RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 CCDC171Q6TFL3 1326 aa19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 CYBAP13498 195 aa19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 PRAMEF19Q5SWL8 479 aa19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 SNRNP48Q6IEG0 339 aaKnown RBP19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 TICAM2Q86XR7 235 aa19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 MAML3Q96JK9 1138 aa19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 TEX13BQ9BXU2 312 aa19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 TOMM22Q9NS69 142 aa19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 FEM1BQ9UK73 627 aa19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 STX8Q9UNK0 236 aa19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 RIPK3Q9Y572 518 aa19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 ZNFX1Q9P2E3 1918 aaKnown RBP19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 FRMPD3Q5JV73 1810 aa19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 PFASO15067 1338 aa19.5■□□□□ 0.71
NCKIPSD-208ENST00000454134 ZBED4O75132 1171 aa19.49■□□□□ 0.71
NCKIPSD-208ENST00000454134 BMP3P12645 472 aa19.49■□□□□ 0.71
NCKIPSD-208ENST00000454134 HAND2P61296 217 aa19.49■□□□□ 0.71
NCKIPSD-208ENST00000454134 KCTD2Q14681 263 aa19.49■□□□□ 0.71
NCKIPSD-208ENST00000454134 RRP12Q5JTH9 1297 aaKnown RBP19.49■□□□□ 0.71
NCKIPSD-208ENST00000454134 ANO1Q5XXA6 986 aa19.49■□□□□ 0.71
NCKIPSD-208ENST00000454134 C7orf61Q8IZ16 206 aa19.49■□□□□ 0.71
NCKIPSD-208ENST00000454134 RAVER2Q9HCJ3 691 aaKnown RBP19.49■□□□□ 0.71
NCKIPSD-208ENST00000454134 CTDP1Q9Y5B0 961 aaPredicted RBP19.49■□□□□ 0.71
NCKIPSD-208ENST00000454134 ORC4O43929 436 aa19.48■□□□□ 0.71
NCKIPSD-208ENST00000454134 MCCP23508 829 aa19.48■□□□□ 0.71
NCKIPSD-208ENST00000454134 RASGRP2Q7LDG7 609 aa19.48■□□□□ 0.71
NCKIPSD-208ENST00000454134 MTMR7Q9Y216 660 aa19.48■□□□□ 0.71
NCKIPSD-208ENST00000454134 TMEM232C9JQI7 657 aa19.47■□□□□ 0.71
NCKIPSD-208ENST00000454134 FGRP09769 529 aa19.47■□□□□ 0.71
NCKIPSD-208ENST00000454134 COL6A1P12109 1028 aa19.47■□□□□ 0.71
NCKIPSD-208ENST00000454134 COPB2P35606 906 aa19.47■□□□□ 0.71
NCKIPSD-208ENST00000454134 ZNF792Q3KQV3 632 aa19.47■□□□□ 0.71
NCKIPSD-208ENST00000454134 CWC27Q6UX04 472 aaKnown RBP19.47■□□□□ 0.71
NCKIPSD-208ENST00000454134 SLC38A10Q9HBR0 1119 aa19.47■□□□□ 0.71
NCKIPSD-208ENST00000454134 RBM27Q9P2N5 1060 aaKnown RBP19.47■□□□□ 0.71
NCKIPSD-208ENST00000454134 MSCO60682 206 aa19.46■□□□□ 0.71
NCKIPSD-208ENST00000454134 PDE4AP27815 886 aa19.46■□□□□ 0.71
NCKIPSD-208ENST00000454134 SLC1A4P43007 532 aa19.46■□□□□ 0.71
NCKIPSD-208ENST00000454134 IKQ13123 557 aaPredicted RBP19.46■□□□□ 0.71
NCKIPSD-208ENST00000454134 KCTD1Q719H9 257 aa19.46■□□□□ 0.71
NCKIPSD-208ENST00000454134 GMCL1Q96IK5 515 aa19.46■□□□□ 0.71
NCKIPSD-208ENST00000454134 DIAPH3Q9NSV4 1193 aa19.46■□□□□ 0.71
NCKIPSD-208ENST00000454134 ZMYND8Q9ULU4 1186 aaPredicted RBP19.46■□□□□ 0.71
NCKIPSD-208ENST00000454134 PLXNA1Q9UIW2 1896 aa19.45■□□□□ 0.7
NCKIPSD-208ENST00000454134 ATP2A1O14983 1001 aa19.45■□□□□ 0.7
NCKIPSD-208ENST00000454134 STAT2P52630 851 aa19.45■□□□□ 0.7
NCKIPSD-208ENST00000454134 PPP4R3BQ5MIZ7 849 aa19.45■□□□□ 0.7
NCKIPSD-208ENST00000454134 TBC1D10CQ8IV04 446 aa19.45■□□□□ 0.7
NCKIPSD-208ENST00000454134 ZMYM6O95789 1325 aa19.45■□□□□ 0.7
NCKIPSD-208ENST00000454134 SEPT4O43236 478 aa19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 MYCNP04198 464 aaPredicted RBP19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 NOVP48745 357 aa19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 MFAP1P55081 439 aaKnown RBP19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 SNAP25P60880 206 aa19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 LRRC26Q2I0M4 334 aa19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 GJC2Q5T442 439 aaPredicted RBP19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 CHURC1Q8WUH1 139 aa19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 STAG1Q8WVM7 1258 aa19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 DDX11Q96FC9 970 aa19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 TINF2Q9BSI4 451 aa19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 SENP6Q9GZR1 1112 aaPredicted RBP19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 HOMER2Q9NSB8 354 aa19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 PCDH10Q9P2E7 1040 aa19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 DIS3Q9Y2L1 958 aaKnown RBP19.44■□□□□ 0.7
NCKIPSD-208ENST00000454134 TAL1P17542 331 aaPredicted RBP19.43■□□□□ 0.7
NCKIPSD-208ENST00000454134 SYN1P17600 705 aa19.43■□□□□ 0.7
NCKIPSD-208ENST00000454134 FXR1P51114 621 aaKnown RBP eCLIP19.43■□□□□ 0.7
NCKIPSD-208ENST00000454134 AKNAD1Q5T1N1 836 aa19.43■□□□□ 0.7
NCKIPSD-208ENST00000454134 RCSD1Q6JBY9 416 aa19.43■□□□□ 0.7
NCKIPSD-208ENST00000454134 FAM160B2Q86V87 743 aa19.43■□□□□ 0.7
NCKIPSD-208ENST00000454134 PRO3102Q9H379 93 aa19.43■□□□□ 0.7
NCKIPSD-208ENST00000454134 DNAJC25-GNG10A0A024R161 153 aa19.42■□□□□ 0.7
NCKIPSD-208ENST00000454134 DNM1LO00429 736 aa19.42■□□□□ 0.7
NCKIPSD-208ENST00000454134 OAZ1P54368 228 aa19.42■□□□□ 0.7
NCKIPSD-208ENST00000454134 CCDC96Q2M329 555 aa19.42■□□□□ 0.7
NCKIPSD-208ENST00000454134 MFSD6Q6ZSS7 791 aa19.42■□□□□ 0.7
NCKIPSD-208ENST00000454134 AGBL1Q96MI9 1066 aa19.42■□□□□ 0.7
NCKIPSD-208ENST00000454134 TMEM47Q9BQJ4 181 aa19.42■□□□□ 0.7
NCKIPSD-208ENST00000454134 TRIOBPQ9H2D6 2365 aa19.41■□□□□ 0.7
NCKIPSD-208ENST00000454134 HIP1O00291 1037 aa19.41■□□□□ 0.7
NCKIPSD-208ENST00000454134 GSPT1P15170 499 aaKnown RBP19.41■□□□□ 0.7
NCKIPSD-208ENST00000454134 ATN1P54259 1190 aaPredicted RBP19.41■□□□□ 0.7
NCKIPSD-208ENST00000454134 CCDC174Q6PII3 467 aa19.41■□□□□ 0.7
NCKIPSD-208ENST00000454134 ANKRD35Q8N283 1001 aa19.41■□□□□ 0.7
NCKIPSD-208ENST00000454134 ARRDC4Q8NCT1 418 aa19.41■□□□□ 0.7
NCKIPSD-208ENST00000454134 PRR12Q9ULL5 1215 aa19.41■□□□□ 0.7
NCKIPSD-208ENST00000454134 ZNF536O15090 1300 aa19.41■□□□□ 0.7
NCKIPSD-208ENST00000454134 NEDD4P46934 1319 aa19.41■□□□□ 0.7
NCKIPSD-208ENST00000454134 ZNF213O14771 459 aa19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 PLA2G6O60733 806 aa19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 FDX1P10109 184 aa19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 TOP1P11387 765 aaKnown RBP19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 SLC16A2P36021 539 aa19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 TTC22Q5TAA0 569 aa19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 TTBK2Q6IQ55 1244 aa19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 CHST13Q8NET6 341 aa19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 DCAF4Q8WV16 495 aa19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 IL25Q9H293 177 aa19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 TCP11L1Q9NUJ3 509 aa19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 FBXO40Q9UH90 709 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms