RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 TRIM50Q86XT4 487 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 SUGCTQ9HAC7 445 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 MLXIPQ9HAP2 919 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 LIG4P49917 911 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 ZNF654Q8IZM8 581 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 TPX2Q9ULW0 747 aaKnown RBP21.62■■□□□ 1.05
SNX27-204ENST00000458013 A0A1B0GUA9 196 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 GCKRQ14397 625 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 CCDC87Q9NVE4 849 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 RABGAP1Q9Y3P9 1069 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.62■■□□□ 1.05
SNX27-204ENST00000458013 USP17L12C9JPN9 530 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 USP17L21D6R901 530 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 SMYD4Q8IYR2 804 aaPredicted RBP21.62■■□□□ 1.05
SNX27-204ENST00000458013 CCDC127Q96BQ5 260 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 FIS1Q9Y3D6 152 aa21.62■■□□□ 1.05
SNX27-204ENST00000458013 RAPGEF6Q8TEU7 1601 aa21.61■■□□□ 1.05
SNX27-204ENST00000458013 NDUFA8P51970 172 aa21.61■■□□□ 1.05
SNX27-204ENST00000458013 XKR9Q5GH70 373 aa21.61■■□□□ 1.05
SNX27-204ENST00000458013 ABCF3Q9NUQ8 709 aa21.61■■□□□ 1.05
SNX27-204ENST00000458013 DDX25Q9UHL0 483 aaKnown RBP21.61■■□□□ 1.05
SNX27-204ENST00000458013 USH1CQ9Y6N9 552 aa21.61■■□□□ 1.05
SNX27-204ENST00000458013 DUOX2Q9NRD8 1548 aa21.61■■□□□ 1.05
SNX27-204ENST00000458013 PPP2R2CQ9Y2T4 447 aa21.61■■□□□ 1.05
SNX27-204ENST00000458013 GSPT1P15170 499 aaKnown RBP21.61■■□□□ 1.05
SNX27-204ENST00000458013 LMTK3Q96Q04 1460 aa21.61■■□□□ 1.05
SNX27-204ENST00000458013 CAPN9O14815 690 aa21.61■■□□□ 1.05
SNX27-204ENST00000458013 ADD1P35611 737 aaKnown RBP21.61■■□□□ 1.05
SNX27-204ENST00000458013 STK32BQ9NY57 414 aa21.61■■□□□ 1.05
SNX27-204ENST00000458013 XRCC5P13010 732 aaKnown RBP21.6■■□□□ 1.05
SNX27-204ENST00000458013 RASSF7Q02833 373 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 CYP4A11Q02928 519 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 POLA2Q14181 598 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 RFX1P22670 979 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 LIG3P49916 1009 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 LRRC24Q50LG9 513 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 USP28Q96RU2 1077 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 FANCLQ9NW38 375 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 NRBP1Q9UHY1 535 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 EIF2AK4Q9P2K8 1649 aaKnown RBP21.6■■□□□ 1.05
SNX27-204ENST00000458013 PPIP5K2O43314 1243 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 THAP12O43422 761 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 NLRX1Q86UT6 975 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 SMCR8Q8TEV9 937 aaPredicted RBP21.6■■□□□ 1.05
SNX27-204ENST00000458013 RTEL1Q9NZ71 1219 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 POC1B-GALNT4F8VUJ3 575 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 PIK3CAP42336 1068 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 SRGAP1Q7Z6B7 1085 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 MAD1L1Q9Y6D9 718 aa21.6■■□□□ 1.05
SNX27-204ENST00000458013 OATP04181 439 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 MTMR3Q13615 1198 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 PSTPIP2Q9H939 334 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 GSTA1P08263 222 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 GSTA2P09210 222 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 SLC12A1Q13621 1099 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 GPT2Q8TD30 523 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 ZFYVE9O95405 1425 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 LGSNQ5TDP6 509 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 SYMPKQ92797 1274 aaKnown RBP21.59■■□□□ 1.05
SNX27-204ENST00000458013 PPP4R1Q8TF05 950 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 MYOCDQ8IZQ8 938 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 VCXQ9H320 206 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 MROH5Q6ZUA9 1318 aa21.59■■□□□ 1.05
SNX27-204ENST00000458013 NCAPG2Q86XI2 1143 aa21.58■■□□□ 1.05
SNX27-204ENST00000458013 PPM1KQ8N3J5 372 aa21.58■■□□□ 1.05
SNX27-204ENST00000458013 RAB17Q9H0T7 212 aa21.58■■□□□ 1.05
SNX27-204ENST00000458013 CTSWP56202 376 aa21.58■■□□□ 1.05
SNX27-204ENST00000458013 BRDTQ58F21 947 aaPredicted RBP21.58■■□□□ 1.05
SNX27-204ENST00000458013 BLIDQ8IZY5 108 aa21.58■■□□□ 1.05
SNX27-204ENST00000458013 RASGRP4Q8TDF6 673 aa21.58■■□□□ 1.05
SNX27-204ENST00000458013 C2orf54Q08AI8 447 aa21.58■■□□□ 1.05
SNX27-204ENST00000458013 GRAMD1CQ8IYS0 662 aa21.58■■□□□ 1.05
SNX27-204ENST00000458013 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.05
SNX27-204ENST00000458013 RBBP5Q15291 538 aaKnown RBP21.58■■□□□ 1.04
SNX27-204ENST00000458013 Q3C1V9 767 aa21.58■■□□□ 1.04
SNX27-204ENST00000458013 SPICE1Q8N0Z3 855 aa21.58■■□□□ 1.04
SNX27-204ENST00000458013 PDE6CP51160 858 aa21.58■■□□□ 1.04
SNX27-204ENST00000458013 PARP10Q53GL7 1025 aa21.58■■□□□ 1.04
SNX27-204ENST00000458013 SERPINB6P35237 376 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 CCDC38Q502W7 563 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 MFSD14BQ5SR56 506 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 MRPL46Q9H2W6 279 aaKnown RBP21.57■■□□□ 1.04
SNX27-204ENST00000458013 UBN2Q6ZU65 1347 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 ITSN2Q9NZM3 1697 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 STAT1P42224 750 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 DLGAP5Q15398 846 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 A2MP01023 1474 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 SMIM24O75264 130 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 TUBBP07437 444 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 NEURL1BA8MQ27 555 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 RPSAP08865 295 aaKnown RBP21.57■■□□□ 1.04
SNX27-204ENST00000458013 TROVE2P10155 538 aaKnown RBP eCLIP21.57■■□□□ 1.04
SNX27-204ENST00000458013 ZNF445P59923 1031 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 MAP7Q14244 749 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 IFNL3Q8IZI9 196 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 MCUQ8NE86 351 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 WDR46O15213 610 aaKnown RBP21.57■■□□□ 1.04
SNX27-204ENST00000458013 RPN1P04843 607 aaKnown RBP21.57■■□□□ 1.04
SNX27-204ENST00000458013 RCN2Q14257 317 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 LRRC41Q15345 812 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms