RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 GOLM1Q8NBJ4 401 aa4.35□□□□□ -1.71
LRCH3-209ENST00000452660 CNNM2Q9H8M5 875 aa4.35□□□□□ -1.71
LRCH3-209ENST00000452660 CNTD2Q9H8S5 307 aa4.35□□□□□ -1.71
LRCH3-209ENST00000452660 LUC7LQ9NQ29 371 aaKnown RBP4.35□□□□□ -1.71
LRCH3-209ENST00000452660 CNOT11Q9UKZ1 510 aaKnown RBP4.35□□□□□ -1.71
LRCH3-209ENST00000452660 SUPT16HQ9Y5B9 1047 aaKnown RBP4.35□□□□□ -1.71
LRCH3-209ENST00000452660 MEIS3P2A8K0S8 358 aa4.34□□□□□ -1.71
LRCH3-209ENST00000452660 TRIM13O60858 407 aa4.34□□□□□ -1.71
LRCH3-209ENST00000452660 USP2O75604 605 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-209ENST00000452660 VIPR1P32241 457 aa4.34□□□□□ -1.71
LRCH3-209ENST00000452660 AFF3P51826 1226 aaKnown RBP4.34□□□□□ -1.71
LRCH3-209ENST00000452660 RTP1P59025 263 aa4.34□□□□□ -1.71
LRCH3-209ENST00000452660 SSPNQ14714 243 aa4.34□□□□□ -1.71
LRCH3-209ENST00000452660 MZB1Q8WU39 189 aa4.34□□□□□ -1.71
LRCH3-209ENST00000452660 EAF1Q96JC9 268 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-209ENST00000452660 TEPSINQ96N21 525 aa4.34□□□□□ -1.71
LRCH3-209ENST00000452660 FOXP3Q9BZS1 431 aa4.34□□□□□ -1.71
LRCH3-209ENST00000452660 XYLT2Q9H1B5 865 aa4.34□□□□□ -1.71
LRCH3-209ENST00000452660 MRS2Q9HD23 443 aa4.34□□□□□ -1.71
LRCH3-209ENST00000452660 ACSL6Q9UKU0 697 aa4.34□□□□□ -1.71
LRCH3-209ENST00000452660 ZC3H12DA2A288 527 aaKnown RBP4.33□□□□□ -1.72
LRCH3-209ENST00000452660 TNFRSF10CO14798 259 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 GRIN3BO60391 1043 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 CLEC3AO75596 197 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 ZNF205O95201 554 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 SYPP08247 313 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 PI3P19957 117 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 ARSHQ5FYA8 562 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 AEBP1Q8IUX7 1158 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 SGPP1Q9BX95 441 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 TNFRSF12AQ9NP84 129 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 PCDHB14Q9Y5E9 798 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 TAF6LQ9Y6J9 622 aa4.33□□□□□ -1.72
LRCH3-209ENST00000452660 IRS2Q9Y4H2 1338 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 RBAK-RBAKDNI3L0D1 243 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 PRAMEF1O95521 474 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 EIF4A3P38919 411 aaKnown RBP4.32□□□□□ -1.72
LRCH3-209ENST00000452660 NR1I3Q14994 352 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 HSF5Q4G112 596 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-209ENST00000452660 INTS3Q68E01 1043 aaKnown RBP4.32□□□□□ -1.72
LRCH3-209ENST00000452660 OVOS1Q6IE37 1185 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 CNKSR3Q6P9H4 555 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 FBXL19Q6PCT2 694 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 NLRC3Q7RTR2 1065 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 TMC3Q7Z5M5 1100 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 FRMD5Q7Z6J6 570 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 SLCO6A1Q86UG4 719 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 FAM129CQ86XR2 697 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 NLGN1Q8N2Q7 840 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 LINC01356Q8N9X3 169 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 ATG4CQ96DT6 458 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 EPB41L4AQ9HCS5 686 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-209ENST00000452660 CHST7Q9NS84 486 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 KLHL14Q9P2G3 628 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 VTI1BQ9UEU0 232 aa4.32□□□□□ -1.72
LRCH3-209ENST00000452660 EFEMP2O95967 443 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 GSNP06396 782 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 ZNF165P49910 485 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 CDR1P51861 262 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 FAM160A1Q05DH4 1040 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 LDHDQ86WU2 507 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 TMEFF1Q8IYR6 380 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 TAB3Q8N5C8 712 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-209ENST00000452660 FBXO27Q8NI29 283 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 SMARCC1Q92922 1105 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-209ENST00000452660 DHRS1Q96LJ7 313 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 PLCD4Q9BRC7 762 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 SRRTQ9BXP5 876 aaKnown RBP4.31□□□□□ -1.72
LRCH3-209ENST00000452660 PRDM14Q9GZV8 571 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 BCL11AQ9H165 835 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 BRMS1Q9HCU9 246 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 KBTBD4Q9NVX7 518 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 ERVK13-1Q9NX77 482 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 JAG2Q9Y219 1238 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 PCDHB12Q9Y5F1 795 aa4.31□□□□□ -1.72
LRCH3-209ENST00000452660 MINDY4BA8MYZ0 360 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 CELA3BP08861 270 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 NME1P15531 152 aaKnown RBP4.3□□□□□ -1.72
LRCH3-209ENST00000452660 MAPKAPK2P49137 400 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 EPHB3P54753 998 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 CORO7P57737 925 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 CYP4F8P98187 520 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 ANKRD39Q53RE8 183 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 CYP2R1Q6VVX0 501 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 IGDCC3Q8IVU1 814 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 SLITRK4Q8IW52 837 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 NT5C1AQ9BXI3 368 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 PCDHA5Q9Y5H7 936 aa4.3□□□□□ -1.72
LRCH3-209ENST00000452660 SRGAP3O43295 1099 aa4.29□□□□□ -1.72
LRCH3-209ENST00000452660 IMPDH2P12268 514 aa4.29□□□□□ -1.72
LRCH3-209ENST00000452660 VAV1P15498 845 aa4.29□□□□□ -1.72
LRCH3-209ENST00000452660 IGFBP6P24592 240 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-209ENST00000452660 SNW1Q13573 536 aaKnown RBP4.29□□□□□ -1.72
LRCH3-209ENST00000452660 TARBP2Q15633 366 aaKnown RBP4.29□□□□□ -1.72
LRCH3-209ENST00000452660 ZFYVE27Q5T4F4 411 aa4.29□□□□□ -1.72
LRCH3-209ENST00000452660 HLA-DQA1Q5Y7H0 255 aa4.29□□□□□ -1.72
LRCH3-209ENST00000452660 SIRT2Q8IXJ6 389 aa4.29□□□□□ -1.72
LRCH3-209ENST00000452660 PANK1Q8TE04 598 aa4.29□□□□□ -1.72
LRCH3-209ENST00000452660 ZNF296Q8WUU4 475 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-209ENST00000452660 GPR55Q9Y2T6 319 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms