RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 RASSF10A6NK89 507 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 USP17L15C9J2P7 530 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 USP17L13C9JLJ4 530 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 USP17L11C9JVI0 530 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 USP17L18D6R9N7 530 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 USP17L22D6RA61 530 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 USP17L17D6RBQ6 530 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 USP17L19D6RCP7 530 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 USP17L20D6RJB6 530 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 PRPF3O43395 683 aaKnown RBP19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 HSP90AA1P07900 732 aaKnown RBP19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 FDPSP14324 419 aaKnown RBP19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 SLC16A2P36021 539 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 USP17L24Q0WX57 530 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 MKRN3Q13064 507 aaKnown RBP19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 SYDE2Q5VT97 1194 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 GPAT2Q6NUI2 795 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 GADL1Q6ZQY3 521 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 ADGRF4Q8IZF3 695 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 TANGO6Q9C0B7 1094 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 RBM27Q9P2N5 1060 aaKnown RBP19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 SMC3Q9UQE7 1217 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 MYH6P13533 1939 aa19.24■□□□□ 0.67
CCDC90B-202ENST00000455220 TESPA1A2RU30 521 aaPredicted RBP19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 SSRP1Q08945 709 aaKnown RBP19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 TRIM22Q8IYM9 498 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 BRI3BPQ8WY22 251 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 SLF1Q9BQI6 1058 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 SLC26A6Q9BXS9 759 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 JMJD4Q9H9V9 463 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 FBXO28Q9NVF7 368 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 PPP1R9AQ9ULJ8 1098 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 PRR12Q9ULL5 1215 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 CEP350Q5VT06 3117 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 CCL15-CCL14A0A0B4J2E2 113 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 DTNBO60941 627 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 IKQ13123 557 aaPredicted RBP19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 CCL15Q16663 113 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 PRPF38AQ8NAV1 312 aaKnown RBP19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 FOXD4L1Q9NU39 408 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 ORC3Q9UBD5 711 aaPredicted RBP19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 DAXXQ9UER7 740 aaPredicted RBP19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 V9GY48 417 aaPredicted RBP19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 MYPNQ86TC9 1320 aa19.23■□□□□ 0.67
CCDC90B-202ENST00000455220 MANSC4A6NHS7 340 aaPredicted RBP19.22■□□□□ 0.67
CCDC90B-202ENST00000455220 PPFIA3O75145 1194 aa19.22■□□□□ 0.67
CCDC90B-202ENST00000455220 FLOT1O75955 427 aa19.22■□□□□ 0.67
CCDC90B-202ENST00000455220 DEXIO95424 95 aa19.22■□□□□ 0.67
CCDC90B-202ENST00000455220 GJB2P29033 226 aa19.22■□□□□ 0.67
CCDC90B-202ENST00000455220 PKN1Q16512 942 aa19.22■□□□□ 0.67
CCDC90B-202ENST00000455220 DDX11Q96FC9 970 aa19.22■□□□□ 0.67
CCDC90B-202ENST00000455220 SLC45A1Q9Y2W3 748 aa19.22■□□□□ 0.67
CCDC90B-202ENST00000455220 DSG3P32926 999 aa19.21■□□□□ 0.67
CCDC90B-202ENST00000455220 AKAP17AQ02040 695 aaKnown RBP19.21■□□□□ 0.67
CCDC90B-202ENST00000455220 PABPC4Q13310 644 aaKnown RBP eCLIP19.21■□□□□ 0.67
CCDC90B-202ENST00000455220 COG2Q14746 738 aa19.21■□□□□ 0.67
CCDC90B-202ENST00000455220 DEFB115Q30KQ5 88 aa19.21■□□□□ 0.67
CCDC90B-202ENST00000455220 SPRYD3Q8NCJ5 442 aa19.21■□□□□ 0.67
CCDC90B-202ENST00000455220 RRP36Q96EU6 259 aaKnown RBP19.21■□□□□ 0.67
CCDC90B-202ENST00000455220 RANBP17Q9H2T7 1088 aaKnown RBP19.21■□□□□ 0.67
CCDC90B-202ENST00000455220 ADAMTS5Q9UNA0 930 aa19.21■□□□□ 0.67
CCDC90B-202ENST00000455220 BTBD19C9JJ37 291 aa19.2■□□□□ 0.66
CCDC90B-202ENST00000455220 PFKFB3Q16875 520 aaPredicted RBP19.2■□□□□ 0.66
CCDC90B-202ENST00000455220 ANKRD23Q86SG2 305 aa19.2■□□□□ 0.66
CCDC90B-202ENST00000455220 KIFC2Q96AC6 838 aa19.2■□□□□ 0.66
CCDC90B-202ENST00000455220 PIGSQ96S52 555 aa19.2■□□□□ 0.66
CCDC90B-202ENST00000455220 CWC22Q9HCG8 908 aaKnown RBP19.2■□□□□ 0.66
CCDC90B-202ENST00000455220 VAT1LQ9HCJ6 419 aa19.2■□□□□ 0.66
CCDC90B-202ENST00000455220 A0A0G2JMZ2 1700 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 hCG_1642624A0A1W2PR95 340 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 ZBTB5O15062 677 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 FDX1P10109 184 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 CDC37Q16543 378 aaPredicted RBP19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 CYP4F22Q6NT55 531 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 WASF1Q92558 559 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 PTPN18Q99952 460 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 HOXC10Q9NYD6 342 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 SEC63Q9UGP8 760 aaKnown RBP19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 KIF3AQ9Y496 699 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 PNMA6FA0A0J9YX94 578 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 SPDYE16A6NNV3 312 aaPredicted RBP19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 SCG2P13521 617 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 INHBEP58166 350 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 QRICH1Q2TAL8 776 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 LBX2Q6XYB7 198 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 HOMER1Q86YM7 354 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 FAM184AQ8NB25 1140 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 ATG4CQ96DT6 458 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 ASCC2Q9H1I8 757 aaPredicted RBP19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 SLC38A10Q9HBR0 1119 aa19.19■□□□□ 0.66
CCDC90B-202ENST00000455220 VWA5AO00534 786 aa19.18■□□□□ 0.66
CCDC90B-202ENST00000455220 DDIT3P35638 169 aa19.18■□□□□ 0.66
CCDC90B-202ENST00000455220 IRX3P78415 501 aaPredicted RBP19.18■□□□□ 0.66
CCDC90B-202ENST00000455220 FAM43AQ8N2R8 423 aa19.18■□□□□ 0.66
CCDC90B-202ENST00000455220 PIBF1Q8WXW3 757 aa19.18■□□□□ 0.66
CCDC90B-202ENST00000455220 ZCCHC17Q9NP64 241 aaKnown RBP19.18■□□□□ 0.66
CCDC90B-202ENST00000455220 PNMA3Q9UL41 463 aa19.18■□□□□ 0.66
CCDC90B-202ENST00000455220 hCG_1984214I3L0E3 225 aa19.17■□□□□ 0.66
CCDC90B-202ENST00000455220 PDHXO00330 501 aa19.17■□□□□ 0.66
CCDC90B-202ENST00000455220 PPP1R11O60927 126 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms