RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 MGRN1O60291 552 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 MPP2Q14168 576 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 HAUS3Q68CZ6 603 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 MICU3Q86XE3 530 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 IGDCC4Q8TDY8 1250 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 LPIN2Q92539 896 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 TBC1D31Q96DN5 1066 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ACSBG1Q96GR2 724 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 BLZF1Q9H2G9 400 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 STRN4Q9NRL3 753 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 HYOU1Q9Y4L1 999 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 RGPD8O14715 1765 aaPredicted RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 USP31Q70CQ4 1352 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 MYO18AQ92614 2054 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 AKR1B15C9JRZ8 316 aaPredicted RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 PPIP5K2O43314 1243 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 HSP90B1P14625 803 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 LTKP29376 864 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 SKOR1P84550 965 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ITGB3BPQ13352 177 aaPredicted RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 GCKRQ14397 625 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 GRIPAP1Q4V328 841 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 AMOTL1Q8IY63 956 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ZNF507Q8TCN5 953 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ZNF473Q8WTR7 871 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ZNF274Q96GC6 653 aaPredicted RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 TSKSQ9UJT2 592 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 NFU1Q9UMS0 254 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 INHBCP55103 352 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 OS9Q13438 667 aaPredicted RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 MCMDC2Q4G0Z9 681 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ZMYM1Q5SVZ6 1142 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 BZW1Q7L1Q6 419 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 IQCA1Q86XH1 822 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ZFPM1Q8IX07 1006 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 LINS1Q8NG48 757 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 SPDL1Q96EA4 605 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 HAUS7Q99871 368 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 CSRNP2Q9H175 543 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 BCAS3Q9H6U6 928 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 VIPAS39Q9H9C1 493 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 COPRSQ9NQ92 184 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 MAP1BP46821 2468 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 SPDYE5A6NIY4 337 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 XRCC4Q13426 336 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 POSTNQ15063 836 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 COPS6Q7L5N1 327 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ANKRD18AQ8IVF6 992 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 IFT43Q96FT9 208 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ZNF317Q96PQ6 595 aaPredicted RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 PANX2Q96RD6 677 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 EPAS1Q99814 870 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 LLPHQ9BRT6 129 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 CENPHQ9H3R5 247 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 VEZTQ9HBM0 779 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 C9orf78Q9NZ63 289 aaPredicted RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 G3BP2Q9UN86 482 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 KNL1Q8NG31 2342 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 LRP5O75197 1615 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 UTYO14607 1347 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 CTAGE15A4D2H0 777 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 NEURL1BA8MQ27 555 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 GNAT3A8MTJ3 354 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 TP73O15350 636 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 CSF1RP07333 972 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 CTAGE8P0CG41 777 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 SAFBQ15424 915 aaKnown RBP eCLIP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 SLC35G1Q2M3R5 365 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 NBPF20Q3BBV1 942 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 TYW1BQ6NUM6 668 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 CTAGE6Q86UF2 777 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ERICH1Q86X53 443 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 CTAGE4Q8IX94 777 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 RASSF8Q8NHQ8 419 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 STAG1Q8WVM7 1258 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ZNF496Q96IT1 587 aaPredicted RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 PURBQ96QR8 312 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 DUSP9Q99956 384 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 ZKSCAN3Q9BRR0 538 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 UBE2OQ9C0C9 1292 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 PPANQ9NQ55 473 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 NKX1-2Q9UD57 310 aaPredicted RBP5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 CSMD2Q7Z408 3487 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 GOLGA6BA6NDN3 693 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 ECEL1O95672 775 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 SPATA31D3P0C874 917 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 ITGA4P13612 1032 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 ERVK-9P63128 1117 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 CDC37Q16543 378 aaPredicted RBP5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 PTGISQ16647 500 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 GBP6Q6ZN66 633 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 SPATA31D4Q6ZUB0 917 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 PALB2Q86YC2 1186 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 TEX11Q8IYF3 940 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 MAB21L3Q8N8X9 362 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 SLC17A8Q8NDX2 589 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 KCNG4Q8TDN1 519 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 MICAL1Q8TDZ2 1067 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms