RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 ZNF213O14771 459 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 NDC80O14777 642 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 MCF2LO15068 1137 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 SKAP2O75563 359 aaPredicted RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 SASH1O94885 1247 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 TRIM37O94972 964 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 CPA1P15085 419 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 UBA7P41226 1012 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 STAT6P42226 847 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 NOP14P78316 857 aaKnown RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 CUL1Q13616 776 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 SLC9C1Q4G0N8 1177 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 OTUD7AQ8TE49 926 aaPredicted RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 ZHX3Q9H4I2 956 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 EPB41L5Q9HCM4 733 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 TCP11L1Q9NUJ3 509 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 NDUFA13Q9P0J0 144 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 NOVA2Q9UNW9 492 aaKnown RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 DCTN3O75935 186 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 ZRANB2O95218 330 aaKnown RBP eCLIP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 ANP32DO95626 131 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 KCNA6P17658 529 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 VCAM1P19320 739 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 LSP1P33241 339 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 MRPL12P52815 198 aaKnown RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 C2orf54Q08AI8 447 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 ME3Q16798 604 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 SLC4A8Q2Y0W8 1093 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 DPCR1Q3MIW9 517 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 BEND6Q5SZJ8 279 aaPredicted RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 NAA35Q5VZE5 725 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 LRRC43Q8N309 656 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 DNAJC9Q8WXX5 260 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 RIMS1Q86UR5 1692 aaKnown RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 TRIM75PA6NK02 468 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 H3BQF6 201 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 KRT75O95678 551 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 MYBL2P10244 700 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 PFKFB1P16118 471 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 SERPINB4P48594 390 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 PLCD1P51178 756 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 NMIQ13287 307 aaPredicted RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 PPP1R42Q7Z4L9 355 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 WDR75Q8IWA0 830 aaKnown RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 SCYL3Q8IZE3 742 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 MSL3Q8N5Y2 521 aaKnown RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 PSMB7Q99436 277 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 ELAC2Q9BQ52 826 aaKnown RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 C14orf93Q9H972 538 aaKnown RBP5.65□□□□□ -1.5
SCN11A-202ENST00000444237 CCDC87Q9NVE4 849 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 CD2APQ9Y5K6 639 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 CDC42BPBQ9Y5S2 1711 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 NPHP4O75161 1426 aaPredicted RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 GLI2P10070 1586 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 F6X3S4 739 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 LIN7AO14910 233 aaPredicted RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 KDM1AO60341 852 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 DKC1O60832 514 aaKnown RBP eCLIP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 ATP5JP18859 108 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 SERPINB3P29508 390 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 TPD52P55327 224 aaPredicted RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 RCN2Q14257 317 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 TTF1Q15361 905 aaPredicted RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 C6orf118Q5T5N4 469 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 OLFML2BQ68BL8 750 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 ARHGEF18Q6ZSZ5 1173 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 NUDCD1Q96RS6 583 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 EIF2AQ9BY44 585 aaKnown RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 CARD9Q9H257 536 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 DLGAP2Q9P1A6 1054 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 PALD1Q9ULE6 856 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 C15orf41Q9Y2V0 281 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 SH3BP1Q9Y3L3 701 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 SOS1Q07889 1333 aaPredicted RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 MBD5Q9P267 1494 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 EIF2AK4Q9P2K8 1649 aaKnown RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 ENC1O14682 589 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 MAPK13O15264 365 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 VAMP4O75379 141 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 MMEP08473 750 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 ERCC5P28715 1186 aaPredicted RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 MSH2P43246 934 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 IFNAR2P48551 515 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 PPARDQ03181 441 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 LMNB2Q03252 620 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 SNX1Q13596 522 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 RRS1Q15050 365 aaKnown RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 TAF7Q15545 349 aaPredicted RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 PRR16Q569H4 304 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 SPATA1Q5VX52 437 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 C16orf87Q6PH81 154 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 CALML4Q96GE6 196 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 CATSPER2Q96P56 530 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 CDC5LQ99459 802 aaKnown RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 DDX23Q9BUQ8 820 aaKnown RBP5.65□□□□□ -1.51
SCN11A-202ENST00000444237 ANKRD2Q9GZV1 360 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 TBC1D23Q9NUY8 699 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 TAB2Q9NYJ8 693 aa5.65□□□□□ -1.51
SCN11A-202ENST00000444237 IL1RAPL1Q9NZN1 696 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms