RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 CNKSR2Q8WXI2 1034 aa13.79□□□□□ -0.2
SCAP-208ENST00000448217 RRP36Q96EU6 259 aaKnown RBP13.79□□□□□ -0.2
SCAP-208ENST00000448217 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
SCAP-208ENST00000448217 WNK4Q96J92 1243 aa13.79□□□□□ -0.2
SCAP-208ENST00000448217 NUP88Q99567 741 aaPredicted RBP13.79□□□□□ -0.2
SCAP-208ENST00000448217 UBA5Q9GZZ9 404 aa13.79□□□□□ -0.2
SCAP-208ENST00000448217 SH3GLB2Q9NR46 395 aa13.79□□□□□ -0.2
SCAP-208ENST00000448217 TMOD4Q9NZQ9 345 aa13.79□□□□□ -0.2
SCAP-208ENST00000448217 MTMR7Q9Y216 660 aa13.79□□□□□ -0.2
SCAP-208ENST00000448217 MYPNQ86TC9 1320 aa13.79□□□□□ -0.2
SCAP-208ENST00000448217 PNMA6FA0A0J9YX94 578 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 ZBTB5O15062 677 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 STX6O43752 255 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 BRD1O95696 1058 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 HOXA7P31268 230 aaPredicted RBP13.78□□□□□ -0.2
SCAP-208ENST00000448217 GJA5P36382 358 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 SNAPC2Q13487 334 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 MOGSQ13724 837 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 ZYXQ15942 572 aaKnown RBP13.78□□□□□ -0.2
SCAP-208ENST00000448217 FASTKD5Q7L8L6 764 aaKnown RBP13.78□□□□□ -0.2
SCAP-208ENST00000448217 SAPCD2Q86UD0 394 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 CCDC82Q8N4S0 544 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 PRPF38AQ8NAV1 312 aaKnown RBP13.78□□□□□ -0.2
SCAP-208ENST00000448217 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 ALG1Q9BT22 464 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 PRR12Q9ULL5 1215 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 ADAMTS5Q9UNA0 930 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 TLL2Q9Y6L7 1015 aa13.78□□□□□ -0.2
SCAP-208ENST00000448217 USP17L15C9J2P7 530 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 USP17L13C9JLJ4 530 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 USP17L11C9JVI0 530 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 USP17L18D6R9N7 530 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 USP17L22D6RA61 530 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 USP17L17D6RBQ6 530 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 USP17L19D6RCP7 530 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 USP17L20D6RJB6 530 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 SLC16A2P36021 539 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 HUNKP57058 714 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 USP17L24Q0WX57 530 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 SPRYD7Q5W111 196 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 CATSPERGQ6ZRH7 1159 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 TEX2Q8IWB9 1127 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 C8orf76Q96K31 380 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 PIGSQ96S52 555 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 SLF1Q9BQI6 1058 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 WDR33Q9C0J8 1336 aaKnown RBP13.77□□□□□ -0.21
SCAP-208ENST00000448217 RANBP17Q9H2T7 1088 aaKnown RBP13.77□□□□□ -0.21
SCAP-208ENST00000448217 CPVLQ9H3G5 476 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 RPAP3Q9H6T3 665 aaPredicted RBP13.77□□□□□ -0.21
SCAP-208ENST00000448217 SEC63Q9UGP8 760 aaKnown RBP13.77□□□□□ -0.21
SCAP-208ENST00000448217 PNMA2Q9UL42 364 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 PPP1R9AQ9ULJ8 1098 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 MTMR6Q9Y217 621 aa13.77□□□□□ -0.21
SCAP-208ENST00000448217 ESYT2A0FGR8 921 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 TMEM88BA6NKF7 163 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 RAD21O60216 631 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 XBP1P17861 261 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 GTF2A2P52657 109 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 TRAF1Q13077 416 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 PPP1R18Q6NYC8 613 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 BARHL2Q9NY43 387 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 SLC45A1Q9Y2W3 748 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 ZDHHC9Q9Y397 364 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 A0A0G2JMZ2 1700 aa13.76□□□□□ -0.21
SCAP-208ENST00000448217 TESPA1A2RU30 521 aaPredicted RBP13.75□□□□□ -0.21
SCAP-208ENST00000448217 DTNBO60941 627 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 PPFIA3O75145 1194 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 CETPP11597 493 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 DSG3P32926 999 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 DGKZQ13574 1117 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 COG2Q14746 738 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 CDC37Q16543 378 aaPredicted RBP13.75□□□□□ -0.21
SCAP-208ENST00000448217 QRICH1Q2TAL8 776 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 KRT40Q6A162 431 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 GALNT17Q6IS24 598 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 RGMBQ6NW40 437 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 LBX2Q6XYB7 198 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 CCDC12Q8WUD4 166 aaPredicted RBP13.75□□□□□ -0.21
SCAP-208ENST00000448217 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 AIFM3Q96NN9 605 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 PHF20Q9BVI0 1012 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 FBXO28Q9NVF7 368 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 HOXC10Q9NYD6 342 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 AGTPBP1Q9UPW5 1226 aa13.75□□□□□ -0.21
SCAP-208ENST00000448217 hCG_1642624A0A1W2PR95 340 aa13.74□□□□□ -0.21
SCAP-208ENST00000448217 STXBP3O00186 592 aa13.74□□□□□ -0.21
SCAP-208ENST00000448217 ATP2A1O14983 1001 aa13.74□□□□□ -0.21
SCAP-208ENST00000448217 PPP1R11O60927 126 aaPredicted RBP13.74□□□□□ -0.21
SCAP-208ENST00000448217 ZSCAN22P10073 491 aaPredicted RBP13.74□□□□□ -0.21
SCAP-208ENST00000448217 OAZ1P54368 228 aa13.74□□□□□ -0.21
SCAP-208ENST00000448217 PABPC4Q13310 644 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCAP-208ENST00000448217 PKP1Q13835 747 aa13.74□□□□□ -0.21
SCAP-208ENST00000448217 TRIM29Q14134 588 aa13.74□□□□□ -0.21
SCAP-208ENST00000448217 WWC2Q6AWC2 1192 aa13.74□□□□□ -0.21
SCAP-208ENST00000448217 GPAT2Q6NUI2 795 aa13.74□□□□□ -0.21
SCAP-208ENST00000448217 RASAL3Q86YV0 1011 aa13.74□□□□□ -0.21
SCAP-208ENST00000448217 DAGLBQ8NCG7 672 aa13.74□□□□□ -0.21
SCAP-208ENST00000448217 CCDC148Q8NFR7 591 aa13.74□□□□□ -0.21
SCAP-208ENST00000448217 AMNQ9BXJ7 453 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms