RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 VGLL2Q8N8G2 317 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 TRIM47Q96LD4 638 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 PHF20Q9BVI0 1012 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 CAPS2Q9BXY5 557 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 MLXIPQ9HAP2 919 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 ADAMTS7Q9UKP4 1686 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 LRRC10BA6NIK2 292 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 EBAG9O00559 213 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 SEMA3EO15041 775 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 TUBB4BP68371 445 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 PDXDC2PQ6P474 469 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
LMBR1-213ENST00000454132 VIPAS39Q9H9C1 493 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 LRP2BPQ9P2M1 347 aa21.98■■□□□ 1.11
LMBR1-213ENST00000454132 A0A087WUV0 522 aaPredicted RBP21.97■■□□□ 1.11
LMBR1-213ENST00000454132 ZEB2O60315 1214 aa21.97■■□□□ 1.11
LMBR1-213ENST00000454132 XBP1P17861 261 aa21.97■■□□□ 1.11
LMBR1-213ENST00000454132 MNAT1P51948 309 aa21.97■■□□□ 1.11
LMBR1-213ENST00000454132 PDCLQ13371 301 aa21.97■■□□□ 1.11
LMBR1-213ENST00000454132 ADGRA1Q86SQ6 560 aa21.97■■□□□ 1.11
LMBR1-213ENST00000454132 NHEJ1Q9H9Q4 299 aaPredicted RBP21.97■■□□□ 1.11
LMBR1-213ENST00000454132 LRWD1Q9UFC0 647 aa21.97■■□□□ 1.11
LMBR1-213ENST00000454132 CTSWP56202 376 aa21.97■■□□□ 1.11
LMBR1-213ENST00000454132 ZCRB1Q8TBF4 217 aaKnown RBP21.97■■□□□ 1.11
LMBR1-213ENST00000454132 NACAP1Q9BZK3 213 aa21.97■■□□□ 1.11
LMBR1-213ENST00000454132 ENAHQ8N8S7 591 aaPredicted RBP21.96■■□□□ 1.11
LMBR1-213ENST00000454132 TSEN2Q8NCE0 465 aaKnown RBP21.96■■□□□ 1.11
LMBR1-213ENST00000454132 LAMB4A4D0S4 1761 aa21.96■■□□□ 1.11
LMBR1-213ENST00000454132 NCK2O43639 380 aa21.96■■□□□ 1.11
LMBR1-213ENST00000454132 KRT86O43790 486 aa21.96■■□□□ 1.11
LMBR1-213ENST00000454132 CCDC96Q2M329 555 aa21.96■■□□□ 1.11
LMBR1-213ENST00000454132 ANKRD18AQ8IVF6 992 aa21.96■■□□□ 1.11
LMBR1-213ENST00000454132 STAG1Q8WVM7 1258 aa21.96■■□□□ 1.11
LMBR1-213ENST00000454132 ASAP1Q9ULH1 1129 aa21.96■■□□□ 1.11
LMBR1-213ENST00000454132 TMEM94Q12767 1356 aa21.96■■□□□ 1.11
LMBR1-213ENST00000454132 ZNF658Q5TYW1 1059 aaPredicted RBP21.96■■□□□ 1.11
LMBR1-213ENST00000454132 PAPD7Q5XG87 772 aaKnown RBP21.96■■□□□ 1.11
LMBR1-213ENST00000454132 FERMT2Q96AC1 680 aa21.96■■□□□ 1.11
LMBR1-213ENST00000454132 ABCC12Q96J65 1359 aa21.95■■□□□ 1.1
LMBR1-213ENST00000454132 WTIPA6NIX2 430 aaPredicted RBP21.95■■□□□ 1.1
LMBR1-213ENST00000454132 TUBBP07437 444 aa21.95■■□□□ 1.1
LMBR1-213ENST00000454132 NLRP5P59047 1200 aa21.95■■□□□ 1.1
LMBR1-213ENST00000454132 ALX1Q15699 326 aa21.95■■□□□ 1.1
LMBR1-213ENST00000454132 NFRKBQ6P4R8 1299 aa21.95■■□□□ 1.1
LMBR1-213ENST00000454132 CAPN6Q9Y6Q1 641 aa21.95■■□□□ 1.1
LMBR1-213ENST00000454132 MOCS3O95396 460 aa21.95■■□□□ 1.1
LMBR1-213ENST00000454132 STAT6P42226 847 aa21.95■■□□□ 1.1
LMBR1-213ENST00000454132 SPAG1Q07617 926 aa21.95■■□□□ 1.1
LMBR1-213ENST00000454132 GTPBP6O43824 516 aaPredicted RBP21.94■■□□□ 1.1
LMBR1-213ENST00000454132 IFIT1BQ5T764 474 aaKnown RBP21.94■■□□□ 1.1
LMBR1-213ENST00000454132 MMS22LQ6ZRQ5 1243 aa21.94■■□□□ 1.1
LMBR1-213ENST00000454132 HPS3Q969F9 1004 aa21.94■■□□□ 1.1
LMBR1-213ENST00000454132 RNF26Q9BY78 433 aaPredicted RBP21.94■■□□□ 1.1
LMBR1-213ENST00000454132 PKD1L3Q7Z443 1732 aa21.94■■□□□ 1.1
LMBR1-213ENST00000454132 PHRF1Q9P1Y6 1649 aaKnown RBP21.94■■□□□ 1.1
LMBR1-213ENST00000454132 NPY5RQ15761 445 aa21.94■■□□□ 1.1
LMBR1-213ENST00000454132 NLRP10Q86W26 655 aa21.94■■□□□ 1.1
LMBR1-213ENST00000454132 ESYT3A0FGR9 886 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 IPO7O95373 1038 aaKnown RBP21.93■■□□□ 1.1
LMBR1-213ENST00000454132 ARID4AP29374 1257 aaPredicted RBP21.93■■□□□ 1.1
LMBR1-213ENST00000454132 RNASE9P60153 205 aaKnown RBP21.93■■□□□ 1.1
LMBR1-213ENST00000454132 ATP2B2Q01814 1243 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 TYW1BQ6NUM6 668 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 FAM107BQ9H098 131 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 WDR17Q8IZU2 1322 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 MYO1FO00160 1098 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 ZNF263O14978 683 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 KRT14P02533 472 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 CYP7A1P22680 504 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 ATP2C1P98194 919 aaPredicted RBP21.93■■□□□ 1.1
LMBR1-213ENST00000454132 TBC1D8BQ0IIM8 1120 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 TRIM14Q14142 442 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 DNAJC7Q99615 494 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 ZSCAN5CA6NGD5 496 aaPredicted RBP21.93■■□□□ 1.1
LMBR1-213ENST00000454132 RASSF10A6NK89 507 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 LGALS16A8MUM7 142 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 HNRNPH1P31943 449 aaKnown RBP21.93■■□□□ 1.1
LMBR1-213ENST00000454132 CKAP4Q07065 602 aaKnown RBP21.93■■□□□ 1.1
LMBR1-213ENST00000454132 BRMS1Q9HCU9 246 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 FBXO3Q9UK99 471 aa21.93■■□□□ 1.1
LMBR1-213ENST00000454132 MYH10P35580 1976 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 MYH13Q9UKX3 1938 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 DYNLL1P63167 89 aaKnown RBP21.92■■□□□ 1.1
LMBR1-213ENST00000454132 APBA1Q02410 837 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 SEC23AQ15436 765 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 TTMPQ5BVD1 217 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 FAM47AQ5JRC9 791 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 GPKOWQ92917 476 aaPredicted RBP eCLIP21.92■■□□□ 1.18e-7■□□□□ 10.9
LMBR1-213ENST00000454132 CAPN11Q9UMQ6 739 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 CAPN7Q9Y6W3 813 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 UQCRFS1P1P0C7P4 283 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 KRT83P78385 493 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 PUM3Q15397 648 aaKnown RBP21.92■■□□□ 1.1
LMBR1-213ENST00000454132 MS4A14Q96JA4 679 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 MAGEC2Q9UBF1 373 aaPredicted RBP21.92■■□□□ 1.1
LMBR1-213ENST00000454132 GRIN2DO15399 1336 aa21.92■■□□□ 1.1
LMBR1-213ENST00000454132 MCM3P25205 808 aa21.91■■□□□ 1.1
LMBR1-213ENST00000454132 INPP5BP32019 993 aa21.91■■□□□ 1.1
LMBR1-213ENST00000454132 FUT2Q10981 343 aa21.91■■□□□ 1.1
LMBR1-213ENST00000454132 KCNV1Q6PIU1 500 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms