RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 SH2B2O14492 632 aaPredicted RBP17.21■□□□□ 0.35
CLCN1-203ENST00000455478 HOXD10P28358 340 aa17.21■□□□□ 0.35
CLCN1-203ENST00000455478 MAPK4P31152 587 aa17.21■□□□□ 0.35
CLCN1-203ENST00000455478 SLC16A2P36021 539 aa17.21■□□□□ 0.35
CLCN1-203ENST00000455478 CCNA1P78396 465 aa17.21■□□□□ 0.35
CLCN1-203ENST00000455478 C8orf34Q49A92 452 aa17.21■□□□□ 0.35
CLCN1-203ENST00000455478 DHX32Q7L7V1 743 aaKnown RBP17.21■□□□□ 0.35
CLCN1-203ENST00000455478 LRRC2Q9BYS8 371 aa17.21■□□□□ 0.35
CLCN1-203ENST00000455478 SLC38A10Q9HBR0 1119 aa17.21■□□□□ 0.35
CLCN1-203ENST00000455478 GJD2Q9UKL4 321 aa17.21■□□□□ 0.35
CLCN1-203ENST00000455478 ZNF214Q9UL59 606 aaPredicted RBP17.21■□□□□ 0.35
CLCN1-203ENST00000455478 PRR12Q9ULL5 1215 aa17.21■□□□□ 0.35
CLCN1-203ENST00000455478 GABRQQ9UN88 632 aa17.21■□□□□ 0.35
CLCN1-203ENST00000455478 WDR19Q8NEZ3 1342 aa17.21■□□□□ 0.34
CLCN1-203ENST00000455478 ZBED4O75132 1171 aa17.2■□□□□ 0.34
CLCN1-203ENST00000455478 GOLGA8HP0CJ92 632 aa17.2■□□□□ 0.34
CLCN1-203ENST00000455478 CPA1P15085 419 aa17.2■□□□□ 0.34
CLCN1-203ENST00000455478 STAT3P40763 770 aa17.2■□□□□ 0.34
CLCN1-203ENST00000455478 IKQ13123 557 aaPredicted RBP17.2■□□□□ 0.34
CLCN1-203ENST00000455478 PLS1Q14651 629 aa17.2■□□□□ 0.34
CLCN1-203ENST00000455478 FBXO46Q6PJ61 603 aaPredicted RBP17.2■□□□□ 0.34
CLCN1-203ENST00000455478 TNS4Q8IZW8 715 aa17.2■□□□□ 0.34
CLCN1-203ENST00000455478 COA7Q96BR5 231 aa17.2■□□□□ 0.34
CLCN1-203ENST00000455478 TCEANC2Q96MN5 208 aa17.2■□□□□ 0.34
CLCN1-203ENST00000455478 JAKMIP1Q96N16 626 aaKnown RBP17.2■□□□□ 0.34
CLCN1-203ENST00000455478 PLXNB2O15031 1838 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 ATP2A1O14983 1001 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
CLCN1-203ENST00000455478 FDX1P10109 184 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 LIFRP42702 1097 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 PRMT2P55345 433 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 PRKCZQ05513 592 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 TROAPQ12815 778 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 GPATCH4Q5T3I0 446 aaKnown RBP17.19■□□□□ 0.34
CLCN1-203ENST00000455478 SYDE2Q5VT97 1194 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 GPR142Q7Z601 462 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 PLEKHH3Q7Z736 793 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 RIOX2Q8IUF8 465 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 TMTC2Q8N394 836 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 SHCBP1Q8NEM2 672 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 PTCH2Q9Y6C5 1203 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 HTTP42858 3142 aa17.19■□□□□ 0.34
CLCN1-203ENST00000455478 EIF5BO60841 1220 aaKnown RBP17.18■□□□□ 0.34
CLCN1-203ENST00000455478 PARP1P09874 1014 aaKnown RBP17.18■□□□□ 0.34
CLCN1-203ENST00000455478 ERCC3P19447 782 aa17.18■□□□□ 0.34
CLCN1-203ENST00000455478 FLT3LGP49771 235 aa17.18■□□□□ 0.34
CLCN1-203ENST00000455478 SNAP25P60880 206 aa17.18■□□□□ 0.34
CLCN1-203ENST00000455478 ASPRV1Q53RT3 343 aa17.18■□□□□ 0.34
CLCN1-203ENST00000455478 CCAR1Q8IX12 1150 aaKnown RBP17.18■□□□□ 0.34
CLCN1-203ENST00000455478 CPXCR1Q8N123 301 aa17.18■□□□□ 0.34
CLCN1-203ENST00000455478 STAG2Q8N3U4 1231 aa17.18■□□□□ 0.34
CLCN1-203ENST00000455478 UBA5Q9GZZ9 404 aa17.18■□□□□ 0.34
CLCN1-203ENST00000455478 CPVLQ9H3G5 476 aa17.18■□□□□ 0.34
CLCN1-203ENST00000455478 RAVER2Q9HCJ3 691 aaKnown RBP17.18■□□□□ 0.34
CLCN1-203ENST00000455478 MAD2L2Q9UI95 211 aa17.18■□□□□ 0.34
CLCN1-203ENST00000455478 RIPK3Q9Y572 518 aa17.18■□□□□ 0.34
CLCN1-203ENST00000455478 ZNF536O15090 1300 aa17.18■□□□□ 0.34
CLCN1-203ENST00000455478 PALM3A6NDB9 673 aaPredicted RBP17.17■□□□□ 0.34
CLCN1-203ENST00000455478 SMCHD1A6NHR9 2005 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 SLC25A27O95847 323 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 PTPREP23469 700 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 OAZ1P54368 228 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 GRM4Q14833 912 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 MORN1Q5T089 497 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 BLOC1S2Q6QNY1 142 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 CATIPQ7Z7H3 387 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 SGMS1Q86VZ5 419 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 NCAPG2Q86XI2 1143 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 ZNF654Q8IZM8 581 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 USP6NLQ92738 828 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 TEX13BQ9BXU2 312 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 RANBP17Q9H2T7 1088 aaKnown RBP17.17■□□□□ 0.34
CLCN1-203ENST00000455478 MROH8Q9H579 483 aa17.17■□□□□ 0.34
CLCN1-203ENST00000455478 CTDP1Q9Y5B0 961 aaPredicted RBP17.17■□□□□ 0.34
CLCN1-203ENST00000455478 RPS6KB1P23443 525 aa17.16■□□□□ 0.34
CLCN1-203ENST00000455478 PSMA5P28066 241 aa17.16■□□□□ 0.34
CLCN1-203ENST00000455478 IRF5Q13568 498 aa17.16■□□□□ 0.34
CLCN1-203ENST00000455478 WDR78Q5VTH9 848 aa17.16■□□□□ 0.34
CLCN1-203ENST00000455478 SNRNP48Q6IEG0 339 aaKnown RBP17.16■□□□□ 0.34
CLCN1-203ENST00000455478 NFXL1Q6ZNB6 911 aa17.16■□□□□ 0.34
CLCN1-203ENST00000455478 AGBL1Q96MI9 1066 aa17.16■□□□□ 0.34
CLCN1-203ENST00000455478 MYL10Q9BUA6 226 aa17.16■□□□□ 0.34
CLCN1-203ENST00000455478 TM6SF1Q9BZW5 370 aa17.16■□□□□ 0.34
CLCN1-203ENST00000455478 ZSWIM6Q9HCJ5 1215 aa17.16■□□□□ 0.34
CLCN1-203ENST00000455478 HPS5Q9UPZ3 1129 aa17.16■□□□□ 0.34
CLCN1-203ENST00000455478 ZNFX1Q9P2E3 1918 aaKnown RBP17.15■□□□□ 0.34
CLCN1-203ENST00000455478 CCDC69A6NI79 296 aa17.15■□□□□ 0.34
CLCN1-203ENST00000455478 SLC15A5A6NIM6 579 aa17.15■□□□□ 0.34
CLCN1-203ENST00000455478 KLRF2D3W0D1 207 aa17.15■□□□□ 0.34
CLCN1-203ENST00000455478 STRNO43815 780 aa17.15■□□□□ 0.34
CLCN1-203ENST00000455478 DDAH1O94760 285 aa17.15■□□□□ 0.34
CLCN1-203ENST00000455478 CASTP20810 708 aaKnown RBP17.15■□□□□ 0.34
CLCN1-203ENST00000455478 CCDC174Q6PII3 467 aa17.15■□□□□ 0.34
CLCN1-203ENST00000455478 ADGRF4Q8IZF3 695 aa17.15■□□□□ 0.34
CLCN1-203ENST00000455478 RAET1EQ8TD07 263 aa17.15■□□□□ 0.34
CLCN1-203ENST00000455478 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
CLCN1-203ENST00000455478 NUDT12Q9BQG2 462 aa17.15■□□□□ 0.34
CLCN1-203ENST00000455478 CWC22Q9HCG8 908 aaKnown RBP17.15■□□□□ 0.34
CLCN1-203ENST00000455478 BAZ2BQ9UIF8 2168 aaKnown RBP17.15■□□□□ 0.34
CLCN1-203ENST00000455478 COPB2P35606 906 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms