RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 LONRF2Q1L5Z9 754 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 C4orf32Q8N8J7 132 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 RASSF8Q8NHQ8 419 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 TFCP2L1Q9NZI6 479 aa18.59■□□□□ 0.57
SEMA3B-207ENST00000441915 OAS2P29728 719 aaKnown RBP18.58■□□□□ 0.57
SEMA3B-207ENST00000441915 TMED8Q6PL24 325 aaPredicted RBP18.58■□□□□ 0.57
SEMA3B-207ENST00000441915 DTHD1Q6ZMT9 781 aa18.58■□□□□ 0.57
SEMA3B-207ENST00000441915 NAPGQ99747 312 aaPredicted RBP18.58■□□□□ 0.57
SEMA3B-207ENST00000441915 SLC10A5Q5PT55 438 aa18.58■□□□□ 0.56
SEMA3B-207ENST00000441915 DGKHQ86XP1 1220 aa18.58■□□□□ 0.56
SEMA3B-207ENST00000441915 LAMB1P07942 1786 aa18.58■□□□□ 0.56
SEMA3B-207ENST00000441915 CCDC194A0A1B0GVG4 234 aa18.58■□□□□ 0.56
SEMA3B-207ENST00000441915 RNF225M0QZC1 329 aaPredicted RBP18.58■□□□□ 0.56
SEMA3B-207ENST00000441915 TFAP4Q01664 338 aa18.58■□□□□ 0.56
SEMA3B-207ENST00000441915 PLCD3Q8N3E9 789 aa18.58■□□□□ 0.56
SEMA3B-207ENST00000441915 PNMA1Q8ND90 353 aa18.58■□□□□ 0.56
SEMA3B-207ENST00000441915 GPKOWQ92917 476 aaPredicted RBP eCLIP18.58■□□□□ 0.56
SEMA3B-207ENST00000441915 FAM205AQ6ZU69 1335 aa18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 HNRNPLLQ8WVV9 542 aaKnown RBP18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 NLRP3Q96P20 1036 aa18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 ANKRD2Q9GZV1 360 aa18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 ANKZF1Q9H8Y5 726 aa18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 PIP4K2BP78356 416 aa18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 SLC20A2Q08357 652 aa18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 SLC4A8Q2Y0W8 1093 aa18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 ADSSL1Q8N142 457 aa18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 RASGRP4Q8TDF6 673 aa18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 SLF1Q9BQI6 1058 aa18.57■□□□□ 0.56
SEMA3B-207ENST00000441915 PARP1P09874 1014 aaKnown RBP18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 NT5C2P49902 561 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 GNAQP50148 359 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 STIM1Q13586 685 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 DZIP1Q86YF9 867 aaKnown RBP18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 ERLIN1O75477 346 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 ABL1P00519 1130 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 MYL1P05976 194 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 USP17L8P0C7I0 530 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 UBA7P41226 1012 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 WHAMMP3Q1A5X7 153 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 STAG2Q8N3U4 1231 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 MSANTD4Q8NCY6 345 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 ZCCHC17Q9NP64 241 aaKnown RBP18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 CALCOCO1Q9P1Z2 691 aa18.56■□□□□ 0.56
SEMA3B-207ENST00000441915 TRIM49BA6NDI0 452 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 ARHGAP25P42331 645 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 KCNB1Q14721 858 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 TBC1D9BQ66K14 1250 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 CCDC148Q8NFR7 591 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 IL17RBQ9NRM6 502 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 RAB21Q9UL25 225 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 EPN1Q9Y6I3 576 aaPredicted RBP18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 CTAGE15A4D2H0 777 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 KCNQ2O43526 872 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 CTAGE8P0CG41 777 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 EEF1GP26641 437 aaKnown RBP18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 GPS2Q13227 327 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 NAALADL2Q58DX5 795 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 SPTY2D1Q68D10 685 aaPredicted RBP18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 CTAGE6Q86UF2 777 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 IRF2BP1Q8IU81 584 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 CTAGE4Q8IX94 777 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 OR8K1Q8NGG5 319 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 NYXQ9GZU5 481 aa18.55■□□□□ 0.56
SEMA3B-207ENST00000441915 KIAA1551Q9HCM1 1747 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 PES1O00541 588 aaKnown RBP18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 MAP2K7O14733 419 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 NDUFA10O95299 355 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 USP5P45974 858 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 TSR1Q2NL82 804 aaKnown RBP18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 MB21D1Q8N884 522 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 LINC00116Q8NCU8 138 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 CHP1Q99653 195 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 MKNK2Q9HBH9 465 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 JAG2Q9Y219 1238 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 LUC7L2Q9Y383 392 aaKnown RBP18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 A0A1W2PQC6 194 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 TTC26A0AVF1 554 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 M0R2N6 131 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 PSMA7O14818 248 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 CCDC178Q5BJE1 867 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 C12orf60Q5U649 245 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 GALNT17Q6IS24 598 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 TYW1BQ6NUM6 668 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 CCDC88AQ3V6T2 1871 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 CASZ1Q86V15 1759 aa18.54■□□□□ 0.56
SEMA3B-207ENST00000441915 LGALS16A8MUM7 142 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 SEMA3FQ13275 785 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 GRM4Q14833 912 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 BEND6Q5SZJ8 279 aaPredicted RBP18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 ANKS1AQ92625 1134 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 TRIM47Q96LD4 638 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 THAP9Q9H5L6 903 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 PCDHA6Q9UN73 950 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 PCDHA8Q9Y5H6 950 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 LAD1O00515 517 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 INF2Q27J81 1249 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 PNKPQ96T60 521 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 CCSER1Q9C0I3 900 aa18.53■□□□□ 0.56
SEMA3B-207ENST00000441915 TMEM60Q9H2L4 133 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms