RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 GOLGA8HP0CJ92 632 aa13.06□□□□□ -0.32
TRAF4-206ENST00000454852 PABPC4Q13310 644 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAF4-206ENST00000454852 DGKZQ13574 1117 aa13.06□□□□□ -0.32
TRAF4-206ENST00000454852 ZYXQ15942 572 aaKnown RBP13.06□□□□□ -0.32
TRAF4-206ENST00000454852 TTBK2Q6IQ55 1244 aa13.06□□□□□ -0.32
TRAF4-206ENST00000454852 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
TRAF4-206ENST00000454852 ANKRD23Q86SG2 305 aa13.06□□□□□ -0.32
TRAF4-206ENST00000454852 PRPF38AQ8NAV1 312 aaKnown RBP13.06□□□□□ -0.32
TRAF4-206ENST00000454852 IPO9Q96P70 1041 aaKnown RBP13.06□□□□□ -0.32
TRAF4-206ENST00000454852 NUP88Q99567 741 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-206ENST00000454852 JMJD4Q9H9V9 463 aa13.06□□□□□ -0.32
TRAF4-206ENST00000454852 PPP1R9AQ9ULJ8 1098 aa13.06□□□□□ -0.32
TRAF4-206ENST00000454852 ABT1Q9ULW3 272 aaKnown RBP13.06□□□□□ -0.32
TRAF4-206ENST00000454852 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-206ENST00000454852 PTPDC1A2A3K4 754 aa13.05□□□□□ -0.32
TRAF4-206ENST00000454852 DEXIO95424 95 aa13.05□□□□□ -0.32
TRAF4-206ENST00000454852 FDPSP14324 419 aaKnown RBP13.05□□□□□ -0.32
TRAF4-206ENST00000454852 COG2Q14746 738 aa13.05□□□□□ -0.32
TRAF4-206ENST00000454852 TREML2Q5T2D2 321 aa13.05□□□□□ -0.32
TRAF4-206ENST00000454852 SYDE2Q5VT97 1194 aa13.05□□□□□ -0.32
TRAF4-206ENST00000454852 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-206ENST00000454852 TRIM22Q8IYM9 498 aa13.05□□□□□ -0.32
TRAF4-206ENST00000454852 BRI3BPQ8WY22 251 aa13.05□□□□□ -0.32
TRAF4-206ENST00000454852 SLF1Q9BQI6 1058 aa13.05□□□□□ -0.32
TRAF4-206ENST00000454852 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
TRAF4-206ENST00000454852 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
TRAF4-206ENST00000454852 PRR12Q9ULL5 1215 aa13.05□□□□□ -0.32
TRAF4-206ENST00000454852 THSD7BQ9C0I4 1608 aa13.05□□□□□ -0.32
TRAF4-206ENST00000454852 CCL15-CCL14A0A0B4J2E2 113 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 hCG_1984214I3L0E3 225 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
TRAF4-206ENST00000454852 DSG3P32926 999 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 SSRP1Q08945 709 aaKnown RBP13.04□□□□□ -0.32
TRAF4-206ENST00000454852 NOGQ13253 232 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 CCL15Q16663 113 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 TEX2Q8IWB9 1127 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 ADGRF4Q8IZF3 695 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 ZNF713Q8N859 430 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-206ENST00000454852 UBA5Q9GZZ9 404 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 CWC22Q9HCG8 908 aaKnown RBP13.04□□□□□ -0.32
TRAF4-206ENST00000454852 HOXC10Q9NYD6 342 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 PNMA2Q9UL42 364 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 MTMR7Q9Y216 660 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
TRAF4-206ENST00000454852 PNMA6FA0A0J9YX94 578 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 ATP2A1O14983 1001 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 ZBTB5O15062 677 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 RAD21O60216 631 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 JAK2O60674 1132 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 FLOT1O75955 427 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 SLC16A2P36021 539 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 TM4SF4P48230 202 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 OAZ1P54368 228 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 TRAF1Q13077 416 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 PKN1Q16512 942 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 PFKFB3Q16875 520 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-206ENST00000454852 GADL1Q6ZQY3 521 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 CMTR1Q8N1G2 835 aaKnown RBP13.03□□□□□ -0.32
TRAF4-206ENST00000454852 REPS2Q8NFH8 660 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 GTF3C2Q8WUA4 911 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-206ENST00000454852 WASF1Q92558 559 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 PHKBQ93100 1093 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 RRP36Q96EU6 259 aaKnown RBP13.03□□□□□ -0.32
TRAF4-206ENST00000454852 SLC26A6Q9BXS9 759 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 SLC38A10Q9HBR0 1119 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 FBXO28Q9NVF7 368 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 PNMA3Q9UL41 463 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 SMC3Q9UQE7 1217 aa13.03□□□□□ -0.32
TRAF4-206ENST00000454852 V9GY48 417 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-206ENST00000454852 MYH6P13533 1939 aa13.02□□□□□ -0.32
TRAF4-206ENST00000454852 SPDYE16A6NNV3 312 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-206ENST00000454852 BTBD19C9JJ37 291 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 SCG2P13521 617 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 OSBPP22059 807 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 GJB2P29033 226 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 DDIT3P35638 169 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.33
TRAF4-206ENST00000454852 SREBF2Q12772 1141 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 MB21D1Q8N884 522 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 PIGSQ96S52 555 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 PTPN18Q99952 460 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 MAF1Q9H063 256 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 ASCC2Q9H1I8 757 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-206ENST00000454852 CPVLQ9H3G5 476 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 SH3GLB2Q9NR46 395 aa13.02□□□□□ -0.33
TRAF4-206ENST00000454852 ORC3Q9UBD5 711 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-206ENST00000454852 VWA5AO00534 786 aa13.01□□□□□ -0.33
TRAF4-206ENST00000454852 HSP90AA1P07900 732 aaKnown RBP13.01□□□□□ -0.33
TRAF4-206ENST00000454852 PDCP20941 246 aa13.01□□□□□ -0.33
TRAF4-206ENST00000454852 CDC37Q16543 378 aaPredicted RBP13.01□□□□□ -0.33
TRAF4-206ENST00000454852 QRICH1Q2TAL8 776 aa13.01□□□□□ -0.33
TRAF4-206ENST00000454852 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
TRAF4-206ENST00000454852 FAM43AQ8N2R8 423 aa13.01□□□□□ -0.33
TRAF4-206ENST00000454852 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
TRAF4-206ENST00000454852 CAPNS2Q96L46 248 aa13.01□□□□□ -0.33
TRAF4-206ENST00000454852 SEC63Q9UGP8 760 aaKnown RBP13.01□□□□□ -0.33
TRAF4-206ENST00000454852 ZNF536O15090 1300 aa13.01□□□□□ -0.33
TRAF4-206ENST00000454852 ADGRA2Q96PE1 1338 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms