RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CFPP27918 469 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 POLR2BP30876 1174 aaKnown RBP4.42□□□□□ -1.7
HDAC6-212ENST00000461608 CTSWP56202 376 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 SSRP1Q08945 709 aaKnown RBP4.42□□□□□ -1.7
HDAC6-212ENST00000461608 ANKRD39Q53RE8 183 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 TMEM67Q5HYA8 995 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 RNF187Q5TA31 235 aaPredicted RBP4.42□□□□□ -1.7
HDAC6-212ENST00000461608 PLD6Q8N2A8 252 aaKnown RBP4.42□□□□□ -1.7
HDAC6-212ENST00000461608 FAM181AQ8N9Y4 354 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 SLC26A8Q96RN1 970 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 DNAJC7Q99615 494 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 KIF2CQ99661 725 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 MKRN2Q9H000 416 aaKnown RBP4.42□□□□□ -1.7
HDAC6-212ENST00000461608 LMCD1Q9NZU5 365 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 ADAMTS6Q9UKP5 1117 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 LTBP3Q9NS15 1303 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 ANKRD62A6NC57 917 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 LEFTY1O75610 366 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 UBOX5O94941 541 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 KIR3DL1P43629 444 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 TCEAL1Q15170 157 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 TCEA2Q15560 299 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 SLC10A6Q3KNW5 377 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 NBPF12Q5TAG4 269 aaPredicted RBP4.41□□□□□ -1.7
HDAC6-212ENST00000461608 HEATR6Q6AI08 1181 aaKnown RBP4.41□□□□□ -1.7
HDAC6-212ENST00000461608 MRM1Q6IN84 353 aaKnown RBP4.41□□□□□ -1.7
HDAC6-212ENST00000461608 LETMD1Q6P1Q0 360 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 POMZP3Q6PJE2 187 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 MPZL3Q6UWV2 235 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 ZSWIM9Q86XI8 627 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 TMEM192Q8IY95 271 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 CCDC144CPQ8IYA2 1237 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 MICAL1Q8TDZ2 1067 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 RNPC3Q96LT9 517 aaKnown RBP4.41□□□□□ -1.7
HDAC6-212ENST00000461608 FEZ1Q99689 392 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 MIPEPQ99797 713 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 HAUS7Q99871 368 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 DPH2Q9BQC3 489 aaPredicted RBP4.41□□□□□ -1.7
HDAC6-212ENST00000461608 CWC22Q9HCG8 908 aaKnown RBP4.41□□□□□ -1.7
HDAC6-212ENST00000461608 PRDM10Q9NQV6 1147 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 WHRNQ9P202 907 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 ZMYM5Q9UJ78 669 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 CEP131Q9UPN4 1083 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 KDM2BQ8NHM5 1336 aa4.41□□□□□ -1.7
HDAC6-212ENST00000461608 ITGA4P13612 1032 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 FUT4P22083 530 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 RBM10P98175 930 aaKnown RBP4.4□□□□□ -1.71
HDAC6-212ENST00000461608 OGFOD3Q6PK18 319 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 DBX2Q6ZNG2 339 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 C22orf34Q6ZV56 151 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 C16orf86Q6ZW13 317 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 PPFIBP1Q86W92 1011 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 DNAJB8Q8NHS0 232 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 BAHD1Q8TBE0 780 aaPredicted RBP4.4□□□□□ -1.71
HDAC6-212ENST00000461608 ZCRB1Q8TBF4 217 aaKnown RBP4.4□□□□□ -1.71
HDAC6-212ENST00000461608 KREMEN1Q96MU8 473 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 APBA2Q99767 749 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 SPATA9Q9BWV2 254 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 BRINP2Q9C0B6 783 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 GTF2IRD1Q9UHL9 959 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 KCNH3Q9ULD8 1083 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 PLAAQ9Y263 795 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 PCDHB12Q9Y5F1 795 aa4.4□□□□□ -1.71
HDAC6-212ENST00000461608 A0A087WZG4 1122 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 FAM86C2PA6NEL3 165 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 PPM1BO75688 479 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 FAM87AP0C7U9 286 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 CD8BP10966 210 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 NBPF9Q3BBW0 867 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 ANGEL2Q5VTE6 544 aaKnown RBP4.39□□□□□ -1.71
HDAC6-212ENST00000461608 SYDE1Q6ZW31 735 aaPredicted RBP4.39□□□□□ -1.71
HDAC6-212ENST00000461608 UBE3DQ7Z6J8 389 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 KIAA0907Q7Z7F0 614 aaPredicted RBP4.39□□□□□ -1.71
HDAC6-212ENST00000461608 NETO1Q8TDF5 533 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 XAGE3Q8WTP9 111 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 PPP1R13LQ8WUF5 828 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 IPO9Q96P70 1041 aaKnown RBP4.39□□□□□ -1.71
HDAC6-212ENST00000461608 KLHL25Q9H0H3 589 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 PRDM5Q9NQX1 630 aaPredicted RBP4.39□□□□□ -1.71
HDAC6-212ENST00000461608 FANCLQ9NW38 375 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 VAV3Q9UKW4 847 aa4.39□□□□□ -1.71
HDAC6-212ENST00000461608 TPX2Q9ULW0 747 aaKnown RBP4.39□□□□□ -1.71
HDAC6-212ENST00000461608 TRAV20A0A0B4J274 112 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 NOP56O00567 594 aaKnown RBP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 PPP1R12AO14974 1030 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 CBFA2T2O43439 604 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 SLITRK5O94991 958 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 EPHX1P07099 455 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 RNASE1P07998 156 aaKnown RBP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 CD247P20963 164 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 MESP2Q0VG99 397 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 GRB10Q13322 594 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 AUHQ13825 339 aaKnown RBP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 HSP90AA2PQ14568 343 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 SV2CQ496J9 727 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 TDRD10Q5VZ19 366 aaKnown RBP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 CIAPIN1Q6FI81 312 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 TTLL10Q6ZVT0 673 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 SPATC1Q76KD6 591 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms