RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 DPH5Q9H2P9 285 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 EVI5O60447 810 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 ZCRB1Q8TBF4 217 aaKnown RBP17.42■□□□□ 0.38
SMC4-204ENST00000462787 SNX29Q8TEQ0 813 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 ZNF594Q96JF6 807 aaPredicted RBP17.42■□□□□ 0.38
SMC4-204ENST00000462787 RUNDC3BQ96NL0 473 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 ATP10AO60312 1499 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 INF2Q27J81 1249 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 ARMCX5Q6P1M9 558 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 ZPR1O75312 459 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 MRPL12P52815 198 aaKnown RBP17.42■□□□□ 0.38
SMC4-204ENST00000462787 IRX4P78413 519 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 HERC4Q5GLZ8 1057 aaPredicted RBP17.42■□□□□ 0.38
SMC4-204ENST00000462787 CFAP157Q5JU67 520 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 GPIHBP1Q8IV16 184 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.42■□□□□ 0.38
SMC4-204ENST00000462787 MED23Q9ULK4 1368 aa17.42■□□□□ 0.38
SMC4-204ENST00000462787 ZBED6P86452 979 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 RAB3IL1Q8TBN0 382 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 KLHL29Q96CT2 875 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 DHTKD1Q96HY7 919 aaPredicted RBP17.41■□□□□ 0.38
SMC4-204ENST00000462787 LZTS2Q9BRK4 669 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 GGCXP38435 758 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 EHHADHQ08426 723 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 DYMQ7RTS9 669 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 IL17REQ8NFR9 667 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 P3H4Q92791 437 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 GOLPH3LQ9H4A5 285 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 SPDYE3A6NKU9 549 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 CTNND1O60716 968 aaKnown RBP17.41■□□□□ 0.38
SMC4-204ENST00000462787 NBPF6Q5VWK0 638 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 NBPF4Q96M43 638 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 SYNCQ9H7C4 482 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 STK24Q9Y6E0 443 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 TOB2Q14106 344 aaPredicted RBP17.41■□□□□ 0.38
SMC4-204ENST00000462787 E4F1Q66K89 784 aaPredicted RBP17.41■□□□□ 0.38
SMC4-204ENST00000462787 ALDH8A1Q9H2A2 487 aaPredicted RBP17.41■□□□□ 0.38
SMC4-204ENST00000462787 NOP53Q9NZM5 478 aaKnown RBP17.41■□□□□ 0.38
SMC4-204ENST00000462787 SH3TC1Q8TE82 1336 aa17.41■□□□□ 0.38
SMC4-204ENST00000462787 RPAP1Q9BWH6 1393 aaPredicted RBP17.4■□□□□ 0.38
SMC4-204ENST00000462787 ANO9A1A5B4 782 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 RASSF7Q02833 373 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 PDCLQ13371 301 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 RASIP1Q5U651 963 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 B4DLN1 442 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 ZNF658Q5TYW1 1059 aaPredicted RBP17.4■□□□□ 0.38
SMC4-204ENST00000462787 CNOT6LQ96LI5 555 aaKnown RBP17.4■□□□□ 0.38
SMC4-204ENST00000462787 TRIM66O15016 1216 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 ITGA6P23229 1130 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 VIPAS39Q9H9C1 493 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 DBNLQ9UJU6 430 aaKnown RBP17.4■□□□□ 0.38
SMC4-204ENST00000462787 H2AFZP0C0S5 128 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 IQCB1Q15051 598 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 UAP1Q16222 522 aaPredicted RBP17.4■□□□□ 0.38
SMC4-204ENST00000462787 MAP7D1Q3KQU3 841 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 H2AFVQ71UI9 128 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 VCX3AQ9NNX9 186 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 GPR108Q9NPR9 543 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 DENND2AQ9ULE3 1009 aa17.4■□□□□ 0.38
SMC4-204ENST00000462787 CASQ2O14958 399 aaPredicted RBP17.39■□□□□ 0.37
SMC4-204ENST00000462787 EIF3BP55884 814 aaKnown RBP17.39■□□□□ 0.37
SMC4-204ENST00000462787 MYOCDQ8IZQ8 938 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 ANKRD13CQ8N6S4 541 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 LOC102724159A0A0B4J2E5 919 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 I3L4J1 428 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 FMNL1O95466 1100 aaPredicted RBP17.39■□□□□ 0.37
SMC4-204ENST00000462787 PWP2Q15269 919 aaKnown RBP17.39■□□□□ 0.37
SMC4-204ENST00000462787 U2AF1L4Q8WU68 220 aaKnown RBP17.39■□□□□ 0.37
SMC4-204ENST00000462787 IMPG2Q9BZV3 1241 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 CUEDC2Q9H467 287 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 TPX2Q9ULW0 747 aaKnown RBP17.39■□□□□ 0.37
SMC4-204ENST00000462787 TRPM1Q7Z4N2 1603 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 ATP7AQ04656 1500 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 PLCG2P16885 1265 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 STAT1P42224 750 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 TRAPPC10P48553 1259 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 PTGDRQ13258 359 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 TAF11Q15544 211 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 RESP18Q5W5W9 173 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 APOA5Q6Q788 366 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 NYAP1Q6ZVC0 841 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 LPIN2Q92539 896 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 SAAL1Q96ER3 474 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 EPC1Q9H2F5 836 aa17.39■□□□□ 0.37
SMC4-204ENST00000462787 TRIM37O94972 964 aa17.38■□□□□ 0.37
SMC4-204ENST00000462787 BCRP11274 1271 aa17.38■□□□□ 0.37
SMC4-204ENST00000462787 NHEJ1Q9H9Q4 299 aaPredicted RBP17.38■□□□□ 0.37
SMC4-204ENST00000462787 ADGRG1Q9Y653 693 aa17.38■□□□□ 0.37
SMC4-204ENST00000462787 BZW2Q9Y6E2 419 aaKnown RBP17.38■□□□□ 0.37
SMC4-204ENST00000462787 CCDC13Q8IYE1 715 aa17.38■□□□□ 0.37
SMC4-204ENST00000462787 GLT8D2Q9H1C3 349 aa17.38■□□□□ 0.37
SMC4-204ENST00000462787 TXNDC16Q9P2K2 825 aa17.38■□□□□ 0.37
SMC4-204ENST00000462787 MYL1P05976 194 aa17.38■□□□□ 0.37
SMC4-204ENST00000462787 USP14P54578 494 aa17.38■□□□□ 0.37
SMC4-204ENST00000462787 CALCRLQ16602 461 aa17.38■□□□□ 0.37
SMC4-204ENST00000462787 BLIDQ8IZY5 108 aa17.38■□□□□ 0.37
SMC4-204ENST00000462787 TLR7Q9NYK1 1049 aaKnown RBP17.38■□□□□ 0.37
SMC4-204ENST00000462787 SRPRBQ9Y5M8 271 aaKnown RBP17.38■□□□□ 0.37
SMC4-204ENST00000462787 TYW1Q9NV66 732 aaKnown RBP17.38■□□□□ 0.37
SMC4-204ENST00000462787 USH1CQ9Y6N9 552 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms