RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 FOXP2O15409 715 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 SEPT4O43236 478 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 ORC4O43929 436 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 PLA2G6O60733 806 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 HSPD1P10809 573 aaKnown RBP8.63□□□□□ -1.03
PTPRF-210ENST00000463041 BMP3P12645 472 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 CYBAP13498 195 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 SDSP20132 328 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 OAZ1P54368 228 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 CTDSPL2Q05D32 466 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 ZNF792Q3KQV3 632 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 VPS53Q5VIR6 699 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 RCSD1Q6JBY9 416 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 CHRDL2Q6WN34 429 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 FAM160B2Q86V87 743 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 MSL3Q8N5Y2 521 aaKnown RBP8.63□□□□□ -1.03
PTPRF-210ENST00000463041 TRPV1Q8NER1 839 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 KIFC2Q96AC6 838 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 DDX11Q96FC9 970 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 GMCL1Q96IK5 515 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 MAML3Q96JK9 1138 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 FAM227BQ96M60 508 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 SLC38A10Q9HBR0 1119 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 INCENPQ9NQS7 918 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 FBXO40Q9UH90 709 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 ZNF236Q9UL36 1845 aa8.63□□□□□ -1.03
PTPRF-210ENST00000463041 A0A1W2PPC1 479 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 TMEM232C9JQI7 657 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 HIP1O00291 1037 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 DNM1LO00429 736 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 RANBP6O60518 1105 aaKnown RBP8.62□□□□□ -1.03
PTPRF-210ENST00000463041 PCP11498 1178 aaKnown RBP8.62□□□□□ -1.03
PTPRF-210ENST00000463041 MCCP23508 829 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 BMP8BP34820 402 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 SLC1A4P43007 532 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 NOVP48745 357 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 NT5C2P49902 561 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 FXR1P51114 621 aaKnown RBP eCLIP8.62□□□□□ -1.03
PTPRF-210ENST00000463041 NMIQ13287 307 aaPredicted RBP8.62□□□□□ -1.03
PTPRF-210ENST00000463041 PRAMEF19Q5SWL8 479 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 SNRNP48Q6IEG0 339 aaKnown RBP8.62□□□□□ -1.03
PTPRF-210ENST00000463041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.62□□□□□ -1.03
PTPRF-210ENST00000463041 CPXCR1Q8N123 301 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 CHST13Q8NET6 341 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 STAG1Q8WVM7 1258 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 TTC14Q96N46 770 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 TINF2Q9BSI4 451 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 SENP6Q9GZR1 1112 aaPredicted RBP8.62□□□□□ -1.03
PTPRF-210ENST00000463041 PRO3102Q9H379 93 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 IL17RBQ9NRM6 502 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 TCP11L1Q9NUJ3 509 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 RBM27Q9P2N5 1060 aaKnown RBP8.62□□□□□ -1.03
PTPRF-210ENST00000463041 STX8Q9UNK0 236 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 RIPK3Q9Y572 518 aa8.62□□□□□ -1.03
PTPRF-210ENST00000463041 PFASO15067 1338 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 ZMYM6O95789 1325 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 CCDC171Q6TFL3 1326 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 DNAJC25-GNG10A0A024R161 153 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 A0A0D9SFI3 127 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 PGK2P07205 417 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 STAT2P52630 851 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 TKFCQ3LXA3 575 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 MFSD6Q6ZSS7 791 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 ZNF467Q7Z7K2 595 aaPredicted RBP8.61□□□□□ -1.03
PTPRF-210ENST00000463041 C7orf61Q8IZ16 206 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 LRRC47Q8N1G4 583 aaKnown RBP8.61□□□□□ -1.03
PTPRF-210ENST00000463041 RAVER2Q9HCJ3 691 aaKnown RBP8.61□□□□□ -1.03
PTPRF-210ENST00000463041 FRMPD3Q5JV73 1810 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 MCM3APO60318 1980 aa8.61□□□□□ -1.03
PTPRF-210ENST00000463041 KBTBD13C9JR72 458 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 ZNF213O14771 459 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 TOP1P11387 765 aaKnown RBP8.6□□□□□ -1.03
PTPRF-210ENST00000463041 SLC4A3P48751 1232 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 IKQ13123 557 aaPredicted RBP8.6□□□□□ -1.03
PTPRF-210ENST00000463041 LRRC26Q2I0M4 334 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 AKNAD1Q5T1N1 836 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 GJC2Q5T442 439 aaPredicted RBP8.6□□□□□ -1.03
PTPRF-210ENST00000463041 MAMDC4Q6UXC1 1216 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 ZNF589Q86UQ0 364 aaPredicted RBP8.6□□□□□ -1.03
PTPRF-210ENST00000463041 ANKRD35Q8N283 1001 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 DCAF4Q8WV16 495 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 GDF15Q99988 308 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 RNF41Q9H4P4 317 aaPredicted RBP8.6□□□□□ -1.03
PTPRF-210ENST00000463041 TOMM22Q9NS69 142 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 DIAPH3Q9NSV4 1193 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 CNPY2Q9Y2B0 182 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 TACC3Q9Y6A5 838 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 SZT2Q5T011 3432 aa8.6□□□□□ -1.03
PTPRF-210ENST00000463041 SYNGAP1Q96PV0 1343 aa8.59□□□□□ -1.03
PTPRF-210ENST00000463041 NMT2O60551 498 aa8.59□□□□□ -1.03
PTPRF-210ENST00000463041 SNAI1O95863 264 aaPredicted RBP8.59□□□□□ -1.03
PTPRF-210ENST00000463041 ZNF865P0CJ78 1059 aaPredicted RBP8.59□□□□□ -1.03
PTPRF-210ENST00000463041 RARBP10826 455 aa8.59□□□□□ -1.03
PTPRF-210ENST00000463041 LRRC41Q15345 812 aa8.59□□□□□ -1.03
PTPRF-210ENST00000463041 CCDC178Q5BJE1 867 aa8.59□□□□□ -1.03
PTPRF-210ENST00000463041 RRP12Q5JTH9 1297 aaKnown RBP8.59□□□□□ -1.03
PTPRF-210ENST00000463041 ANO1Q5XXA6 986 aa8.59□□□□□ -1.03
PTPRF-210ENST00000463041 CWC27Q6UX04 472 aaKnown RBP8.59□□□□□ -1.03
PTPRF-210ENST00000463041 BTNL9Q6UXG8 535 aa8.59□□□□□ -1.03
PTPRF-210ENST00000463041 SLC39A5Q6ZMH5 540 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms