RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CCNT1O60563 726 aaKnown RBP20.48■□□□□ 0.87
SHANK3-203ENST00000445220 BCRP11274 1271 aa20.48■□□□□ 0.87
SHANK3-203ENST00000445220 ATP5JP18859 108 aa20.48■□□□□ 0.87
SHANK3-203ENST00000445220 SLFNL1Q499Z3 407 aa20.48■□□□□ 0.87
SHANK3-203ENST00000445220 TEX11Q8IYF3 940 aa20.48■□□□□ 0.87
SHANK3-203ENST00000445220 CNBD1Q8NA66 436 aa20.48■□□□□ 0.87
SHANK3-203ENST00000445220 LRWD1Q9UFC0 647 aa20.48■□□□□ 0.87
SHANK3-203ENST00000445220 CLEC11AQ9Y240 323 aa20.48■□□□□ 0.87
SHANK3-203ENST00000445220 RIMBP3CA6NJZ7 1639 aa20.48■□□□□ 0.87
SHANK3-203ENST00000445220 RIMBP3BA6NNM3 1639 aa20.48■□□□□ 0.87
SHANK3-203ENST00000445220 RIMBP3Q9UFD9 1639 aa20.48■□□□□ 0.87
SHANK3-203ENST00000445220 GNPATO15228 680 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 TXKP42681 527 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 CASP8Q14790 479 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 CFAP74Q9C0B2 1584 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 MROH5Q6ZUA9 1318 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 BIRC3Q13489 604 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 SH2D4AQ9H788 454 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 TPCN1Q9ULQ1 816 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 SSH3Q8TE77 659 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 ATP2A3Q93084 1043 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 KIFC2Q96AC6 838 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 DSCC1Q9BVC3 393 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 MAGI3Q5TCQ9 1506 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 ERVV-2B6SEH9 535 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 BUB1O43683 1085 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 FNBP1Q96RU3 617 aa20.47■□□□□ 0.87
SHANK3-203ENST00000445220 NPHP4O75161 1426 aaPredicted RBP20.47■□□□□ 0.87
SHANK3-203ENST00000445220 FBXO41Q8TF61 875 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 PFKFB2O60825 505 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 NDUFA8P51970 172 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 RNASELQ05823 741 aaKnown RBP20.46■□□□□ 0.87
SHANK3-203ENST00000445220 GRK7Q8WTQ7 553 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 ADAM21Q9UKJ8 722 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 KCNJ14Q9UNX9 436 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 RASA3Q14644 834 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 KLHDC4Q8TBB5 520 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 MAST3O60307 1309 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 FAM135BQ49AJ0 1406 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 POLE2P56282 527 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 SLMAPQ14BN4 828 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 ZNF496Q96IT1 587 aaPredicted RBP20.46■□□□□ 0.87
SHANK3-203ENST00000445220 RUNDC3BQ96NL0 473 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 CCDC87Q9NVE4 849 aa20.46■□□□□ 0.87
SHANK3-203ENST00000445220 HIBCHQ6NVY1 386 aaPredicted RBP20.45■□□□□ 0.86
SHANK3-203ENST00000445220 CABP7Q86V35 215 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 LRRC8CQ8TDW0 803 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 SNX29Q8TEQ0 813 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 LSM14BQ9BX40 385 aaKnown RBP20.45■□□□□ 0.86
SHANK3-203ENST00000445220 PFDN4Q9NQP4 134 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 TYW1Q9NV66 732 aaKnown RBP20.45■□□□□ 0.86
SHANK3-203ENST00000445220 PHBP35232 272 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 U2AF1L4Q8WU68 220 aaKnown RBP20.45■□□□□ 0.86
SHANK3-203ENST00000445220 FAM212AQ96EL1 285 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 ERBB4Q15303 1308 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 AATKQ6ZMQ8 1374 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 EIF3CLB5ME19 914 aaKnown RBP20.45■□□□□ 0.86
SHANK3-203ENST00000445220 E7EWF7 191 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 MGEA5O60502 916 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 A1BGP04217 495 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 SKIP12755 728 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 DYMQ7RTS9 669 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 KRT25Q7Z3Z0 450 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 CCHCR1Q8TD31 782 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 EIF3CQ99613 913 aaKnown RBP20.45■□□□□ 0.86
SHANK3-203ENST00000445220 ARMT1Q9H993 441 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 KDM5DQ9BY66 1539 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 MBD5Q9P267 1494 aa20.45■□□□□ 0.86
SHANK3-203ENST00000445220 CASP14P31944 242 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 RAD51AP2Q09MP3 1159 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 GRM1Q13255 1194 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 NONOQ15233 471 aaKnown RBP eCLIP20.44■□□□□ 0.86
SHANK3-203ENST00000445220 ALS2CLQ60I27 953 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 THAP12O43422 761 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 IFNAR2P48551 515 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 IL9RQ01113 521 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 NNTQ13423 1086 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 ZNF827Q17R98 1081 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 PPP4R1Q8TF05 950 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 CNOT10Q9H9A5 744 aaKnown RBP20.44■□□□□ 0.86
SHANK3-203ENST00000445220 MAGI2Q86UL8 1455 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 STAT1P42224 750 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 PRR16Q569H4 304 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.44■□□□□ 0.86
SHANK3-203ENST00000445220 SAAL1Q96ER3 474 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 TRIM6Q9C030 488 aaPredicted RBP20.44■□□□□ 0.86
SHANK3-203ENST00000445220 RIC8AQ9NPQ8 531 aa20.44■□□□□ 0.86
SHANK3-203ENST00000445220 NEURL1BA8MQ27 555 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 NOSTRINQ8IVI9 506 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 KRT12Q99456 494 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 TSC22D3Q99576 134 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 STK24Q9Y6E0 443 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 STK10O94804 968 aaKnown RBP20.43■□□□□ 0.86
SHANK3-203ENST00000445220 KDRP35968 1356 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 KAT6BQ8WYB5 2073 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 ENC1O14682 589 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 GABPB2Q8TAK5 448 aaPredicted RBP20.43■□□□□ 0.86
SHANK3-203ENST00000445220 HINFPQ9BQA5 517 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 MYL10Q9BUA6 226 aa20.43■□□□□ 0.86
SHANK3-203ENST00000445220 CTNND1O60716 968 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms