RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 FEM1BQ9UK73 627 aa21.28■■□□□ 1
SSB-206ENST00000461708 A0A0C4DFX4 3053 aa21.28■■□□□ 1
SSB-206ENST00000461708 SALL3Q9BXA9 1300 aa21.28■■□□□ 1
SSB-206ENST00000461708 DNAJC25-GNG10A0A024R161 153 aa21.27■■□□□ 1
SSB-206ENST00000461708 ZBED4O75132 1171 aa21.27■■□□□ 1
SSB-206ENST00000461708 PRDM1O75626 825 aa21.27■■□□□ 1
SSB-206ENST00000461708 FDX1P10109 184 aa21.27■■□□□ 1
SSB-206ENST00000461708 RARBP10826 455 aa21.27■■□□□ 1
SSB-206ENST00000461708 MDM2Q00987 491 aaPredicted RBP21.27■■□□□ 1
SSB-206ENST00000461708 FAM47AQ5JRC9 791 aa21.27■■□□□ 1
SSB-206ENST00000461708 PPP4R3BQ5MIZ7 849 aa21.27■■□□□ 1
SSB-206ENST00000461708 ANO1Q5XXA6 986 aa21.27■■□□□ 1
SSB-206ENST00000461708 SNRNP48Q6IEG0 339 aaKnown RBP21.27■■□□□ 1
SSB-206ENST00000461708 MAMDC4Q6UXC1 1216 aa21.27■■□□□ 1
SSB-206ENST00000461708 ZNF467Q7Z7K2 595 aaPredicted RBP21.27■■□□□ 1
SSB-206ENST00000461708 SEC62Q99442 399 aaKnown RBP21.27■■□□□ 1
SSB-206ENST00000461708 NAPBQ9H115 298 aa21.27■■□□□ 1
SSB-206ENST00000461708 SLC38A10Q9HBR0 1119 aa21.27■■□□□ 1
SSB-206ENST00000461708 PHF24Q9UPV7 400 aa21.27■■□□□ 1
SSB-206ENST00000461708 SYNGAP1Q96PV0 1343 aa21.27■□□□□ 0.99
SSB-206ENST00000461708 ZNF865P0CJ78 1059 aaPredicted RBP21.26■□□□□ 0.99
SSB-206ENST00000461708 TSPY3P0CV98 308 aa21.26■□□□□ 0.99
SSB-206ENST00000461708 TSPY8P0CW00 308 aa21.26■□□□□ 0.99
SSB-206ENST00000461708 ADCYAP1R1P41586 468 aa21.26■□□□□ 0.99
SSB-206ENST00000461708 RRP1P56182 461 aaKnown RBP21.26■□□□□ 0.99
SSB-206ENST00000461708 RNF180Q86T96 592 aa21.26■□□□□ 0.99
SSB-206ENST00000461708 XPNPEP3Q9NQH7 507 aa21.26■□□□□ 0.99
SSB-206ENST00000461708 CNPY2Q9Y2B0 182 aa21.26■□□□□ 0.99
SSB-206ENST00000461708 LTBP2Q14767 1821 aa21.25■□□□□ 0.99
SSB-206ENST00000461708 AKR1A1P14550 325 aa21.25■□□□□ 0.99
SSB-206ENST00000461708 PPARAQ07869 468 aa21.25■□□□□ 0.99
SSB-206ENST00000461708 DDX11Q96FC9 970 aa21.25■□□□□ 0.99
SSB-206ENST00000461708 FBXO40Q9UH90 709 aa21.25■□□□□ 0.99
SSB-206ENST00000461708 ATP11BQ9Y2G3 1177 aa21.25■□□□□ 0.99
SSB-206ENST00000461708 RIPK3Q9Y572 518 aa21.25■□□□□ 0.99
SSB-206ENST00000461708 CUL9Q8IWT3 2517 aa21.25■□□□□ 0.99
SSB-206ENST00000461708 TFAP4Q01664 338 aa21.24■□□□□ 0.99
SSB-206ENST00000461708 CHST13Q8NET6 341 aa21.24■□□□□ 0.99
SSB-206ENST00000461708 GMCL1Q96IK5 515 aa21.24■□□□□ 0.99
SSB-206ENST00000461708 ZBTB47Q9UFB7 747 aaPredicted RBP21.24■□□□□ 0.99
SSB-206ENST00000461708 CTDP1Q9Y5B0 961 aaPredicted RBP21.24■□□□□ 0.99
SSB-206ENST00000461708 BMP3P12645 472 aa21.23■□□□□ 0.99
SSB-206ENST00000461708 TAL1P17542 331 aaPredicted RBP21.23■□□□□ 0.99
SSB-206ENST00000461708 HDAC1Q13547 482 aaPredicted RBP21.23■□□□□ 0.99
SSB-206ENST00000461708 SLFN13Q68D06 897 aa21.23■□□□□ 0.99
SSB-206ENST00000461708 DEFB123Q8N688 67 aa21.23■□□□□ 0.99
SSB-206ENST00000461708 KIFC2Q96AC6 838 aa21.23■□□□□ 0.99
SSB-206ENST00000461708 EVI5LQ96CN4 794 aa21.23■□□□□ 0.99
SSB-206ENST00000461708 TSEN34Q9BSV6 310 aaKnown RBP21.23■□□□□ 0.99
SSB-206ENST00000461708 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.23■□□□□ 0.99
SSB-206ENST00000461708 FOXP2O15409 715 aa21.22■□□□□ 0.99
SSB-206ENST00000461708 PLA2G6O60733 806 aa21.22■□□□□ 0.99
SSB-206ENST00000461708 MYCNP04198 464 aaPredicted RBP21.22■□□□□ 0.99
SSB-206ENST00000461708 TRIM60Q495X7 471 aa21.22■□□□□ 0.99
SSB-206ENST00000461708 CPXCR1Q8N123 301 aa21.22■□□□□ 0.99
SSB-206ENST00000461708 LRRC47Q8N1G4 583 aaKnown RBP21.22■□□□□ 0.99
SSB-206ENST00000461708 ANAPC4Q9UJX5 808 aa21.22■□□□□ 0.99
SSB-206ENST00000461708 ADAMTS4O75173 837 aa21.21■□□□□ 0.99
SSB-206ENST00000461708 SNAI1O95863 264 aaPredicted RBP21.21■□□□□ 0.99
SSB-206ENST00000461708 AAMPQ13685 434 aa21.21■□□□□ 0.99
SSB-206ENST00000461708 FAM109BQ6ICB4 259 aaPredicted RBP21.21■□□□□ 0.99
SSB-206ENST00000461708 FAM160B2Q86V87 743 aa21.21■□□□□ 0.99
SSB-206ENST00000461708 CHURC1Q8WUH1 139 aa21.21■□□□□ 0.99
SSB-206ENST00000461708 FERMT2Q96AC1 680 aa21.21■□□□□ 0.99
SSB-206ENST00000461708 RAVER2Q9HCJ3 691 aaKnown RBP21.21■□□□□ 0.99
SSB-206ENST00000461708 FAM184BQ9ULE4 1060 aa21.21■□□□□ 0.99
SSB-206ENST00000461708 PGK1P00558 417 aa21.2■□□□□ 0.98
SSB-206ENST00000461708 STAT2P52630 851 aa21.2■□□□□ 0.98
SSB-206ENST00000461708 ALX1Q15699 326 aa21.2■□□□□ 0.98
SSB-206ENST00000461708 ANKRD45Q5TZF3 282 aa21.2■□□□□ 0.98
SSB-206ENST00000461708 ANKRD35Q8N283 1001 aa21.2■□□□□ 0.98
SSB-206ENST00000461708 STAG1Q8WVM7 1258 aa21.2■□□□□ 0.98
SSB-206ENST00000461708 ABHD16BQ9H3Z7 469 aa21.2■□□□□ 0.98
SSB-206ENST00000461708 PDLIM7Q9NR12 457 aa21.2■□□□□ 0.98
SSB-206ENST00000461708 HELLSQ9NRZ9 838 aa21.2■□□□□ 0.98
SSB-206ENST00000461708 MTMR10Q9NXD2 777 aa21.2■□□□□ 0.98
SSB-206ENST00000461708 DUSP11O75319 330 aaKnown RBP21.19■□□□□ 0.98
SSB-206ENST00000461708 FGRP09769 529 aa21.19■□□□□ 0.98
SSB-206ENST00000461708 NOVP48745 357 aa21.19■□□□□ 0.98
SSB-206ENST00000461708 PDE1AP54750 535 aa21.19■□□□□ 0.98
SSB-206ENST00000461708 TLE2Q04725 743 aa21.19■□□□□ 0.98
SSB-206ENST00000461708 STXBP5LQ9Y2K9 1186 aa21.19■□□□□ 0.98
SSB-206ENST00000461708 TACC3Q9Y6A5 838 aa21.19■□□□□ 0.98
SSB-206ENST00000461708 MCM3APO60318 1980 aa21.19■□□□□ 0.98
SSB-206ENST00000461708 A0A1W2PQ45 241 aaPredicted RBP21.18■□□□□ 0.98
SSB-206ENST00000461708 A0A1W2PQY0 241 aa21.18■□□□□ 0.98
SSB-206ENST00000461708 MOXD2PA6NHM9 499 aa21.18■□□□□ 0.98
SSB-206ENST00000461708 TMEM232C9JQI7 657 aa21.18■□□□□ 0.98
SSB-206ENST00000461708 POTEB2H3BUK9 544 aa21.18■□□□□ 0.98
SSB-206ENST00000461708 ORC4O43929 436 aa21.18■□□□□ 0.98
SSB-206ENST00000461708 SLC1A4P43007 532 aa21.18■□□□□ 0.98
SSB-206ENST00000461708 TKFCQ3LXA3 575 aa21.18■□□□□ 0.98
SSB-206ENST00000461708 KLHDC9Q8NEP7 349 aa21.18■□□□□ 0.98
SSB-206ENST00000461708 FGD4Q96M96 766 aa21.18■□□□□ 0.98
SSB-206ENST00000461708 TOX2Q96NM4 488 aa21.18■□□□□ 0.98
SSB-206ENST00000461708 CRBNQ96SW2 442 aa21.18■□□□□ 0.98
SSB-206ENST00000461708 TRIM43BA6NCK2 446 aa21.17■□□□□ 0.98
SSB-206ENST00000461708 TSPY2A6NKD2 308 aa21.17■□□□□ 0.98
SSB-206ENST00000461708 CST5P28325 142 aaPredicted RBP21.17■□□□□ 0.98
SSB-206ENST00000461708 ACLYP53396 1101 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms