1.4
CLK1-208ENST00000464454 BRF1Q92994 677 aa6.33□□□□□ -1.4
CLK1-208ENST00000464454 RCC1LQ96I51 464 aaKnown RBP6.33□□□□□ -1.4
CLK1-208ENST00000464454 NOL6Q9H6R4 1146 aaKnown RBP6.33□□□□□ -1.4
CLK1-208ENST00000464454 ZNF205O95201 554 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 VAV1P15498 845 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 JUNBP17275 347 aaPredicted RBP6.32□□□□□ -1.4
CLK1-208ENST00000464454 RPL10P27635 214 aaKnown RBP6.32□□□□□ -1.4
CLK1-208ENST00000464454 CTSKP43235 329 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 AFMP43652 599 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 CHRNEQ04844 493 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 RBL2Q08999 1139 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 GRB10Q13322 594 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 DDR2Q16832 855 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 RALGPS1Q5JS13 557 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 SOGA3Q5TF21 947 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 POMZP3Q6PJE2 187 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 EEPD1Q7L9B9 569 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 WAPLQ7Z5K2 1190 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 PDZD8Q8NEN9 1154 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 FGD4Q96M96 766 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 EPN3Q9H201 632 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 MINPP1Q9UNW1 487 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 CTNND2Q9UQB3 1225 aa6.32□□□□□ -1.4
CLK1-208ENST00000464454 DNAJC25-GNG10A0A024R161 153 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 FITM1A5D6W6 292 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 H0Y8X5 98 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 NOP56O00567 594 aaKnown RBP6.31□□□□□ -1.4
CLK1-208ENST00000464454 GJB6O95452 261 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 ZGLP1P0C6A0 271 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 SPPL2CQ8IUH8 684 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 ANKS4BQ8N8V4 417 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 ADCY4Q8NFM4 1077 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 FCRL2Q96LA5 508 aaPredicted RBP6.31□□□□□ -1.4
CLK1-208ENST00000464454 ZDHHC15Q96MV8 337 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 ADAMTS10Q9H324 1103 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 CGGBP1Q9UFW8 167 aaPredicted RBP6.31□□□□□ -1.4
CLK1-208ENST00000464454 SUSD2Q9UGT4 822 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 ZMYM5Q9UJ78 669 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 ZNF281Q9Y2X9 895 aa6.31□□□□□ -1.4
CLK1-208ENST00000464454 B2RBV5 119 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 AGRPO00253 132 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 SUSD5O60279 629 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 FKTNO75072 461 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 ITGB5P18084 799 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 HK2P52789 917 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 PPP2R5DQ14738 602 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 ARHGEF39Q8N4T4 335 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 BVESQ8NE79 360 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 DNAJC2Q99543 621 aaKnown RBP6.3□□□□□ -1.4
CLK1-208ENST00000464454 CDADC1Q9BWV3 514 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 KRTAP9-9Q9BYP9 154 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 KRTAP9-4Q9BYQ2 154 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms