RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 BVESQ8NE79 360 aa5.91□□□□□ -1.46
VPS8-211ENST00000452140 PIWIL2Q8TC59 973 aaKnown RBP5.91□□□□□ -1.46
VPS8-211ENST00000452140 HSPA12BQ96MM6 686 aa5.91□□□□□ -1.46
VPS8-211ENST00000452140 KRTAP4-12Q9BQ66 201 aa5.91□□□□□ -1.46
VPS8-211ENST00000452140 ASCC2Q9H1I8 757 aaPredicted RBP5.91□□□□□ -1.46
VPS8-211ENST00000452140 EPN3Q9H201 632 aa5.91□□□□□ -1.46
VPS8-211ENST00000452140 CHST7Q9NS84 486 aa5.91□□□□□ -1.46
VPS8-211ENST00000452140 PIM2Q9P1W9 311 aa5.91□□□□□ -1.46
VPS8-211ENST00000452140 ZSWIM5Q9P217 1185 aa5.91□□□□□ -1.46
VPS8-211ENST00000452140 ZC3H7BQ9UGR2 993 aaKnown RBP5.91□□□□□ -1.46
VPS8-211ENST00000452140 AKT3Q9Y243 479 aa5.91□□□□□ -1.46
VPS8-211ENST00000452140 FHOD1Q9Y613 1164 aa5.91□□□□□ -1.46
VPS8-211ENST00000452140 KCNH1O95259 989 aa5.9□□□□□ -1.46
VPS8-211ENST00000452140 CTSKP43235 329 aa5.9□□□□□ -1.46
VPS8-211ENST00000452140 PPP2R2AP63151 447 aa5.9□□□□□ -1.46
VPS8-211ENST00000452140 SQSTM1Q13501 440 aa5.9□□□□□ -1.46
VPS8-211ENST00000452140 C2orf27AQ580R0 203 aa5.9□□□□□ -1.46
VPS8-211ENST00000452140 LRRC47Q8N1G4 583 aaKnown RBP5.9□□□□□ -1.46
VPS8-211ENST00000452140 SYTL5Q8TDW5 730 aaPredicted RBP5.9□□□□□ -1.46
VPS8-211ENST00000452140 THAP3Q8WTV1 239 aaPredicted RBP5.9□□□□□ -1.46
VPS8-211ENST00000452140 BTN2A2Q8WVV5 523 aa5.9□□□□□ -1.46
VPS8-211ENST00000452140 HDAC8Q9BY41 377 aa5.9□□□□□ -1.46
VPS8-211ENST00000452140 DUSP15Q9H1R2 295 aaPredicted RBP5.9□□□□□ -1.46
VPS8-211ENST00000452140 CWC22Q9HCG8 908 aaKnown RBP5.9□□□□□ -1.46
VPS8-211ENST00000452140 ARHGEF4Q9NR80 690 aa5.9□□□□□ -1.46
VPS8-211ENST00000452140 PTCH2Q9Y6C5 1203 aa5.9□□□□□ -1.46
VPS8-211ENST00000452140 IQCA1LA6NCM1 817 aa5.89□□□□□ -1.47
VPS8-211ENST00000452140 NOP56O00567 594 aaKnown RBP5.89□□□□□ -1.47
VPS8-211ENST00000452140 VAMP4O75379 141 aa5.89□□□□□ -1.47
VPS8-211ENST00000452140 IFI16Q16666 785 aaKnown RBP5.89□□□□□ -1.47
VPS8-211ENST00000452140 DPY19L1Q2PZI1 675 aa5.89□□□□□ -1.47
VPS8-211ENST00000452140 FOXB2Q5VYV0 432 aa5.89□□□□□ -1.47
VPS8-211ENST00000452140 ARHGEF39Q8N4T4 335 aa5.89□□□□□ -1.47
VPS8-211ENST00000452140 NETO1Q8TDF5 533 aa5.89□□□□□ -1.47
VPS8-211ENST00000452140 UBE2FQ969M7 185 aa5.89□□□□□ -1.47
VPS8-211ENST00000452140 ZNF669Q96BR6 464 aaPredicted RBP5.89□□□□□ -1.47
VPS8-211ENST00000452140 MRGPRX3Q96LB0 322 aa5.89□□□□□ -1.47
VPS8-211ENST00000452140 GPR62Q9BZJ7 368 aa5.89□□□□□ -1.47
VPS8-211ENST00000452140 FANCLQ9NW38 375 aa5.89□□□□□ -1.47
VPS8-211ENST00000452140 GPR55Q9Y2T6 319 aaPredicted RBP5.89□□□□□ -1.47
VPS8-211ENST00000452140 EMC9Q9Y3B6 208 aa5.89□□□□□ -1.47
VPS8-211ENST00000452140 SRFP11831 508 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 FOSL1P15407 271 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 TPP2P29144 1249 aaPredicted RBP5.88□□□□□ -1.47
VPS8-211ENST00000452140 L1CAMP32004 1257 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 CD96P40200 585 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 SF1Q15637 639 aaKnown RBP5.88□□□□□ -1.47
VPS8-211ENST00000452140 CPSF6Q16630 551 aaKnown RBP eCLIP5.88□□□□□ -1.47
VPS8-211ENST00000452140 MCTP1Q6DN14 999 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 TRIM59Q8IWR1 403 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 ZBTB38Q8NAP3 1195 aaPredicted RBP5.88□□□□□ -1.47
VPS8-211ENST00000452140 TCTN2Q96GX1 697 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 SGSM3Q96HU1 749 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 RCC1LQ96I51 464 aaKnown RBP5.88□□□□□ -1.47
VPS8-211ENST00000452140 MKNK2Q9HBH9 465 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 GOLGA2P5Q9HBQ8 144 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 ATP13A1Q9HD20 1204 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 GPATCH2Q9NW75 528 aa5.88□□□□□ -1.47
VPS8-211ENST00000452140 A0A087WZG4 1122 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 BTBD11A6QL63 1104 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 STXBP3O00186 592 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 PAX4O43316 350 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 FKTNO75072 461 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 CDC45O75419 566 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 CD3EP07766 207 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 CLCN7P51798 805 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 HSP90AA2PQ14568 343 aaPredicted RBP5.87□□□□□ -1.47
VPS8-211ENST00000452140 FAM209AQ5JX71 171 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 GTF2IRD2BQ6EKJ0 949 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 GTF2IRD2Q86UP8 949 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 TSPYL5Q86VY4 417 aaPredicted RBP5.87□□□□□ -1.47
VPS8-211ENST00000452140 JMYQ8N9B5 988 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 DAGLBQ8NCG7 672 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 EXOC2Q96KP1 924 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 MCMBPQ9BTE3 642 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 AARSD1Q9BTE6 412 aaKnown RBP5.87□□□□□ -1.47
VPS8-211ENST00000452140 IER2Q9BTL4 223 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 TRIT1Q9H3H1 467 aaKnown RBP5.87□□□□□ -1.47
VPS8-211ENST00000452140 SEMA3GQ9NS98 782 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 PRR13Q9NZ81 148 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 DIS3Q9Y2L1 958 aaKnown RBP5.87□□□□□ -1.47
VPS8-211ENST00000452140 SF3B6Q9Y3B4 125 aaKnown RBP5.87□□□□□ -1.47
VPS8-211ENST00000452140 CADPSQ9ULU8 1353 aa5.87□□□□□ -1.47
VPS8-211ENST00000452140 PITPNM2Q9BZ72 1349 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 TRAV20A0A0B4J274 112 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 PRODHO43272 600 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 SYPP08247 313 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 IFNGR1P15260 489 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 SSTR4P31391 388 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 KCNJ6P48051 423 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 CD97P48960 835 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 AMPD2Q01433 879 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 CWF19L1Q69YN2 538 aaKnown RBP5.86□□□□□ -1.47
VPS8-211ENST00000452140 POMZP3Q6PJE2 187 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 ZNF662Q6ZS27 426 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 CRACR2BQ8N4Y2 399 aaPredicted RBP5.86□□□□□ -1.47
VPS8-211ENST00000452140 ZNF655Q8N720 491 aaPredicted RBP5.86□□□□□ -1.47
VPS8-211ENST00000452140 CDC6Q99741 560 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 FOXP3Q9BZS1 431 aa5.86□□□□□ -1.47
VPS8-211ENST00000452140 TMEM260Q9NX78 707 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms