RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 BTBD7Q9P203 1132 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 SH2B2O14492 632 aaPredicted RBP12.94□□□□□ -0.34
APTX-209ENST00000460940 FMNL1O95466 1100 aaPredicted RBP12.94□□□□□ -0.34
APTX-209ENST00000460940 PSMA5P28066 241 aa12.94□□□□□ -0.34
APTX-209ENST00000460940 LIFRP42702 1097 aa12.94□□□□□ -0.34
APTX-209ENST00000460940 BTNL9Q6UXG8 535 aa12.94□□□□□ -0.34
APTX-209ENST00000460940 DHX32Q7L7V1 743 aaKnown RBP12.94□□□□□ -0.34
APTX-209ENST00000460940 CHST3Q7LGC8 479 aa12.94□□□□□ -0.34
APTX-209ENST00000460940 SHCBP1Q8NEM2 672 aa12.94□□□□□ -0.34
APTX-209ENST00000460940 KIFC2Q96AC6 838 aa12.94□□□□□ -0.34
APTX-209ENST00000460940 ARHGAP39Q9C0H5 1083 aa12.94□□□□□ -0.34
APTX-209ENST00000460940 SPATC1LQ9H0A9 340 aa12.94□□□□□ -0.34
APTX-209ENST00000460940 LY9Q9HBG7 655 aa12.94□□□□□ -0.34
APTX-209ENST00000460940 MTMR7Q9Y216 660 aa12.94□□□□□ -0.34
APTX-209ENST00000460940 TRIM17Q9Y577 477 aa12.94□□□□□ -0.34
APTX-209ENST00000460940 TNPO2O14787 897 aaKnown RBP12.93□□□□□ -0.34
APTX-209ENST00000460940 ATP2A1O14983 1001 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 ZBED4O75132 1171 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 OAZ1P54368 228 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 ADCK5Q3MIX3 580 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 C8orf34Q49A92 452 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 COL13A1Q5TAT6 717 aaPredicted RBP12.93□□□□□ -0.34
APTX-209ENST00000460940 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
APTX-209ENST00000460940 CATIPQ7Z7H3 387 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 CCAR1Q8IX12 1150 aaKnown RBP12.93□□□□□ -0.34
APTX-209ENST00000460940 REPS2Q8NFH8 660 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 COA7Q96BR5 231 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 JAKMIP1Q96N16 626 aaKnown RBP12.93□□□□□ -0.34
APTX-209ENST00000460940 SLC38A10Q9HBR0 1119 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 CTDP1Q9Y5B0 961 aaPredicted RBP12.93□□□□□ -0.34
APTX-209ENST00000460940 DDAH1O94760 285 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 SLC25A27O95847 323 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 PARP1P09874 1014 aaKnown RBP12.93□□□□□ -0.34
APTX-209ENST00000460940 CTGFP29279 349 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 ANAPC15P60006 121 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 TMEM132BQ14DG7 1078 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 BLOC1S2Q6QNY1 142 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 RASGRP2Q7LDG7 609 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 NAP1L5Q96NT1 182 aaPredicted RBP12.93□□□□□ -0.34
APTX-209ENST00000460940 TEX13BQ9BXU2 312 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 SRRDQ9UH36 339 aa12.93□□□□□ -0.34
APTX-209ENST00000460940 ZNF214Q9UL59 606 aaPredicted RBP12.93□□□□□ -0.34
APTX-209ENST00000460940 FRMPD2Q68DX3 1309 aaPredicted RBP12.92□□□□□ -0.34
APTX-209ENST00000460940 CAP1Q01518 475 aa12.92□□□□□ -0.34
APTX-209ENST00000460940 EXOSC10Q01780 885 aaKnown RBP12.92□□□□□ -0.34
APTX-209ENST00000460940 Q3C1V9 767 aa12.92□□□□□ -0.34
APTX-209ENST00000460940 SYDE2Q5VT97 1194 aa12.92□□□□□ -0.34
APTX-209ENST00000460940 FBXO46Q6PJ61 603 aaPredicted RBP12.92□□□□□ -0.34
APTX-209ENST00000460940 SGMS1Q86VZ5 419 aa12.92□□□□□ -0.34
APTX-209ENST00000460940 RIOX2Q8IUF8 465 aa12.92□□□□□ -0.34
APTX-209ENST00000460940 SOCS4Q8WXH5 440 aa12.92□□□□□ -0.34
APTX-209ENST00000460940 MAP3K14Q99558 947 aa12.92□□□□□ -0.34
APTX-209ENST00000460940 MOV10L1Q9BXT6 1211 aaKnown RBP12.92□□□□□ -0.34
APTX-209ENST00000460940 TM6SF1Q9BZW5 370 aa12.92□□□□□ -0.34
APTX-209ENST00000460940 MROH8Q9H579 483 aa12.92□□□□□ -0.34
APTX-209ENST00000460940 CWC22Q9HCG8 908 aaKnown RBP12.92□□□□□ -0.34
APTX-209ENST00000460940 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
APTX-209ENST00000460940 PRR12Q9ULL5 1215 aa12.92□□□□□ -0.34
APTX-209ENST00000460940 MGAMO43451 1857 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 CCDC69A6NI79 296 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 PEX10O60683 326 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 STAT3P40763 770 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 TROAPQ12815 778 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 PLS1Q14651 629 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 GRM4Q14833 912 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 NFXL1Q6ZNB6 911 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 PLEKHH3Q7Z736 793 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 MCOLN1Q9GZU1 580 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 PORCNQ9H237 461 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 GPCPD1Q9NPB8 672 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 PTPN22Q9Y2R2 807 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 ZSWIM8A7E2V4 1837 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 CALM1P0DP23 149 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 CALM2P0DP24 149 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 CALM3P0DP25 149 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 CASTP20810 708 aaKnown RBP12.91□□□□□ -0.34
APTX-209ENST00000460940 RPS6KB1P23443 525 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 COL9A3Q14050 684 aaPredicted RBP12.91□□□□□ -0.34
APTX-209ENST00000460940 GPR142Q7Z601 462 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 FBXL16Q8N461 479 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 CHMP4CQ96CF2 233 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 IL17RAQ96F46 866 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 RANBP17Q9H2T7 1088 aaKnown RBP12.91□□□□□ -0.34
APTX-209ENST00000460940 SENP2Q9HC62 589 aa12.91□□□□□ -0.34
APTX-209ENST00000460940 ERCC3P19447 782 aa12.9□□□□□ -0.34
APTX-209ENST00000460940 KIF5BP33176 963 aa12.9□□□□□ -0.34
APTX-209ENST00000460940 RCAN1P53805 252 aa12.9□□□□□ -0.34
APTX-209ENST00000460940 PRKCZQ05513 592 aa12.9□□□□□ -0.34
APTX-209ENST00000460940 IRF5Q13568 498 aa12.9□□□□□ -0.34
APTX-209ENST00000460940 SNRNP48Q6IEG0 339 aaKnown RBP12.9□□□□□ -0.34
APTX-209ENST00000460940 TTBK2Q6IQ55 1244 aa12.9□□□□□ -0.34
APTX-209ENST00000460940 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.34
APTX-209ENST00000460940 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.34
APTX-209ENST00000460940 SLC12A7Q9Y666 1083 aa12.9□□□□□ -0.34
APTX-209ENST00000460940 IVNS1ABPQ9Y6Y0 642 aa12.9□□□□□ -0.34
APTX-209ENST00000460940 ZNF236Q9UL36 1845 aa12.9□□□□□ -0.34
APTX-209ENST00000460940 COL11A1P12107 1806 aaPredicted RBP12.89□□□□□ -0.35
APTX-209ENST00000460940 PALM3A6NDB9 673 aaPredicted RBP12.89□□□□□ -0.35
APTX-209ENST00000460940 SLC15A5A6NIM6 579 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms