RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 PAXIP1Q6ZW49 1069 aaPredicted RBP16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 CMTR1Q8N1G2 835 aaKnown RBP16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 RIOX1Q9H6W3 641 aa16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 SLC45A1Q9Y2W3 748 aa16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 CCDC196A0A1B0GTZ2 297 aa16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 IGF2BP3O00425 579 aaKnown RBP eCLIP16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 AOC2O75106 756 aa16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 IFNAR1P17181 557 aa16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 STAT2P52630 851 aa16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 POTEEQ6S8J3 1075 aa16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 FAM160B2Q86V87 743 aa16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 CCDC83Q8IWF9 413 aa16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 CHURC1Q8WUH1 139 aa16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 LZTS2Q9BRK4 669 aa16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 ADAMTS5Q9UNA0 930 aa16.15■□□□□ 0.18
PHACTR4-203ENST00000463428 DSG3P32926 999 aa16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 GRM1Q13255 1194 aa16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 COG2Q14746 738 aa16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 SYDE2Q5VT97 1194 aa16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 HSCBQ8IWL3 235 aa16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 ADGRF4Q8IZF3 695 aa16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 MTMR8Q96EF0 704 aa16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 TANGO6Q9C0B7 1094 aa16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 ASCC2Q9H1I8 757 aaPredicted RBP16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 PRR12Q9ULL5 1215 aa16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 MYH6P13533 1939 aa16.14■□□□□ 0.17
PHACTR4-203ENST00000463428 MYPNQ86TC9 1320 aa16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 CNTNAP5Q8WYK1 1306 aa16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 PDHXO00330 501 aa16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 DTNBO60941 627 aa16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 FLOT1O75955 427 aa16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 PABPC4Q13310 644 aaKnown RBP eCLIP16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 IFNL1Q8IU54 200 aa16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 CCDC82Q8N4S0 544 aa16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 PRPF38AQ8NAV1 312 aaKnown RBP16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 NSUN7Q8NE18 718 aaKnown RBP16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 P2RX7Q99572 595 aaKnown RBP16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 SLF1Q9BQI6 1058 aa16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 JMJD4Q9H9V9 463 aa16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 ZCCHC17Q9NP64 241 aaKnown RBP16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 SMCHD1A6NHR9 2005 aa16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 COL11A1P12107 1806 aaPredicted RBP16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 THSD7BQ9C0I4 1608 aa16.13■□□□□ 0.17
PHACTR4-203ENST00000463428 SPDYE16A6NNV3 312 aaPredicted RBP16.12■□□□□ 0.17
PHACTR4-203ENST00000463428 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
PHACTR4-203ENST00000463428 MAP2K2P36507 400 aa16.12■□□□□ 0.17
PHACTR4-203ENST00000463428 SREBF2Q12772 1141 aa16.12■□□□□ 0.17
PHACTR4-203ENST00000463428 LBX2Q6XYB7 198 aa16.12■□□□□ 0.17
PHACTR4-203ENST00000463428 SMARCC2Q8TAQ2 1214 aa16.12■□□□□ 0.17
PHACTR4-203ENST00000463428 LLPHQ9BRT6 129 aaKnown RBP16.12■□□□□ 0.17
PHACTR4-203ENST00000463428 HOXC10Q9NYD6 342 aa16.12■□□□□ 0.17
PHACTR4-203ENST00000463428 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
PHACTR4-203ENST00000463428 A0A0G2JMZ2 1700 aa16.12■□□□□ 0.17
PHACTR4-203ENST00000463428 PRPF3O43395 683 aaKnown RBP16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 FDPSP14324 419 aaKnown RBP16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 OSBPP22059 807 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 REM2Q8IYK8 340 aaPredicted RBP16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 REPS2Q8NFH8 660 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 PHKBQ93100 1093 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 KIFC2Q96AC6 838 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 ATG4CQ96DT6 458 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 RANBP17Q9H2T7 1088 aaKnown RBP16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 VAT1LQ9HCJ6 419 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 VWA5AO00534 786 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 CPLX1O14810 134 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 JAK2O60674 1132 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 CYP2C8P10632 490 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 SNAP25P60880 206 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 HERVK_113P62684 666 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 IRX3P78415 501 aaPredicted RBP16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 IKQ13123 557 aaPredicted RBP16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 PKN1Q16512 942 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 CPLX2Q6PUV4 134 aaKnown RBP16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 PIGSQ96S52 555 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 RNF26Q9BY78 433 aaPredicted RBP16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 SLC38A10Q9HBR0 1119 aa16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 V9GY48 417 aaPredicted RBP16.11■□□□□ 0.17
PHACTR4-203ENST00000463428 hCG_1642624A0A1W2PR95 340 aa16.1■□□□□ 0.17
PHACTR4-203ENST00000463428 FMNL1O95466 1100 aaPredicted RBP16.1■□□□□ 0.17
PHACTR4-203ENST00000463428 FDX1P10109 184 aa16.1■□□□□ 0.17
PHACTR4-203ENST00000463428 INTS4Q96HW7 963 aaKnown RBP16.1■□□□□ 0.17
PHACTR4-203ENST00000463428 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
PHACTR4-203ENST00000463428 ZNF536O15090 1300 aa16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 ADGRA2Q96PE1 1338 aa16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 STK36Q9NRP7 1315 aa16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 PTPDC1A2A3K4 754 aa16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 PPP1R11O60927 126 aaPredicted RBP16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 CNMDO75829 334 aa16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 CDKL5O76039 1030 aa16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 ANP32AP39687 249 aaKnown RBP16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 SSRP1Q08945 709 aaKnown RBP16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 BECN1Q14457 450 aa16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 CDC37Q16543 378 aaPredicted RBP16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 QRICH1Q2TAL8 776 aa16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 DNAJC5GQ8N7S2 189 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms